blob: 47e67a964a4ae1b4e29d7c65171c09549b784a62 (
plain)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
|
# Copyright 1999-2012 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
EAPI=4
inherit eutils toolchain-funcs
MY_PN="MUSTANG"
SRC_P="${PN}_v${PV}"
MY_P="${MY_PN}_v${PV}"
DESCRIPTION="MUltiple STructural AligNment AlGorithm"
HOMEPAGE="http://www.csse.monash.edu.au/~karun/Site/mustang.html"
SRC_URI="http://www.csse.unimelb.edu.au/~arun/${PN}/${SRC_P}.tgz"
LICENSE="BSD"
SLOT="0"
KEYWORDS="amd64 x86 ~amd64-linux ~x86-linux"
IUSE=""
S="${WORKDIR}/${MY_P}"
src_prepare() {
epatch "${FILESDIR}"/${P}-gcc-4.7.patch
}
src_compile() {
emake \
CPP=$(tc-getCXX) \
CPPFLAGS="${CXXFLAGS}" \
LDFLAGS="${LDFLAGS}"
}
src_test() {
./bin/${P} -f ./data/test/test_zf-CCHH || die
}
src_install() {
newbin bin/${P} mustang
doman man/${PN}.1
dodoc README
}
pkg_postinst() {
elog "If you use this program for an academic paper, please cite:"
elog "Arun S. Konagurthu, James C. Whisstock, Peter J. Stuckey, and Arthur M. Lesk"
elog "Proteins: Structure, Function, and Bioinformatics. 64(3):559-574, Aug. 2006"
}
|
GitWeb
