Commit message (Collapse) | Author | Age | Files | Lines | |
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* | sci-biology/allpathslg: Version bump, fix compilation errors with gcc-4.7, ↵ | Justin Lecher | 2012-07-09 | 1 | -11/+14 |
| | | | | | | #425472 (Portage version: 2.2.0_alpha116/cvs/Linux x86_64, signed Manifest commit with key 70EB7916) | ||||
* | sci-biology/allpathslg: Version bump, fix compilation errors with gcc-4.7, ↵ | Justin Lecher | 2012-07-09 | 2 | -1/+40 |
| | | | | | | #425472 (Portage version: 2.2.0_alpha116/cvs/Linux x86_64) | ||||
* | sci-biology/mira: Drop old | Justin Lecher | 2012-07-08 | 1 | -10/+17 |
| | | | | (Portage version: 2.2.0_alpha116/cvs/Linux x86_64, signed Manifest commit with key 70EB7916) | ||||
* | sci-biology/mira: Drop old | Justin Lecher | 2012-07-08 | 3 | -103/+5 |
| | | | | (Portage version: 2.2.0_alpha116/cvs/Linux x86_64) | ||||
* | sci-biology/amos: Add fix for gcc-4.7, #425264; cleaned old | Justin Lecher | 2012-07-08 | 1 | -16/+11 |
| | | | | (Portage version: 2.2.0_alpha116/cvs/Linux x86_64, signed Manifest commit with key 70EB7916) | ||||
* | sci-biology/amos: Add fix for gcc-4.7, #425264; cleaned old | Justin Lecher | 2012-07-08 | 7 | -218/+32 |
| | | | | (Portage version: 2.2.0_alpha116/cvs/Linux x86_64) | ||||
* | sci-biology/seaview: Version Bump imported from sci overlay, prepared by ↵ | Justin Lecher | 2012-07-04 | 1 | -10/+13 |
| | | | | | | Martin Mokrejs, #351005; fixes also compilation with gcc47, #424727 (Portage version: 2.2.0_alpha115/cvs/Linux x86_64, signed Manifest commit with key 70EB7916) | ||||
* | sci-biology/seaview: Version Bump imported from sci overlay, prepared by ↵ | Justin Lecher | 2012-07-04 | 2 | -2/+79 |
| | | | | | | Martin Mokrejs, #351005; fixes also compilation with gcc47, #424727 (Portage version: 2.2.0_alpha115/cvs/Linux x86_64) | ||||
* | sci-biology/plink: Moved to EAPI=4, add fix for building with gcc-4.7, #424709 | Justin Lecher | 2012-07-04 | 1 | -6/+18 |
| | | | | (Portage version: 2.2.0_alpha115/cvs/Linux x86_64, signed Manifest commit with key 70EB7916) | ||||
* | sci-biology/plink: Moved to EAPI=4, add fix for building with gcc-4.7, #424709 | Justin Lecher | 2012-07-04 | 3 | -10/+79 |
| | | | | (Portage version: 2.2.0_alpha115/cvs/Linux x86_64) | ||||
* | sci-biology/hmmer: Fix the patch, thanks xarthisius and bonsaikitten for help | Justin Lecher | 2012-06-28 | 1 | -6/+6 |
| | | | | (Portage version: 2.2.0_alpha114/cvs/Linux x86_64, signed Manifest commit with key 70EB7916) | ||||
* | sci-biology/hmmer: Fix the patch, thanks xarthisius and bonsaikitten for help | Justin Lecher | 2012-06-28 | 3 | -136/+8 |
| | | | | (Portage version: 2.2.0_alpha114/cvs/Linux x86_64) | ||||
* | next patch | Justin Lecher | 2012-06-28 | 1 | -0/+132 |
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* | next try | Justin Lecher | 2012-06-28 | 1 | -5/+5 |
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* | Plain patch | Justin Lecher | 2012-06-28 | 1 | -5/+5 |
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* | Fix patch | Justin Lecher | 2012-06-28 | 1 | -5/+5 |
| | | | | (Portage version: 2.2.0_alpha114/cvs/Linux x86_64, signed Manifest commit with key 70EB7916) | ||||
* | Fix patch | Justin Lecher | 2012-06-28 | 2 | -10/+6 |
