diff options
author | 2012-02-27 15:33:02 -0500 | |
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committer | 2012-02-27 15:33:02 -0500 | |
commit | a1ed8d163827022b477da739ee692d8682c3f784 (patch) | |
tree | 5dd23543c1945f5c901abf6401362bd517a5db15 /sci-chemistry | |
parent | merge latest 0.6.6.10 updates from bug #300917 (diff) | |
download | jtriley-a1ed8d163827022b477da739ee692d8682c3f784.tar.gz jtriley-a1ed8d163827022b477da739ee692d8682c3f784.tar.bz2 jtriley-a1ed8d163827022b477da739ee692d8682c3f784.zip |
fix sci-chemistry/vmd-1.9.1 when gcc != 4.4
Diffstat (limited to 'sci-chemistry')
-rw-r--r-- | sci-chemistry/vmd/ChangeLog | 223 | ||||
-rw-r--r-- | sci-chemistry/vmd/Manifest | 6 | ||||
-rw-r--r-- | sci-chemistry/vmd/metadata.xml | 15 | ||||
-rw-r--r-- | sci-chemistry/vmd/vmd-1.9.1.ebuild | 210 |
4 files changed, 454 insertions, 0 deletions
diff --git a/sci-chemistry/vmd/ChangeLog b/sci-chemistry/vmd/ChangeLog new file mode 100644 index 0000000..c913d8b --- /dev/null +++ b/sci-chemistry/vmd/ChangeLog @@ -0,0 +1,223 @@ +# ChangeLog for sci-chemistry/vmd +# Copyright 1999-2012 Gentoo Foundation; Distributed under the GPL v2 +# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/vmd/ChangeLog,v 1.46 2012/02/14 15:26:56 alexxy Exp $ + + 14 Feb 2012; Alexey Shvetsov <alexxy@gentoo.org> vmd-1.9.1.ebuild: + Fix plugin install + +*vmd-1.9.1 (14 Feb 2012) + + 14 Feb 2012; Alexey Shvetsov <alexxy@gentoo.org> +vmd-1.9.1.ebuild: + Version bump =D + + 10 Jan 2012; Justin Lecher <jlec@gentoo.org> vmd-1.9.ebuild: + Remove USE=static-libs beacuse this breaks build, #365051 + + 10 Jan 2012; Justin Lecher <jlec@gentoo.org> vmd-1.9.ebuild, metadata.xml: + Enhance nofetch msg, fix compilation with USE=cuda and gcc != 4.4*, thanks + xarthisius for the help + + 20 Jul 2011; Pacho Ramos <pacho@gentoo.org> metadata.xml: + Drop maintainer due retirement, bug #105599 + + 15 Jun 2011; Justin Lecher <jlec@gentoo.org> vmd-1.8.7-r2.ebuild, + vmd-1.9.ebuild: + FILESDIR is gone, wverything is mirrored now. + + 13 Jun 2011; Justin Lecher <jlec@gentoo.org> vmd-1.8.7-r2.ebuild, + vmd-1.9.ebuild: + Mirrored files aren't fetchrestricted + + 13 Jun 2011; Justin Lecher <jlec@gentoo.org> vmd-1.8.7-r2.ebuild, + -files/vmd-1.8.7-gentoo.patch, -files/vmd-1.8.7-respect-flags.patch, + vmd-1.9.ebuild, -files/vmd-1.9-gentoo-base.patch, + -files/vmd-1.9-gentoo-plugins.patch, -files/vmd.desktop, -files/vmd.png: + No binaryfiles in VCS please, #370915 + + 27 Mar 2011; Justin Lecher <jlec@gentoo.org> vmd-1.9.ebuild: + Correct version of cuda dep, #360401 + +*vmd-1.9 (22 Mar 2011) + + 22 Mar 2011; Justin Lecher <jlec@gentoo.org> vmd-1.8.7-r2.ebuild, + +vmd-1.9.ebuild, +files/vmd-1.9-gentoo-base.patch, + +files/vmd-1.9-gentoo-plugins.patch, metadata.xml: + Version Bump, #358981; Dropped ppc due to missing KEYWORDS in DEPs + + 22 Mar 2011; Justin Lecher <jlec@gentoo.org> vmd-1.8.7-r2.ebuild: + Restrict fltk version being able to return includedir + + 20 Mar 2011; Justin Lecher <jlec@gentoo.org> -vmd-1.8.7-r1.ebuild, + vmd-1.8.7-r2.ebuild: + x11-libs/fltk SLOTMOVE 1.1 -> 1, corrected ebuild accordingly + + 11 Dec 2010; Justin Lecher <jlec@gentoo.org> vmd-1.8.7-r2.ebuild: + QA on quoting + + 30 Oct 2010; Justin Lecher <jlec@gentoo.org> vmd-1.8.7-r2.ebuild: + Corrected msms DEP to sci-chemistry/msms-bin + + 21 Aug 2010; Alexey Shvetsov <alexxy@gentoo.org> vmd-1.8.7-r2.ebuild, + metadata.xml: + Add msms and povray to RDEPS as per bug #293504 + +*vmd-1.8.7-r2 (27 Jul 2010) + + 27 Jul 2010; Justin Lecher <jlec@gentoo.org> + -files/vmd-1.8.5-config-gentoo.patch, + -files/vmd-1.8.6-config-gentoo.patch, + -files/vmd-1.8.6-fix-crash-on-tcl8.5.patch, + -files/vmd-1.8.6-python-2.5.patch, -files/vmd-1.8.6-tcltk8.5.patch, + vmd-1.8.7-r1.ebuild, +vmd-1.8.7-r2.ebuild, -files/vmd-1.8.7-config.patch, + files/vmd-1.8.7-gentoo.patch, +files/vmd-1.8.7-respect-flags.patch, + -files/vmd-1.8.7-use-bash-startup.patch: + Make it really prefix ready, don't mix CFLAGS/CXXFLAGS,clean old patches + + 24 Jul 2010; Justin Lecher <jlec@gentoo.org> vmd-1.8.7-r1.ebuild: + Added prefix changes, thanks rei4dan #327517; keyworded for ~-linux prefix + + 28 May 2010; Justin Lecher <jlec@gentoo.org> -vmd-1.8.6.ebuild, + -vmd-1.8.6-r1.ebuild, -vmd-1.8.7.ebuild: + Removed all non PythonABI compatible ebuilds + +*vmd-1.8.7-r1 (18 May 2010) + + 18 May 2010; Justin Lecher <jlec@gentoo.org> +vmd-1.8.7-r1.ebuild, + files/vmd-1.8.7-config.patch, +files/vmd-1.8.7-gentoo.patch: + Fix for new python ABIs, #316187; building netcdf plugin, #306893, thanks + Kamil Kisiel for the patch; LDFLAGS are respected now; EAPI=3 and basic + fixes for prefix, usability has to be tested + + 23 Feb 2010; Alexey Shvetsov <alexxy@gentoo.org> vmd-1.8.6-r1.ebuild, + vmd-1.8.7.ebuild, metadata.xml: + add tachyon raytracer as rdep + + 18 Sep 2009; Petteri Räty <betelgeuse@gentoo.org> vmd-1.8.7.ebuild: + Remove built_with_use and use proper DEPEND atoms that work properly for + both tk 8.4 and 8.5 users. + + 11 Aug 2009; Markus Dittrich <markusle@gentoo.org> vmd-1.8.7.ebuild, + +files/vmd.desktop, +files/vmd.png: + Added desktop entry and vmd icon (#262275). + Thanks much to Bjoern Olausson for creating them. + + 07 Aug 2009; Markus Dittrich <markusle@gentoo.org> vmd-1.8.7.ebuild, + files/vmd-1.8.7-config.patch: + Remove the EAPI2 check for -truetype and add explicit error logic + so tk-8.4 users can emerge vmd as well. Also updated the config + patch to handle tk8.4 better. + +*vmd-1.8.7 (05 Aug 2009) + + 05 Aug 