2017-02-05T05:40:01Z

1 files changed, 157 insertions, 1 deletions

diff --git a/science.txt b/science.txt
index f6504703100d..39ae3fa7ed56 100644
--- a/science.txt
+++ b/science.txt
@@ -21,7 +21,163 @@ WARNING:pkgcore:repo at '/home/mgorny/sync/hanno', named 'hanno', doesn't specif
 WARNING:pkgcore:repo at '/home/mgorny/sync/steveeJ' has unsupported profile format: profile-set
 WARNING:pkgcore:repo at '/home/mgorny/sync/xelnor' has unsupported profile format: profile-set
 WARNING:pkgcore:repo at '/home/mgorny/sync/xelnor' has unsupported profile format: profile-set
-Already up-to-date.
+From git://anongit.gentoo.org/proj/sci
+   a48633c6d..d656b6d1c  master     -> origin/master
+Updating a48633c6d..d656b6d1c
+Fast-forward
+ app-doc/lapack-docs/lapack-docs-3.3-r1.ebuild              |  2 +-
+ dev-java/fits/fits-1.11.0-r1.ebuild                        |  2 +-
+ dev-java/htsjdk/htsjdk-2.1.0.ebuild                        |  4 ++--
+ dev-java/htsjdk/htsjdk-2.2.2.ebuild                        |  4 ++--
+ dev-java/htsjdk/htsjdk-2.5.1.ebuild                        |  4 ++--
+ dev-java/htsjdk/htsjdk-9999.ebuild                         |  4 ++--
+ dev-python/matplotlib-venn/matplotlib-venn-9999.ebuild     |  2 +-
+ dev-python/omniorbpy/omniorbpy-3.4.ebuild                  |  2 +-
+ sci-biology/AlignGraph/AlignGraph-9999.ebuild              |  2 +-
+ sci-biology/TransDecoder/TransDecoder-2.0.1.ebuild         |  2 +-
+ sci-biology/TransDecoder/TransDecoder-2.1.0.ebuild         |  2 +-
+ sci-biology/aghermann/aghermann-1.1.2.ebuild               |  2 +-
+ sci-biology/arachne/arachne-46233.ebuild                   |  4 ++--
+ sci-biology/argo/argo-1.0.24.ebuild                        |  2 +-
+ sci-biology/artemis/artemis-9999.ebuild                    |  2 +-
+ sci-biology/beagle/beagle-4.0.ebuild                       |  2 +-
+ sci-biology/bismark/bismark-0.13.0.ebuild                  |  2 +-
+ sci-biology/blue/blue-1.1.2.ebuild                         |  4 ++--
+ sci-biology/blue/blue-1.1.3.ebuild                         |  4 ++--
+ sci-biology/cdbfasta/cdbfasta-0.1.ebuild                   |  2 +-
+ sci-biology/clview/clview-0.1.ebuild                       |  2 +-
+ sci-biology/cnrun/cnrun-2.1.0.ebuild                       |  2 +-
+ sci-biology/cortex_var/cortex_var-1.0.5.21.ebuild          |  2 +-
+ sci-biology/exomiser-bin/exomiser-bin-7.2.1.ebuild         |  2 +-
+ sci-biology/fastqc/fastqc-0.11.3.ebuild                    |  4 ++--
+ sci-biology/ffindex/ffindex-0.9.9.6.ebuild                 |  2 +-
+ sci-biology/fsa/fsa-1.15.9.ebuild                          |  4 ++--
+ sci-biology/generecon/generecon-1.2.1-r1.ebuild            |  2 +-
+ sci-biology/genometools/genometools-1.5.7.ebuild           |  2 +-
+ sci-biology/genseed/genseed-1.0.22.ebuild                  |  2 +-
+ sci-biology/hydra-sv/hydra-sv-0.5.3.ebuild                 |  2 +-
+ sci-biology/kmergenie/kmergenie-1.6971.ebuild              |  2 +-
+ sci-biology/lastz/lastz-1.03.66.ebuild                     |  2 +-
+ sci-biology/maker/maker-2.31.8.ebuild                      | 14 +++++++-------
+ sci-biology/manatee-jcvi/manatee-jcvi-2.4.3.ebuild         |  2 +-
+ sci-biology/mgblast/mgblast-0.1.ebuild                     |  2 +-
+ sci-biology/mira/mira-4.9.5.ebuild                         |  2 +-
+ sci-biology/mne-python/mne-python-0.7.ebuild               |  2 +-
+ sci-biology/mne-python/mne-python-9999.ebuild              |  2 +-
+ sci-biology/ncbi-blast+/ncbi-blast+-2.2.30.ebuild          | 12 ++++++------
+ sci-biology/ncbi-blast+/ncbi-blast+-2.2.31.ebuild          | 12 ++++++------
+ sci-biology/ncbi-blast+/ncbi-blast+-2.3.0.ebuild           | 12 ++++++------
+ sci-biology/ncbi-tools++/ncbi-tools++-12.0.0.ebuild        | 12 ++++++------
+ sci-biology/ngsview/ngsview-0.91.ebuild                    |  2 +-