| | | | | (Portage version: 2.2.0_alpha114/cvs/Linux x86_64) | ||||
* | fix patch again | Justin Lecher | 2012-06-28 | 1 | -5/+5 |
| | | | | (Portage version: 2.2.0_alpha114/cvs/Linux x86_64, signed Manifest commit with key 70EB7916) | ||||
* | fix patch again | Justin Lecher | 2012-06-28 | 2 | -6/+10 |
| | | | | (Portage version: 2.2.0_alpha114/cvs/Linux x86_64) | ||||
* | sci-biology/hmmer: Fix patch, screwed VCS tags, #423983 | Justin Lecher | 2012-06-28 | 1 | -5/+5 |
| | | | | (Portage version: 2.2.0_alpha114/cvs/Linux x86_64, signed Manifest commit with key 70EB7916) | ||||
* | sci-biology/hmmer: Fix patch, screwed VCS tags, #423983 | Justin Lecher | 2012-06-28 | 2 | -8/+15 |
| | | | | (Portage version: 2.2.0_alpha114/cvs/Linux x86_64) | ||||
* | whitespace | Michael Sterrett | 2012-06-25 | 1 | -1/+1 |
| | | | | (Portage version: 2.1.10.49/cvs/Linux x86_64, unsigned Manifest commit) | ||||
* | whitespace | Michael Sterrett | 2012-06-25 | 1 | -2/+2 |
| | | | | (Portage version: 2.1.10.49/cvs/Linux x86_64) | ||||
* | marked x86 per bug 418439 | Jeff Horelick | 2012-06-25 | 1 | -16/+2 |
| | | | | (Portage version: 2.2.0_alpha112/cvs/Linux i686, unsigned Manifest commit) | ||||
* | marked x86 per bug 418439 | Jeff Horelick | 2012-06-25 | 2 | -3/+6 |
| | | | | (Portage version: 2.2.0_alpha112/cvs/Linux i686) | ||||
* | sci-biology/vaal: Version Bump | Justin Lecher | 2012-06-25 | 1 | -4/+6 |
| | | | | (Portage version: 2.2.0_alpha112/cvs/Linux x86_64, signed Manifest commit with key 70EB7916) | ||||
* | sci-biology/vaal: Version Bump | Justin Lecher | 2012-06-25 | 2 | -1/+48 |
| | | | | (Portage version: 2.2.0_alpha112/cvs/Linux x86_64) | ||||
* | sci-biology/vaal: Drop old, #309127; Handle openmp, don't install license | Justin Lecher | 2012-06-25 | 1 | -19/+8 |
| | | | | (Portage version: 2.2.0_alpha112/cvs/Linux x86_64, signed Manifest commit with key 70EB7916) | ||||
* | sci-biology/vaal: Drop old, #309127; Handle openmp, don't install license | Justin Lecher | 2012-06-25 | 4 | -54/+30 |
| | | | | (Portage version: 2.2.0_alpha112/cvs/Linux x86_64) | ||||
* | Fix building with gcc-4.7 wrt #423497 by Diego Elio Pettenò ↵ | Kacper Kowalik | 2012-06-25 | 1 | -18/+19 |
| | | | | | | <flameeyes@gentoo.org>, drop -O3 -ggdb from CXXFLAGS (Portage version: 2.2.0_alpha110/cvs/Linux x86_64, signed Manifest commit with key 895192F9) | ||||
* | Fix building with gcc-4.7 wrt #423497 by Diego Elio Pettenò ↵ | Kacper Kowalik | 2012-06-25 | 4 | -6/+166 |
| | | | | | | <flameeyes@gentoo.org>, drop -O3 -ggdb from CXXFLAGS (Portage version: 2.2.0_alpha110/cvs/Linux x86_64) | ||||
* | sci-biology/infernal: Fix for perl-5.16, #422561; move to EAPI=4 | Justin Lecher | 2012-06-25 | 1 | -16/+8 |
| | | | | (Portage version: 2.2.0_alpha110/cvs/Linux x86_64, signed Manifest commit with key 70EB7916) | ||||
* | sci-biology/infernal: Fix for perl-5.16, #422561; move to EAPI=4 | Justin Lecher | 2012-06-25 | 3 | -11/+159 |
| | | | | (Portage version: 2.2.0_alpha110/cvs/Linux x86_64) | ||||
* | sci-biology/hmmer: Fix for build with perl-5.16, #421799; handle static-libs | Justin Lecher | 2012-06-25 | 1 | -8/+10 |
| | | | | (Portage version: 2.2.0_alpha110/cvs/Linux x86_64, signed Manifest commit with key 70EB7916) | ||||
