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authorAndrey Kislyuk <weaver@gentoo.org>2009-04-20 17:40:44 +0000
committerAndrey Kislyuk <weaver@gentoo.org>2009-04-20 17:40:44 +0000
commit9d56ae0caa7a7ceef65a940549b8aaab3361eea4 (patch)
treed03fe7e78769c8c74d7ac1b5758a05aedcd20b05 /sci-biology
parentNote in comment, that the LDFLAGS patch has been accepted upstream (diff)
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Version bump
(Portage version: 2.2_rc30/cvs/Linux x86_64)
Diffstat (limited to 'sci-biology')
-rw-r--r--sci-biology/bwa/ChangeLog8
-rw-r--r--sci-biology/bwa/bwa-0.4.6.ebuild (renamed from sci-biology/bwa/bwa-0.4.5.ebuild)9
2 files changed, 13 insertions, 4 deletions
diff --git a/sci-biology/bwa/ChangeLog b/sci-biology/bwa/ChangeLog
index c9672024fce0..93387241c233 100644
--- a/sci-biology/bwa/ChangeLog
+++ b/sci-biology/bwa/ChangeLog
@@ -1,6 +1,12 @@
# ChangeLog for sci-biology/bwa
# Copyright 1999-2009 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/bwa/ChangeLog,v 1.1 2009/02/26 22:11:27 weaver Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/bwa/ChangeLog,v 1.2 2009/04/20 17:40:44 weaver Exp $
+
+*bwa-0.4.6 (20 Apr 2009)
+
+ 20 Apr 2009; Andrey Kislyuk <weaver@gentoo.org> -bwa-0.4.5.ebuild,
+ +bwa-0.4.6.ebuild:
+ Version bump
*bwa-0.4.5 (26 Feb 2009)
diff --git a/sci-biology/bwa/bwa-0.4.5.ebuild b/sci-biology/bwa/bwa-0.4.6.ebuild
index f9ba31046a8e..22872001f42f 100644
--- a/sci-biology/bwa/bwa-0.4.5.ebuild
+++ b/sci-biology/bwa/bwa-0.4.6.ebuild
@@ -1,6 +1,8 @@
# Copyright 1999-2009 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/bwa/bwa-0.4.5.ebuild,v 1.1 2009/02/26 22:11:27 weaver Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/bwa/bwa-0.4.6.ebuild,v 1.1 2009/04/20 17:40:44 weaver Exp $
+
+EAPI=2
DESCRIPTION="Burrows-Wheeler Alignment Tool, a fast short genomic sequence aligner"
HOMEPAGE="http://maq.sourceforge.net/"
@@ -14,13 +16,14 @@ KEYWORDS="~amd64 ~x86"
DEPEND=""
RDEPEND=""
-src_unpack() {
- unpack ${A}
+src_prepare() {
sed -i 's/^CFLAGS=/CFLAGS+=/' "${S}/Makefile"
}
src_install() {
dobin bwa || die
doman bwa.1 || die
+ exeinto /usr/share/${PN}
+ doexe solid2fastq.pl || die
dodoc ChangeLog NEWS
}