diff options
Diffstat (limited to 'sci-chemistry')
-rw-r--r-- | sci-chemistry/openbabel/ChangeLog | 8 | ||||
-rw-r--r-- | sci-chemistry/openbabel/files/openbabel-2.3.2-test_lib_path.patch | 27 | ||||
-rw-r--r-- | sci-chemistry/openbabel/openbabel-2.3.2.ebuild | 80 |
3 files changed, 114 insertions, 1 deletions
diff --git a/sci-chemistry/openbabel/ChangeLog b/sci-chemistry/openbabel/ChangeLog index f4b2faa6ffb3..34238943e1d8 100644 --- a/sci-chemistry/openbabel/ChangeLog +++ b/sci-chemistry/openbabel/ChangeLog @@ -1,6 +1,12 @@ # ChangeLog for sci-chemistry/openbabel # Copyright 1999-2012 Gentoo Foundation; Distributed under the GPL v2 -# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/openbabel/ChangeLog,v 1.59 2012/04/26 15:46:14 jlec Exp $ +# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/openbabel/ChangeLog,v 1.60 2012/12/06 16:14:10 jlec Exp $ + +*openbabel-2.3.2 (06 Dec 2012) + + 06 Dec 2012; Justin Lecher <jlec@gentoo.org> +openbabel-2.3.2.ebuild, + +files/openbabel-2.3.2-test_lib_path.patch: + Version Bump prepared by Reinis Danne, #439434 26 Apr 2012; Justin Lecher <jlec@gentoo.org> openbabel-2.2.3.ebuild: Drop unnessecary die diff --git a/sci-chemistry/openbabel/files/openbabel-2.3.2-test_lib_path.patch b/sci-chemistry/openbabel/files/openbabel-2.3.2-test_lib_path.patch new file mode 100644 index 000000000000..1354f52685c6 --- /dev/null +++ b/sci-chemistry/openbabel/files/openbabel-2.3.2-test_lib_path.patch @@ -0,0 +1,27 @@ +diff -ru old/openbabel-2.3.0/test/CMakeLists.txt new/openbabel-2.3.0/test/CMakeLists.txt +--- old/openbabel-2.3.0/test/CMakeLists.txt 2010-10-26 17:39:01.000000000 +0300 ++++ new/openbabel-2.3.0/test/CMakeLists.txt 2010-11-14 18:13:32.000000000 +0200 +@@ -2,7 +2,7 @@ + add_definitions(-DTESTDATADIR="\\"${CMAKE_SOURCE_DIR}/test/files/\\"") + + # define FORMATDIR for location of format plugin binaries +-add_definitions(-DFORMATDIR="\\"${openbabel_BINARY_DIR}/lib/\\"") ++add_definitions(-DFORMATDIR="\\"${openbabel_BINARY_DIR}/lib${LIB_SUFFIX}/\\"") + + ########################################################### + # new tests using obtest.h +@@ -32,12 +35,12 @@ set(tests + uniqueid + ) + +-if (EIGEN2_FOUND) ++if(EIGEN2_FOUND OR EIGEN3_FOUND) + set(tests + align + ${tests} + ) +-endif (EIGEN2_FOUND) ++endif() + + set(TEST_PATH ${CMAKE_RUNTIME_OUTPUT_DIRECTORY}) + diff --git a/sci-chemistry/openbabel/openbabel-2.3.2.ebuild b/sci-chemistry/openbabel/openbabel-2.3.2.ebuild new file mode 100644 index 000000000000..924e7a54c935 --- /dev/null +++ b/sci-chemistry/openbabel/openbabel-2.3.2.ebuild @@ -0,0 +1,80 @@ +# Copyright 1999-2012 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/openbabel/openbabel-2.3.2.ebuild,v 1.1 2012/12/06 16:14:10 jlec Exp $ + +EAPI=5 + +WX_GTK_VER="2.8" + +inherit cmake-utils eutils wxwidgets + +DESCRIPTION="Interconverts file formats used in molecular modeling" +HOMEPAGE="http://openbabel.sourceforge.net/" +SRC_URI="mirror://sourceforge/openbabel/${P}.tar.gz" + +SLOT="0" +LICENSE="GPL-2" +KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux ~ppc-macos" +IUSE="doc openmp perl python test wxwidgets" + +RDEPEND=" + dev-cpp/eigen:3 + dev-libs/libxml2:2 + !sci-chemistry/babel + sci-libs/inchi + sys-libs/zlib + wxwidgets? ( x11-libs/wxGTK:2.8[X] )" +DEPEND="${RDEPEND} + >=dev-util/cmake-2.4.8 + doc? ( app-doc/doxygen )" +PDEPEND=" + perl? ( sci-chemistry/openbabel-perl ) + python? ( sci-chemistry/openbabel-python )" + +DOCS="AUTHORS ChangeLog NEWS README THANKS doc/*.inc doc/README* doc/*.mol2" + +PATCHES=( "${FILESDIR}"/${P}-test_lib_path.patch ) + +pkg_setup() { + if use openmp; then + if [[ $(tc-getCC) == *gcc ]] && ! tc-has-openmp; then + ewarn "OpenMP is not available in your current selected gcc" + die "need openmp capable gcc" + fi + FORTRAN_NEED_OPENMP=1 + fi +} + +src_configure() { + local mycmakeargs="" + mycmakeargs="${mycmakeargs} + -DOPENBABEL_USE_SYSTEM_INCHI=ON + $(cmake-utils_use_enable openmp OPENMP) + $(cmake-utils_use wxwidgets BUILD_GUI)" + + cmake-utils_src_configure +} + +src_install() { + dohtml doc/{*.html,*.png} + if use doc ; then + insinto /usr/share/doc/${PF}/API/html + doins doc/API/html/* + fi + + cmake-utils_src_install +} + +src_test() { + local mycmakeargs="" + mycmakeargs="${mycmakeargs} + -DOPENBABEL_USE_SYSTEM_INCHI=ON + -DPYTHON_EXECUTABLE=false + $(cmake-utils_use_enable openmp OPENMP) + $(cmake-utils_use wxwidgets BUILD_GUI) + $(cmake-utils_use_enable test TESTS)" + + cmake-utils_src_configure + cmake-utils_src_compile + cmake-utils_src_test -E py +} |