2009; Markus Dittrich <markusle@gentoo.org> +vmd-1.8.7.ebuild, + +files/vmd-1.8.7-config.patch, +files/vmd-1.8.7-use-bash-startup.patch: + Version bump (fixes bug #262275). + + 07 Jul 2009; Diego E. Pettenò <flameeyes@gentoo.org> vmd-1.8.6-r1.ebuild: + Use elog for fetch error. + + 18 May 2009; Jeff Gardner <je_fro@gentoo.org> + +files/vmd-1.8.6-fix-crash-on-tcl8.5.patch: + adding alexxy's patch :) + + 17 May 2009; Jeff Gardner <je_fro@gentoo.org> +vmd-1.8.6-r1.ebuild: + Fixed by alexxy to work with tcl8.5 + +*vmd-1.8.6-r1 (17 May 2009) + + 17 May 2009; Jeff Gardner <je_fro@gentoo.org> +vmd-1.8.6-r1.ebuild: + Fixed by alexxy to work with tcl5.8 + + 12 Nov 2008; Markus Dittrich <markusle@gentoo.org> -vmd-1.8.5.ebuild, + vmd-1.8.6.ebuild: + Restrict fltk to 1.1 slot since vmd is not fltk-2 ready + (see bug #246445). Removed old ebuild. + + 13 Mar 2008; Markus Dittrich <markusle@gentoo.org> + +files/vmd-1.8.6-tcltk8.5.patch, vmd-1.8.6.ebuild: + Added tcltk-8.5 support (fixes bug #212936). + + 20 Sep 2007; Markus Dittrich <markusle@gentoo.org> + +files/vmd-1.8.6-python-2.5.patch, vmd-1.8.6.ebuild: + Added patch to fix python-2.5 compile issues on amd64 (fixes bug + #192902). Thanks much to milan hodoscek <milan@cmm.ki.si> for his + patch. + + 22 Jul 2007; Donnie Berkholz <dberkholz@gentoo.org>; vmd-1.8.5.ebuild, + vmd-1.8.6.ebuild: + Drop virtual/x11 references. + +*vmd-1.8.6 (15 Apr 2007) + + 15 Apr 2007; Markus Dittrich <markusle@gentoo.org> + -files/vmd-1.8.4-config-gentoo.patch, -files/vmd-1.8.4-paratool.patch, + -files/vmd-1.8.4-plugin-autopsf.patch, + +files/vmd-1.8.6-config-gentoo.patch, +vmd-1.8.6.ebuild: + Version bump (fixes bug #174595). Thanks much to Jeffrey Gardner + <je_fro@gentoo.org> for his patch and ebuild. + + 08 Jan 2007; Danny van Dyk <kugelfang@gentoo.org> -vmd-1.8.4.ebuild, + -vmd-1.8.4-r1.ebuild: + QA: Removed unused versions. + + 07 Jan 2007; Markus Dittrich <markusle@gentoo.org> vmd-1.8.5.ebuild: + Replaced backslashes with colons in some sed statements + (see bug #145467). + + 03 Jan 2007; Jeff Gardner <je_fro@gentoo.org> vmd-1.8.5.ebuild: + added ~amd64 + + 27 Dec 2006; Markus Dittrich <markusle@gentoo.org> vmd-1.8.5.ebuild: + Remove netcdf use flag and enable netcdf support by default + since it is needed by the catdcd plugin. This fixes bug #159081. + + 22 Dec 2006; Markus Dittrich <markusle@gentoo.org> + files/vmd-1.8.5-config-gentoo.patch, vmd-1.8.5.ebuild: + Added netcdf support. This fixes bug #158771. + + 09 Nov 2006; Markus Dittrich <markusle@gentoo.org> vmd-1.8.5.ebuild: + Enabled IMD functionality. Thanks to Stephane Gagne + <sgagne@rsvs.ulaval.ca> for pointing this out (see bug #154429). + + 20 Sep 2006; Donnie Berkholz <dberkholz@gentoo.org>; metadata.xml: + (#148281) Change