diff options
| -rw-r--r-- | sci-biology/t-coffee/ChangeLog | 14 | ||||
| -rw-r--r-- | sci-biology/t-coffee/Manifest | 4 | ||||
| -rw-r--r-- | sci-biology/t-coffee/files/digest-t-coffee-2.03 | 1 | ||||
| -rw-r--r-- | sci-biology/t-coffee/files/digest-t-coffee-2.50 | 1 | ||||
| -rw-r--r-- | sci-biology/t-coffee/t-coffee-2.26.ebuild | 4 | ||||
| -rw-r--r-- | sci-biology/t-coffee/t-coffee-2.50.ebuild (renamed from sci-biology/t-coffee/t-coffee-2.03.ebuild) | 18 |
6 files changed, 24 insertions, 18 deletions
diff --git a/sci-biology/t-coffee/ChangeLog b/sci-biology/t-coffee/ChangeLog index ffdad293981d..87a019227c4f 100644 --- a/sci-biology/t-coffee/ChangeLog +++ b/sci-biology/t-coffee/ChangeLog @@ -1,6 +1,18 @@ # ChangeLog for sci-biology/t-coffee # Copyright 1999-2005 Gentoo Foundation; Distributed under the GPL v2 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/t-coffee/ChangeLog,v 1.2 2005/03/30 21:11:46 ribosome Exp $ +# $Header: /var/cvsroot/gentoo-x86/sci-biology/t-coffee/ChangeLog,v 1.3 2005/05/12 00:22:36 ribosome Exp $ + +*t-coffee-2.50 (12 May 2005) + + 12 May 2005; Olivier Fisette <ribosome@gentoo.org> -t-coffee-2.03.ebuild, + t-coffee-2.26.ebuild, +t-coffee-2.50.ebuild: + Removed obsolete version. + +*t-coffee-2.50 (12 May 2005) + + 12 May 2005; Olivier Fisette <ribosome@gentoo.org> t-coffee-2.26.ebuild, + +t-coffee-2.50.ebuild: + New version: 2.50. Added 2.26 to x86. *t-coffee-2.26 (30 Mar 2005) diff --git a/sci-biology/t-coffee/Manifest b/sci-biology/t-coffee/Manifest index aaf320336a77..4e2f9be4edf7 100644 --- a/sci-biology/t-coffee/Manifest +++ b/sci-biology/t-coffee/Manifest @@ -1,6 +1,8 @@ -MD5 c3d7c94c9fdb0576cb3206675970fab6 t-coffee-2.26.ebuild 1352 +MD5 0d66245d34233b41be174928098e310a t-coffee-2.26.ebuild 1351 MD5 ba7eb142bfd24a0004f65c04bae8025e t-coffee-2.03.ebuild 1516 +MD5 5970ef128821bcdafee85674699e7d0d t-coffee-2.50.ebuild 1290 MD5 51df6a84755ba0b96a800abe6b8a40d9 ChangeLog 479 MD5 0bbfd32ca9864625c55ab6460dbbd963 metadata.xml 755 MD5 733ccc786341ddaabbed48391bcdb961 files/digest-t-coffee-2.03 86 MD5 746d3921012d17495ab81da3878a076d files/digest-t-coffee-2.26 86 +MD5 fa17e53f0288a9e7046c7a15bfe12cb7 files/digest-t-coffee-2.50 87 diff --git a/sci-biology/t-coffee/files/digest-t-coffee-2.03 b/sci-biology/t-coffee/files/digest-t-coffee-2.03 deleted file mode 100644 index 66af76629bc9..000000000000 --- a/sci-biology/t-coffee/files/digest-t-coffee-2.03 +++ /dev/null @@ -1 +0,0 @@ -MD5 a86e2d83c17058b03be0170566d634f0 T-COFFEE_distribution_Version_2.03.tar.gz 864853 diff --git a/sci-biology/t-coffee/files/digest-t-coffee-2.50 b/sci-biology/t-coffee/files/digest-t-coffee-2.50 new file mode 100644 index 000000000000..c624432fc6f3 --- /dev/null +++ b/sci-biology/t-coffee/files/digest-t-coffee-2.50 @@ -0,0 +1 @@ +MD5 9fe4f7e1d12bc17bc200e04f89898488 T-COFFEE_distribution_Version_2.50.tar.gz 1474719 diff --git a/sci-biology/t-coffee/t-coffee-2.26.ebuild b/sci-biology/t-coffee/t-coffee-2.26.ebuild index 27d2c81e8a00..1f62689e5811 100644 --- a/sci-biology/t-coffee/t-coffee-2.26.ebuild +++ b/sci-biology/t-coffee/t-coffee-2.26.ebuild @@ -1,6 +1,6 @@ # Copyright 1999-2005 Gentoo Foundation # Distributed under the terms of the GNU General Public License v2 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/t-coffee/t-coffee-2.26.ebuild,v 1.1 2005/03/30 21:11:46 ribosome Exp $ +# $Header: /var/cvsroot/gentoo-x86/sci-biology/t-coffee/t-coffee-2.26.ebuild,v 1.2 2005/05/12 00:22:36 ribosome Exp $ inherit toolchain-funcs @@ -13,7 +13,7 @@ RESTRICT="nomirror" SLOT="0" IUSE="" -KEYWORDS="~x86" +KEYWORDS="x86" DEPEND="sci-biology/clustalw" diff --git a/sci-biology/t-coffee/t-coffee-2.03.ebuild b/sci-biology/t-coffee/t-coffee-2.50.ebuild index 250facab04ef..a222cbd86d37 100644 --- a/sci-biology/t-coffee/t-coffee-2.03.ebuild +++ b/sci-biology/t-coffee/t-coffee-2.50.ebuild @@ -1,6 +1,6 @@ # Copyright 1999-2005 Gentoo Foundation # Distributed under the terms of the GNU General Public License v2 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/t-coffee/t-coffee-2.03.ebuild,v 1.1 2005/03/03 18:41:31 ribosome Exp $ +# $Header: /var/cvsroot/gentoo-x86/sci-biology/t-coffee/t-coffee-2.50.ebuild,v 1.1 2005/05/12 00:22:36 ribosome Exp $ inherit toolchain-funcs @@ -35,25 +35,17 @@ src_compile() { src_install() { cd ${TCDIR}/bin - dobin t_coffee \ - blast_aln2fasta_aln.pl \ - extract_from_pdb \ - fasta_aln2fasta_aln_unique_name.pl \ - fugue_client \ - msf_aln2fasta_aln.pl \ - t_coffee_dpa \ - t_coffee_dpa2 + dobin t_coffee insinto /usr/share/${PN}/lib doins ${TCDIR}/html dodoc ${TCDIR}/doc/README4T-COFFEE insinto /usr/share/doc/${PF} doins ${TCDIR}/doc/t_coffee{_doc.{doc,pdf},.pdf} + doins ${TCDIR}/doc/*.txt - insinto /usr/share/${PN}/example/seq - doins ${TCDIR}/example/seq/* - insinto /usr/share/${PN}/example/test - doins ${TCDIR}/example/test/*.{aln,pep} + insinto /usr/share/${PN}/example + doins ${TCDIR}/example/* } src_test() { |