+ sci-biology/nireg/nireg-9999.ebuild                        |  2 +-
+ sci-biology/perlprimer/perlprimer-1.1.21.ebuild            |  2 +-
+ sci-biology/picard/picard-1.141.ebuild                     |  2 +-
+ sci-biology/picard/picard-2.2.2.ebuild                     |  2 +-
+ sci-biology/picard/picard-2.8.1.ebuild                     |  6 +++---
+ sci-biology/picard/picard-9999.ebuild                      |  2 +-
+ sci-biology/pileup/pileup-0.6.ebuild                       |  4 ++--
+ sci-biology/prinseq-lite/prinseq-lite-0.20.4.ebuild        |  2 +-
+ sci-biology/psychopy/psychopy-1.84.0.ebuild                |  2 +-
+ sci-biology/psychopy/psychopy-1.84.1.ebuild                |  2 +-
+ sci-biology/psychopy/psychopy-1.84.2.ebuild                |  2 +-
+ sci-biology/psychopy/psychopy-9999.ebuild                  |  2 +-
+ sci-biology/pysam/pysam-0.7.5.ebuild                       |  2 +-
+ sci-biology/pysurfer/pysurfer-0.4.ebuild                   |  2 +-
+ sci-biology/pysurfer/pysurfer-0.6.ebuild                   |  2 +-
+ sci-biology/pysurfer/pysurfer-9999.ebuild                  |  2 +-
+ sci-biology/repeatmasker/repeatmasker-4.0.6-r3.ebuild      |  2 +-
+ .../roche454ace2caf/roche454ace2caf-20100812.ebuild        |  2 +-
+ sci-biology/sailfish/sailfish-0.9.2.ebuild                 |  2 +-
+ sci-biology/samstat/samstat-20130708.ebuild                |  2 +-
+ sci-biology/samtools/samtools-1.0-r2.ebuild                |  2 +-
+ sci-biology/samtools/samtools-1.1-r1.ebuild                |  2 +-
+ sci-biology/samtools/samtools-1.2-r1.ebuild                |  2 +-
+ .../scaffold_builder/scaffold_builder-20131122-r1.ebuild   |  2 +-
+ sci-biology/sclust/sclust-0.1.ebuild                       |  2 +-
+ sci-biology/sequin/sequin-20121202.ebuild                  |  2 +-
+ sci-biology/sgp2/sgp2-1.1.ebuild                           |  2 +-
+ sci-biology/sickle/sickle-1.33.ebuild                      |  2 +-
+ sci-biology/sickle/sickle-9999.ebuild                      |  2 +-
+ sci-biology/skewer-bin/skewer-bin-0.1.104.ebuild           |  2 +-
+ sci-biology/smalt-bin/smalt-bin-0.7.4.ebuild               |  2 +-
+ sci-biology/somatic-sniper/somatic-sniper-1.0.4.ebuild     |  2 +-
+ sci-biology/stacks/stacks-1.44.ebuild                      |  2 +-
+ sci-biology/subread/subread-1.4.6.ebuild                   |  2 +-
+ sci-biology/symap/symap-4.0.ebuild                         |  2 +-
+ sci-biology/tgicl/tgicl-2.1.ebuild                         |  4 ++--
+ sci-biology/trowel/trowel-0.1.4.1.ebuild                   |  2 +-
+ sci-biology/ugene/ugene-1.20.0.ebuild                      |  2 +-
+ sci-biology/wgs-assembler/wgs-assembler-8.3_rc2.ebuild     |  2 +-
+ sci-chemistry/chooch/chooch-5.0.2-r1.ebuild                |  2 +-
+ sci-chemistry/concoord/concoord-2.1.2.ebuild               |  2 +-
+ sci-chemistry/concoord/concoord-2.1.ebuild                 |  2 +-
+ sci-chemistry/gamess/gamess-20161808.1.ebuild              |  2 +-
+ .../gnome-chemistry-utils-0.14.2-r1.ebuild                 |  2 +-
+ .../gnome-chemistry-utils-9999.ebuild                      |  2 +-
+ sci-chemistry/mage/mage-6.44.060606.ebuild                 |  2 +-
+ sci-chemistry/mddnmr/mddnmr-2.4-r1.ebuild                  |  2 +-
+ sci-chemistry/modelfree/modelfree-4.20.ebuild              |  2 +-
+ sci-chemistry/mtz2hkl/mtz2hkl-0.3.ebuild                   |  2 +-
+ sci-chemistry/redcat/redcat-3.ebuild                       |  2 +-
+ sci-chemistry/rosetta/rosetta-3.4.ebuild                   |  2 +-
+ sci-chemistry/shiftx2/shiftx2-1.07_p20120106.ebuild        |  2 +-
+ sci-chemistry/talosn/talosn-4.01.2013.148.15.55-r3.ebuild  |  2 +-
+ sci-chemistry/talosn/talosn-4.12.2015.147.15.40.ebuild     |  2 +-
+ sci-electronics/tnt/tnt-1.2.2.ebuild                       |  2 +-