* | sci-biology/hmmer: Fix for build with perl-5.16, #421799; handle static-libs | Justin Lecher | 2012-06-25 | 4 | -18/+155 |
| | | | | (Portage version: 2.2.0_alpha110/cvs/Linux x86_64) | ||||
* | Stable for amd64, wrt bug #418439 | Agostino Sarubbo | 2012-06-24 | 1 | -16/+10 |
| | | | | (Portage version: 2.1.10.65/cvs/Linux x86_64, signed Manifest commit with key 7CD2DC5D) | ||||
* | Stable for amd64, wrt bug #418439 | Agostino Sarubbo | 2012-06-24 | 2 | -3/+6 |
| | | | | (Portage version: 2.1.10.65/cvs/Linux x86_64) | ||||
* | Don't install docs that are no longer there, thanks to David Abbott for the ↵ | Kacper Kowalik | 2012-06-23 | 1 | -7/+17 |
| | | | | | | patch (Portage version: 2.2.0_alpha110/cvs/Linux x86_64, signed Manifest commit with key 895192F9) | ||||
* | Don't install docs that are no longer there, thanks to David Abbott for the ↵ | Kacper Kowalik | 2012-06-23 | 2 | -14/+23 |
| | | | | | | patch (Portage version: 2.2.0_alpha110/cvs/Linux x86_64) | ||||
* | sci-biology/bioperl-db: Add missing DEP on dev-perl/DBD-mysql, #422999 | Justin Lecher | 2012-06-23 | 1 | -6/+7 |
| | | | | (Portage version: 2.2.0_alpha110/cvs/Linux x86_64, signed Manifest commit with key 70EB7916) | ||||
* | sci-biology/bioperl-db: Add missing DEP on dev-perl/DBD-mysql, #422999 | Justin Lecher | 2012-06-23 | 2 | -6/+11 |
| | | | | (Portage version: 2.2.0_alpha110/cvs/Linux x86_64) | ||||
* | sci-biology/maq: Add patch for gcc-4.7, #422869 | Justin Lecher | 2012-06-23 | 1 | -6/+8 |
| | | | | (Portage version: 2.2.0_alpha110/cvs/Linux x86_64, signed Manifest commit with key 70EB7916) | ||||
* | sci-biology/maq: Add patch for gcc-4.7, #422869 | Justin Lecher | 2012-06-23 | 3 | -5/+44 |
| | | | | (Portage version: 2.2.0_alpha110/cvs/Linux x86_64) | ||||
* | sci-biology/last: Version BUmp, allows to compile with gcc-4.7, #422573 | Justin Lecher | 2012-06-20 | 1 | -5/+8 |
| | | | | (Portage version: 2.2.0_alpha110/cvs/Linux x86_64, signed Manifest commit with key 70EB7916) | ||||
* | sci-biology/last: Version BUmp, allows to compile with gcc-4.7, #422573 | Justin Lecher | 2012-06-20 | 2 | -1/+46 |
| | | | | (Portage version: 2.2.0_alpha110/cvs/Linux x86_64) | ||||
* | sci-biology/prank: Fix compilation with gcc-4.7, #422581 | Justin Lecher | 2012-06-20 | 1 | -8/+10 |
| | | | | (Portage version: 2.2.0_alpha110/cvs/Linux x86_64, signed Manifest commit with key 70EB7916) | ||||
* | sci-biology/prank: Fix compilation with gcc-4.7, #422581 | Justin Lecher | 2012-06-20 | 4 | -13/+42 |
| | | | | (Portage version: 2.2.0_alpha110/cvs/Linux x86_64) | ||||
* | sci-biology/abyss: Fix compilation with gcc-4.7, #422599; install docs ↵ | Justin Lecher | 2012-06-20 | 1 | -8/+13 |
| | | | | | | inside /usr/share/doc/, #297205 (Portage version: 2.2.0_alpha110/cvs/Linux x86_64, signed Manifest commit with key 70EB7916) | ||||
* | sci-biology/abyss: Fix compilation with gcc-4.7, #422599; install docs ↵ | Justin Lecher | 2012-06-20 | 6 | -5/+83 |
| | | | | | | inside /usr/share/doc/, #297205 (Portage version: 2.2.0_alpha110/cvs/Linux x86_64) | ||||
* | sci-biology/cd-hit: Version Bump, which fixes compilation problems with gcc ↵ | Justin Lecher | 2012-06-20 | 1 | -9/+13 |
| | | | | | | 4.7, #422569; add missing eutils.eclass (Portage version: 2.2.0_alpha110/cvs/Linux x86_64, signed Manifest commit with key 70EB7916) |