diff options
Diffstat (limited to 'sci-chemistry')
| -rw-r--r-- | sci-chemistry/molrep/ChangeLog | 7 | ||||
| -rw-r--r-- | sci-chemistry/molrep/molrep-11.0.03.ebuild | 59 |
2 files changed, 65 insertions, 1 deletions
diff --git a/sci-chemistry/molrep/ChangeLog b/sci-chemistry/molrep/ChangeLog index 6edd0f6248f4..59cc4096e09b 100644 --- a/sci-chemistry/molrep/ChangeLog +++ b/sci-chemistry/molrep/ChangeLog @@ -1,6 +1,11 @@ # ChangeLog for sci-chemistry/molrep # Copyright 1999-2011 Gentoo Foundation; Distributed under the GPL v2 -# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/molrep/ChangeLog,v 1.18 2011/07/02 08:55:01 jlec Exp $ +# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/molrep/ChangeLog,v 1.19 2011/09/07 16:40:39 jlec Exp $ + +*molrep-11.0.03 (07 Sep 2011) + + 07 Sep 2011; Justin Lecher <jlec@gentoo.org> +molrep-11.0.03.ebuild: + Version Bump 02 Jul 2011; Justin Lecher <jlec@gentoo.org> molrep-11.0.02.ebuild, metadata.xml: diff --git a/sci-chemistry/molrep/molrep-11.0.03.ebuild b/sci-chemistry/molrep/molrep-11.0.03.ebuild new file mode 100644 index 000000000000..d01988129d41 --- /dev/null +++ b/sci-chemistry/molrep/molrep-11.0.03.ebuild @@ -0,0 +1,59 @@ +# Copyright 1999-2011 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/molrep/molrep-11.0.03.ebuild,v 1.1 2011/09/07 16:40:38 jlec Exp $ + +EAPI=4 + +inherit eutils flag-o-matic fortran-2 multilib toolchain-funcs + +DESCRIPTION="molecular replacement program" +HOMEPAGE="http://www.ysbl.york.ac.uk/~alexei/molrep.html" +SRC_URI="http://dev.gentoo.org/~jlec/distfiles/${P}.tar.gz" + +LICENSE="ccp4" +SLOT="0" +KEYWORDS="~amd64 ~ppc ~x86 ~amd64-linux ~x86-linux" +IUSE="" + +RDEPEND=" + virtual/fortran + + >=sci-libs/ccp4-libs-6.1.3 + sci-libs/mmdb + virtual/lapack" +DEPEND="${RDEPEND}" + +S="${WORKDIR}/${PN}" + +src_prepare() { + epatch \ + "${FILESDIR}"/11.0.00-respect-FLAGS.patch \ + "${FILESDIR}"/11.0.00-test.patch + [[ $(tc-getFC) =~ gfortran ]] && append-fflags -fno-second-underscore +} + +src_compile() { + cd "${S}"/src + emake clean + emake \ + MR_FORT="$(tc-getFC) ${FFLAGS}" \ + FFLAGS="${FFLAGS}" \ + LDFLAGS="${LDFLAGS}" \ + MR_LIBRARY="-L${EPREFIX}/usr/$(get_libdir) -lccp4f -lccp4c $(pkg-config --libs mmdb lapack) -lccif -lstdc++ -lm" +} + +src_test() { + export MR_TEST="${S}/bin/" + cd "${S}"/molrep_check/work + mkdir out scr + cp ../*.bat . + bash em.bat || die + bash mr.bat || die +} + +src_install() { + exeinto /usr/libexec/ccp4/bin/ + doexe bin/${PN} + dosym ../libexec/ccp4/bin/${PN} /usr/bin/${PN} + dodoc readme doc/${PN}.rtf +} |