herd to sci-chemistry from sci. + +*vmd-1.8.5 (26 Aug 2006) + + 26 Aug 2006; Markus Dittrich <markusle@gentoo.org> + -files/vmd-1.8.3-config-gentoo.patch, + +files/vmd-1.8.5-config-gentoo.patch, -vmd-1.8.3.ebuild, + +vmd-1.8.5.ebuild: + Version bump. Also removed some of the old ebuilds. + +*vmd-1.8.4-r1 (13 Aug 2006) + + 13 Aug 2006; Markus Dittrich <markusle@gentoo.org> + +files/vmd-1.8.4-paratool.patch, +vmd-1.8.4-r1.ebuild: + VMD now depends on stride in order to properly display secondary + structure information. Also patched a paratool plugin error under + tcl-8.4.13. + + 29 Apr 2006; Marien Zwart <marienz@gentoo.org> Manifest: + Fix SHA256 digests. + +*vmd-1.8.4 (18 Apr 2006) + + 18 Apr 2006; Markus Dittrich <markusle@gentoo.org> + +files/vmd-1.8.4-config-gentoo.patch, + +files/vmd-1.8.4-plugin-autopsf.patch, +vmd-1.8.4.ebuild: + Version bump. + + 21 Mar 2006; Donnie Berkholz <spyderous@gentoo.org>; vmd-1.8.3.ebuild: + Keyword ~ppc, and make changes to the wrapper script that may also fix amd64 + and alpha. + + 14 Feb 2006; Markus Dittrich <markusle@gentoo.org> Manifest: + Fixed bogus .Chanlog.swp file entry in Manifest. + +*vmd-1.8.3 (10 Feb 2006) + + 10 Feb 2006; Markus Dittrich <markusle@gentoo.org> + +files/vmd-1.8.3-config-gentoo.patch, +metadata.xml, +vmd-1.8.3.ebuild: + Initial import. + diff --git a/sci-chemistry/vmd/Manifest b/sci-chemistry/vmd/Manifest new file mode 100644 index 0000000..42f8c6e --- /dev/null +++ b/sci-chemistry/vmd/Manifest @@ -0,0 +1,6 @@ +DIST vmd-1.8.7-gentoo-patches.tar.xz 15900 RMD160 1eed2bc6eebacf846a15973e3ec3378de2890551 SHA1 5d157f9288b9552f3bc69af7283f9f83d71b69be SHA256 0a991ccfda6ffc68de930919bd76b9dba208d4ca5c21ce19d283da1c1727fcda +DIST vmd-1.8.7.src.tar.gz 23853864 RMD160 1c4751552d7b3f376f91a4b28ee9d4a028ded01a SHA1 409b6f8959d551f581991073f98885b47c21c25c SHA256 72fe2fb7eff4c805a886ea929c7e143a3a1be57cc817b5d1719d29e591d80316 +DIST vmd-1.9-gentoo-patches.tar.xz 14508 SHA256 c18b16704c6c186e8ac753c96f38f85413258bce786635b2635a9aa18de5c28c SHA512 7540a5ce570ebd1ba7b913fd9ba531af9fa7b3870d06e64c0ae73e4eb10ce9bc21169ba52f95b1aa635045cdb6fd13f6db51eec38ce5493805c8eda99ce20066 WHIRLPOOL 7843440b89ce974466518c0294d3664c318dcc66b62c6a9029c88395596ffcd7f579dd429d8368164b81eda70700e451e0643920538ed86c1ce3ec6b9f91f690 +DIST vmd-1.9.1-gentoo-patches.tar.xz 79240 SHA256 60fe1b017b1aed5cdd4a417d4a2dbd20f75eae24c83d1da68c504a31bfbdbcd8 SHA512 37856d5e00d3d4452324865190aef4ac05a7a49cbddffe83f568d3190b521f17e6e1e5323dee3127aadfb446ec0871bfd06dff47d640ed862547710ec4b0a421 WHIRLPOOL b3eebffe24a96ad1c7ce9ebc565e1b88d6f52894569a6d72c22e87fb3d6975d14779bd8c4305e3e9f2ecf9d981503b8bcea78a476a1a66eb37b78c759b3bdf60 +DIST vmd-1.9.1.src.tar.gz 30748110 SHA256 