Removed obsolete version. New version: 2.50. Added 2.26 to x86.

(Portage version: 2.0.51.19)

6 files changed, 24 insertions, 18 deletions

diff --git a/sci-biology/t-coffee/ChangeLog b/sci-biology/t-coffee/ChangeLog
index ffdad293981d..87a019227c4f 100644
--- a/sci-biology/t-coffee/ChangeLog
+++ b/sci-biology/t-coffee/ChangeLog
@@ -1,6 +1,18 @@
 # ChangeLog for sci-biology/t-coffee
 # Copyright 1999-2005 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/t-coffee/ChangeLog,v 1.2 2005/03/30 21:11:46 ribosome Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/t-coffee/ChangeLog,v 1.3 2005/05/12 00:22:36 ribosome Exp $
+
+*t-coffee-2.50 (12 May 2005)
+
+  12 May 2005; Olivier Fisette <ribosome@gentoo.org> -t-coffee-2.03.ebuild,
+  t-coffee-2.26.ebuild, +t-coffee-2.50.ebuild:
+  Removed obsolete version.
+
+*t-coffee-2.50 (12 May 2005)
+
+  12 May 2005; Olivier Fisette <ribosome@gentoo.org> t-coffee-2.26.ebuild,
+  +t-coffee-2.50.ebuild:
+  New version: 2.50. Added 2.26 to x86.
 
 *t-coffee-2.26 (30 Mar 2005)
 
diff --git a/sci-biology/t-coffee/Manifest b/sci-biology/t-coffee/Manifest
index aaf320336a77..4e2f9be4edf7 100644
--- a/sci-biology/t-coffee/Manifest
+++ b/sci-biology/t-coffee/Manifest
@@ -1,6 +1,8 @@
-MD5 c3d7c94c9fdb0576cb3206675970fab6 t-coffee-2.26.ebuild 1352
+MD5 0d66245d34233b41be174928098e310a t-coffee-2.26.ebuild 1351
 MD5 ba7eb142bfd24a0004f65c04bae8025e t-coffee-2.03.ebuild 1516
+MD5 5970ef128821bcdafee85674699e7d0d t-coffee-2.50.ebuild 1290
 MD5 51df6a84755ba0b96a800abe6b8a40d9 ChangeLog 479
 MD5 0bbfd32ca9864625c55ab6460dbbd963 metadata.xml 755
 MD5 733ccc786341ddaabbed48391bcdb961 files/digest-t-coffee-2.03 86
 MD5 746d3921012d17495ab81da3878a076d files/digest-t-coffee-2.26 86
+MD5 fa17e53f0288a9e7046c7a15bfe12cb7 files/digest-t-coffee-2.50 87
diff --git a/sci-biology/t-coffee/files/digest-t-coffee-2.03 b/sci-biology/t-coffee/files/digest-t-coffee-2.03
deleted file mode 100644
index 66af76629bc9..000000000000
--- a/sci-biology/t-coffee/files/digest-t-coffee-2.03
+++ /dev/null
@@ -1 +0,0 @@
-MD5 a86e2d83c17058b03be0170566d634f0 T-COFFEE_distribution_Version_2.03.tar.gz 864853
diff --git a/sci-biology/t-coffee/files/digest-t-coffee-2.50 b/sci-biology/t-coffee/files/digest-t-coffee-2.50
new file mode 100644
index 000000000000..c624432fc6f3
--- /dev/null
+++ b/sci-biology/t-coffee/files/digest-t-coffee-2.50
@@ -0,0 +1 @@
+MD5 9fe4f7e1d12bc17bc200e04f89898488 T-COFFEE_distribution_Version_2.50.tar.gz 1474719
diff --git a/sci-biology/t-coffee/t-coffee-2.26.ebuild b/sci-biology/t-coffee/t-coffee-2.26.ebuild
index 27d2c81e8a00..1f62689e5811 100644
--- a/sci-biology/t-coffee/t-coffee-2.26.ebuild
+++ b/sci-biology/t-coffee/t-coffee-2.26.ebuild
@@ -1,6 +1,6 @@
 # Copyright 1999-2005 Gentoo Foundation
 # Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/t-coffee/t-coffee-2.26.ebuild,v 1.1 2005/03/30 21:11:46 ribosome Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/t-coffee/t-coffee-2.26.ebuild,v 1.2 2005/05/12 00:22:36 ribosome Exp $
 
 inherit toolchain-funcs
 
@@ -13,7 +13,7 @@ RESTRICT="nomirror"
 
 SLOT="0"
 IUSE=""
-KEYWORDS="~x86"
+KEYWORDS="x86"
 
 DEPEND="sci-biology/clustalw"
 
diff --git a/sci-biology/t-coffee/t-coffee-2.03.ebuild b/sci-biology/t-coffee/t-coffee-2.50.ebuild
index 250facab04ef..a222cbd86d37 100644
--- a/sci-biology/t-coffee/t-coffee-2.03.ebuild
+++ b/sci-biology/t-coffee/t-coffee-2.50.ebuild
@@ -1,6 +1,6 @@
 # Copyright 1999-2005 Gentoo Foundation
 # Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/t-coffee/t-coffee-2.03.ebuild,v 1.1 2005/03/03 18:41:31 ribosome Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/t-coffee/t-coffee-2.50.ebuild,v 1.1 2005/05/12 00:22:36 ribosome Exp $
 
 inherit toolchain-funcs
 
@@ -35,25 +35,17 @@ src_compile() {
 
 src_install() {
 	cd ${TCDIR}/bin
-	dobin t_coffee \
-		blast_aln2fasta_aln.pl \
-		extract_from_pdb \
-		fasta_aln2fasta_aln_unique_name.pl \
-		fugue_client \
-		msf_aln2fasta_aln.pl \
-		t_coffee_dpa \
-		t_coffee_dpa2
+	dobin t_coffee
 	insinto /usr/share/${PN}/lib
 	doins ${TCDIR}/html
 
 	dodoc ${TCDIR}/doc/README4T-COFFEE
 	insinto /usr/share/doc/${PF}
 	doins ${TCDIR}/doc/t_coffee{_doc.{doc,pdf},.pdf}
+	doins ${TCDIR}/doc/*.txt
 
-	insinto /usr/share/${PN}/example/seq
-	doins ${TCDIR}/example/seq/*
-	insinto /usr/share/${PN}/example/test
-	doins ${TCDIR}/example/test/*.{aln,pep}
+	insinto /usr/share/${PN}/example
+	doins ${TCDIR}/example/*
 }
 
 src_test() {