+ .../pydap_handlers_cdms/pydap_handlers_cdms-0.2.0.1.ebuild |  2 +-
+ sci-libs/asl/asl-0.1.7.ebuild                              |  2 +-
+ sci-libs/asl/asl-9999.ebuild                               |  2 +-
+ sci-libs/factory/factory-3.1.1-r2.ebuild                   |  2 +-
+ sci-libs/givaro/givaro-3.2.13.ebuild                       |  2 +-
+ sci-libs/givaro/givaro-3.3.0.ebuild                        |  2 +-
+ sci-libs/givaro/givaro-3.8.0.ebuild                        |  2 +-
+ sci-libs/gotoblas2/gotoblas2-1.13-r1.ebuild                |  2 +-
+ sci-libs/io_lib/io_lib-1.14.7.ebuild                       |  2 +-
+ sci-libs/ipp/ipp-8.2.2.187-r1.ebuild                       |  2 +-
+ sci-libs/omalloc/omalloc-0.9.6.ebuild                      |  2 +-
+ sci-libs/openblas/openblas-0.2.14.ebuild                   |  2 +-
+ sci-libs/openblas/openblas-0.2.15.ebuild                   |  2 +-
+ sci-libs/parmetis/parmetis-4.0.3.ebuild                    |  2 +-
+ sci-libs/symmetrica/symmetrica-2.0-r1.ebuild               |  2 +-
+ sci-libs/symmetrica/symmetrica-2.0.ebuild                  |  2 +-
+ sci-libs/vxl/vxl-9999.ebuild                               |  2 +-
+ sci-mathematics/apron/apron-0.9.10-r1.ebuild               |  4 ++--
+ sci-mathematics/cadabra/cadabra-1.39.ebuild                |  2 +-
+ sci-mathematics/flocq/flocq-2.3.0.ebuild                   |  2 +-
+ sci-mathematics/frama-c/frama-c-20140301.ebuild            |  2 +-
+ sci-mathematics/gappa/gappa-1.1.1.ebuild                   |  2 +-
+ sci-mathematics/gappalib-coq/gappalib-coq-1.0.0.ebuild     |  2 +-
+ sci-mathematics/giac/giac-1.1.0.ebuild                     |  2 +-
+ sci-mathematics/gismo/gismo-0.8.1.ebuild                   |  2 +-
+ sci-mathematics/ltl2ba/ltl2ba-1.1.ebuild                   |  2 +-
+ sci-mathematics/pff/pff-8.4.ebuild                         |  2 +-
+ sci-misc/elmer-gui/elmer-gui-9999.ebuild                   |  2 +-
+ sci-misc/kaldi/kaldi-0_p20151106.ebuild                    |  2 +-
+ sci-misc/mitlm/mitlm-0.4.1.ebuild                          |  4 ++--
+ sci-misc/openfst/openfst-1.3.4.ebuild                      |  2 +-
+ sci-misc/openfst/openfst-1.4.1.ebuild                      |  2 +-
+ sci-physics/abinit/abinit-7.10.4.ebuild                    |  2 +-
+ sci-physics/abinit/abinit-7.4.2-r1.ebuild                  |  2 +-
+ sci-physics/abinit/abinit-7.6.4-r1.ebuild                  |  2 +-
+ sci-physics/mc-tester/mc-tester-1.25.0.ebuild              |  2 +-
+ sci-physics/openmx/openmx-3.6.ebuild                       |  2 +-
+ sci-physics/openmx/openmx-3.7.8.ebuild                     |  2 +-
+ sci-visualization/mricrogl/mricrogl-1.0.20151111.ebuild    |  2 +-
+ sci-visualization/mricron/mricron-9999.ebuild              |  2 +-
+ sys-cluster/empi/empi-0.10.ebuild                          |  2 +-
+ sys-cluster/mpich/mpich-3.0.4.ebuild                       |  2 +-
+ sys-cluster/mpich/mpich-3.1.3-r2.ebuild                    |  2 +-
+ sys-cluster/mpich/mpich-3.1.4-r1.ebuild                    |  2 +-
+ sys-cluster/mpich/mpich-3.2-r1.ebuild                      |  2 +-
+ sys-cluster/mpich/mpich-3.2-r2.ebuild                      |  2 +-
+ sys-cluster/mpich2/mpich2-1.5.ebuild                       |  2 +-
+ sys-cluster/mvapich2/mvapich2-1.6-r1.ebuild                |  2 +-
+ sys-cluster/openmpi/openmpi-1.10.3-r2.ebuild               |  2 +-
+ sys-cluster/openmpi/openmpi-1.8.8.ebuild                   |  2 +-
+ sys-cluster/openmpi/openmpi-2.0.2.ebuild                   |  2 +-
+ x11-libs/agg/agg-2.5-r3.ebuild                             |  2 +-
+ x11-libs/xview/xview-3.2-r8.ebuild                         |  2 +-
+ 152 files changed, 193 insertions(+), 193 deletions(-)
 *** syncing science
 *** synced science
  * Sync succeeded