54aa88e03d86d763383e7b98592a152c9d68e78383e13af0dd2aca09b002491f SHA512 a54cb08e8a9ce801c2ca986f746bff0a041a25d5cffebc8d4af50813b6c05d04a3209a27830d580287230edaf3048a78923ae54bf367ab69c3d81388ab1787bd WHIRLPOOL 26d2a855c0768583cd45aed105fdd8f1ef59d59b8ce11c1903f5fc2008ea05989b8a32a0d817725e711613f8abfc22bb5301f20ea8d597efe9c7913790b25bb7 +DIST vmd-1.9.src.tar.gz 28639907 SHA256 4209b06faba3af324575570bd0533258471f6c782262c0727b52cdce9de89579 SHA512 d307617b6892483ba7147aeaeb4c88dfd374e00ad68ec8dd3edbc5015e26df9623b49b333e7abe06b9a41436f95093c71006f827fb3607f68b395eb669dc11bc WHIRLPOOL 17f0282043da6da5f2dd934387369465095ec1a0e0298b242044405f1f02afe056b707d5638dc5a81351a9765c23fcada23e78bb6536e11e9f52f896bde961f5 diff --git a/sci-chemistry/vmd/metadata.xml b/sci-chemistry/vmd/metadata.xml new file mode 100644 index 0000000..be76141 --- /dev/null +++ b/sci-chemistry/vmd/metadata.xml @@ -0,0 +1,15 @@ +<?xml version="1.0" encoding="UTF-8"?> +<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> +<pkgmetadata> + <maintainer> + <email>alexxy@gentoo.org</email> + <name>Alexey Shvetsov</name> + </maintainer> + <herd>sci-chemistry</herd> + <use> + <flag name="msms">Add support for MSMS SAS calcualtion tool</flag> + <flag name="povray">Add support for povray raytracer for HQ images</flag> + <flag name="tachyon">Add support for tachyon raytracer for HQ images</flag> + <flag name="cuda">Use nvidia cuda toolkit for speeding up computations</flag> + </use> +</pkgmetadata> diff --git a/sci-chemistry/vmd/vmd-1.9.1.ebuild b/sci-chemistry/vmd/vmd-1.9.1.ebuild new file mode 100644 index 0000000..91cb9d7 --- /dev/null +++ b/sci-chemistry/vmd/vmd-1.9.1.ebuild @@ -0,0 +1,210 @@ +# Copyright 1999-2012 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/vmd/vmd-1.9.1.ebuild,v 1.2 2012/02/14 15:26:56 alexxy Exp $ + +EAPI="3" + +PYTHON_DEPEND="2" + +inherit eutils multilib python toolchain-funcs + +DESCRIPTION="Visual Molecular Dynamics" +HOMEPAGE="http://www.ks.uiuc.edu/Research/vmd/" +SRC_URI=" + mirror://gentoo/${P}-gentoo-patches.tar.xz + ${P}.src.tar.gz" + +SLOT="0" +LICENSE="vmd" +KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux" +IUSE="cuda msms povray tachyon xinerama" + +RESTRICT="fetch" + +# currently, tk-8.5* with USE=truetype breaks some +# tk apps such as Sequence Viewer or Timeline. +CDEPEND=" + || ( + >=dev-lang/tk-8.5[-truetype] + =dev-lang/tk-8.4* + ) + dev-lang/perl + dev-python/numpy + sci-libs/netcdf + virtual/opengl + >=x11-libs/fltk-1.1.10-r2:1 + x11-libs/libXft + x11-libs/libXi + cuda? ( >=dev-util/nvidia-cuda-toolkit-3.1 ) + xinerama? ( x11-libs/libXinerama )" +DEPEND="${CDEPEND} + dev-lang/swig" +RDEPEND="${CDEPEND} + sci-biology/stride + sci-chemistry/surf + x11-terms/xterm + msms? ( sci-chemistry/msms-bin ) + povray? ( media-gfx/povray ) + tachyon? ( media-gfx/tachyon )" + +VMD_DOWNLOAD="http://www.ks.uiuc.edu/Development/Download/download.cgi?PackageName=VMD" +# Binary only plugin!! +QA_TEXTRELS="usr/lib*/vmd/plugins/LINUX/tcl/intersurf1.1/bin/intersurf.so" +QA_PRESTRIPPED="usr/lib*/vmd/plugins/LINUX/tcl/intersurf1.1/bin/intersurf.so" +QA_DT_HASH_amd64="usr/lib64/vmd/plugins/LINUX/tcl/intersurf1.1/bin/intersurf.so" +QA_DT_HASH_x86="usr/lib/vmd/plugins/LINUX/tcl/intersurf1.1/bin/intersurf.so" + +pkg_nofetch() { + elog "Please download ${P}.src.tar.gz from" + elog "${VMD_DOWNLOAD}" + elog "after agreeing to the license and get" + elog "http://dev.gentoo.org/~jlec/distfiles/${P}-gentoo-patches.tar.xz" + elog "Place both in ${DISTDIR}" +} + +src_prepare() { + cd "${WORKDIR}"/plugins + + epatch "${WORKDIR}"/${P}-gentoo-plugins.patch + + [[ ${SILENT} == yes ]] || sed '/^.SILENT/d' -i $(find -name Makefile) + + sed -e "s:CC = gcc:CC = $(tc-getCC):" \ + -e "s:CXX = g++:CXX = $(tc-getCXX):" \ + -e "s:COPTO =.*\":COPTO = -fPIC -o\":" \ + -e "s:LOPTO = .*\":LOPTO = ${LDFLAGS} -fPIC -o\":" \ + -e "s:CCFLAGS =.*\":CCFLAGS = ${CFLAGS}\":" \ + -e "s:CXXFLAGS =.*\":CXXFLAGS = ${CXXFLAGS}\":" \ + -e "s:SHLD = gcc:SHLD = $(tc-getCC) -shared:" \ + -e "s:SHXXLD = g++:SHXXLD = $(tc-getCXX) -shared:" \ + -e "s:-ltcl8.5:-ltcl:" \ + -i Make-arch || die "Failed to set up plugins Makefile" + + sed -e "s:\$(CXXFLAGS)::g" \ + -i hesstrans/Makefile || die + + # prepare vmd itself + cd "${S}" + + epatch "${WORKDIR}"/${P}-gentoo-base.patch + + # PREFIX + sed \ + -e "s:/usr/include/:${EPREFIX}/usr/include:g" \ + -i configure || die + + sed \ + -e "s:gentoo-bindir:${ED}/usr/bin:g" \ + -e "s:gentoo-libdir:${ED}/usr/$(get_libdir):g" \ + -e "s:gentoo-opengl-include:${EPREFIX}/usr/include/GL:g" \ + -e "s:gentoo-opengl-libs:${EPREFIX}/usr/$(get_libdir):g" \ + -e "s:gentoo-gcc:$(tc-getCC):g" \ + -e "s:gentoo-g++:$(tc-getCXX):g" \ + -e "s:gentoo-nvcc:${EPREFIX}/opt/cuda/bin/nvcc:g" \ + -e "s:gentoo-cflags:${CFLAGS}:g" \ + -e "s:gentoo-cxxflags:${CXXFLAGS}:g" \ + -e "s:gentoo-nvflags: -O3 -v:g" \ + -e "s:gentoo-ldflags:${LDFLAGS}:g" \ + -e "s:gentoo-plugindir:${WORKDIR}/plugins:g" \ + -e "s:gentoo-fltk-include:$(fltk-config --includedir):g" \ + -e "s:gentoo-fltk-libs:$(dirname $(fltk-config --libs)) -Wl,-rpath,$(dirname $(fltk-config --libs)):g" \ + -e "s:gentoo-netcdf-include:${EPREFIX}/usr/include:g" \ + -e "s:gentoo-netcdf-libs:${EPREFIX}/usr/$(get_libdir):g" \ + -i configure || die + +# local NUMPY_INCLUDE="numpy/core/include" +# sed -e "s:gentoo-python-include:${EPREFIX}$(python_get_includedir):" \ +# -e "s:gentoo-python-lib:${EPREFIX}$(python_get_libdir):" \ +# -e "s:gentoo-python-link:$(PYTHON):" \ +# -e "s:gentoo-numpy-include:${EPREFIX}$(python_get_sitedir)/${NUMPY_INCLUDE}:" \ +# -i configure || die "failed setting up python" + + if use cuda; then + local gcc_bindir="${EPREFIX}$(gcc-config -B)" + + sed \ + -e "s:gentoo-cuda-lib:${EPREFIX}/opt/cuda/$(get_libdir):g" \ + -e "/^\$arch_nvccflags/s:=:= \"--compiler-bindir=${gcc_bindir} \" . \n:1" \ + -i configure || die + fi + + sed \ + -e "s:LINUXPPC:LINUX:g" \ + -e "s:LINUXALPHA:LINUX:g" \ + -e "s:LINUXAMD64:LINUX:g" \ + -e "s:gentoo-stride:${EPREFIX}/usr/bin/stride:g" \ + -e "s:gentoo-surf:${EPREFIX}/usr/bin/surf:g" \ + -e "s:gentoo-tachyon:${EPREFIX}/usr/bin/tachyon:g" \ + -i "${S}"/bin/vmd.sh || die "failed setting up vmd wrapper script" +} + +src_configure() { + local myconf="OPENGL FLTK TK TCL PTHREADS PYTHON IMD NETCDF NUMPY NOSILENT XINPUT" + rm -f configure.options && echo $myconf >> configure.options + + use cuda && myconf+=" CUDA" +# use mpi && myconf+=" MPI" +# use tachion && myconf+=" LIBTACHYON" + use xinerama && myconf+=" XINERAMA" + + export \ + PYTHON_INCLUDE_DIR="${EPREFIX}$(python_get_includedir)" \ + PYTHON_LIBRARY_DIR="${EPREFIX}$(python_get_libdir)" \ + PYTHON_LIBRARY="$(python_get_library -l)" \ + NUMPY_INCLUDE_DIR="${EPREFIX}$(python_get_sitedir)/numpy/core/include" \ + NUMPY_LIBRARY_DIR="${EPREFIX}$(python_get_sitedir)/numpy/core/include" + + ./configure LINUX \ + ${myconf} || die +} + +src_compile() { + # build plugins + cd "${WORKDIR}"/plugins + + emake \ + TCLINC="-I${EPREFIX}/usr/include" \ + TCLLIB="-L${EPREFIX}/usr/$(get_libdir)" \ + NETCDFLIB="$(pkg-config --libs-only-L netcdf)" \ + NETCDFINC="$(pkg-config --cflags-only-I netcdf)" \ + NETCDFLDFLAGS="$(pkg-config --libs netcdf)" \ + LINUX || die + + # build vmd + cd "${S}"/src + emake || die "failed to build vmd" +} + +src_install() { + # install plugins + cd "${WORKDIR}"/plugins + emake \ + PLUGINDIR="${ED}/usr/$(get_libdir)/${PN}/plugins" \ + distrib || die "failed to install plugins" + + # install vmd + cd "${S}"/src + emake install || die "failed to install vmd" + + # install docs + cd "${S}" + dodoc Announcement README doc/ig.pdf doc/ug.pdf || die + + # remove some of the things we don't want and need in + # /usr/lib + cd "${ED}"/usr/$(get_libdir)/vmd + rm -fr doc README Announcement LICENSE || \ + die "failed to clean up /usr/lib/vmd directory" + + # adjust path in vmd wrapper + sed \ + -e "s:${ED}::" -i "${ED}"/usr/bin/${PN} \ + -e "/^defaultvmddir/s:^.*$:defaultvmddir=\"${EPREFIX}/usr/$(get_libdir)/${PN}\":g" \ + || die "failed to set up vmd wrapper script" + + # install icon and generate desktop entry + insinto /usr/share/pixmaps + doins "${WORKDIR}"/vmd.png || die "Failed to install vmd icon" + insinto /usr/share/applications + doins "${WORKDIR}"/vmd.desktop || die "Failed to install desktop entry" +} |