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* sci-libs/cartopy: add 0.20.2Thomas Beierlein2022-03-272-0/+71
| | | | Signed-off-by: Thomas Beierlein <tomjbe@gentoo.org>
* sci-libs/rocFFT: bump version to 5.0.2YiyangWu2022-03-275-0/+219
| | | | | | | | | Enable benchmark and perfscript USE flags. Closes: https://github.com/gentoo/gentoo/pull/24726 Package-Manager: Portage-3.0.30, Repoman-3.0.3 Signed-off-by: Yiyang Wu <xgreenlandforwyy@gmail.com> Signed-off-by: Benda Xu <heroxbd@gentoo.org>
* sci-libs/rocBLAS: bump version to 5.0.2YiyangWu2022-03-275-0/+259
| | | | | | | | | | | Enable nai22 chips (Radeon RX 6700/6700 XT / 6800M, gfx1031) fix test issue when PORTAGE_USERNAME is not portage: "[: too many arguments" Closes: https://bugs.gentoo.org/834672 Package-Manager: Portage-3.0.30, Repoman-3.0.3 Signed-off-by: Yiyang Wu <xgreenlandforwyy@gmail.com> Signed-off-by: Benda Xu <heroxbd@gentoo.org>
* sci-libs/coinor-clp: add REQUIRED_USEAndrew Ammerlaan2022-03-261-12/+15
| | | | | | | | - mpi does nothing if mumps is disabled - rewrite doc building - add missing || die Signed-off-by: Andrew Ammerlaan <andrewammerlaan@gentoo.org>
* sci-libs/scotch: fix build with USE=mpiAndrew Ammerlaan2022-03-261-2/+1
| | | | | | Closes: https://bugs.gentoo.org/835914 Signed-off-by: Andrew Ammerlaan <andrewammerlaan@gentoo.org>
* sci-libs/coinor-clp: EAPI 8, restore old mpi behaviourAlessandro Barbieri2022-03-262-0/+161
| | | | | | Signed-off-by: Alessandro Barbieri <lssndrbarbieri@gmail.com> Closes: https://github.com/gentoo/gentoo/pull/21968 Signed-off-by: Andrew Ammerlaan <andrewammerlaan@gentoo.org>
* sci-libs/gmsh: disable py3.7Andrew Ammerlaan2022-03-261-1/+1
| | | | Signed-off-by: Andrew Ammerlaan <andrewammerlaan@gentoo.org>
* sci-libs/gmsh: remove unused patch(es)Michael Mair-Keimberger2022-03-261-80/+0
| | | | | | | Package-Manager: Portage-3.0.30, Repoman-3.0.3 Signed-off-by: Michael Mair-Keimberger <mmk@levelnine.at> Closes: https://github.com/gentoo/gentoo/pull/24532 Signed-off-by: Andrew Ammerlaan <andrewammerlaan@gentoo.org>
* sci-libs/stellarsolver: Fix vasprintf implicit declaration warningAndreas Sturmlechner2022-03-252-0/+91
| | | | | | | Upstream commit acb58bd78388adec25eb6e09ce6434546de008b8 Package-Manager: Portage-3.0.30, Repoman-3.0.3 Signed-off-by: Andreas Sturmlechner <asturm@gentoo.org>
* sci-libs/stellarsolver: 2.2 version bumpAndreas Sturmlechner2022-03-252-0/+28
| | | | | Package-Manager: Portage-3.0.30, Repoman-3.0.3 Signed-off-by: Andreas Sturmlechner <asturm@gentoo.org>
* sci-libs/indilib: 1.9.5.1 version bumpAndreas Sturmlechner2022-03-252-0/+70
| | | | | Package-Manager: Portage-3.0.30, Repoman-3.0.3 Signed-off-by: Andreas Sturmlechner <asturm@gentoo.org>
* sci-libs/libgeotiff: update CMake patchSam James2022-03-222-1/+23
| | | | Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/libigl: amd64 stable wrt bug #835628Agostino Sarubbo2022-03-211-1/+1
| | | | | | Package-Manager: Portage-3.0.30, Repoman-3.0.3 RepoMan-Options: --include-arches="amd64" Signed-off-by: Agostino Sarubbo <ago@gentoo.org>
* sci-libs/xgks-pmel: [QA] fix tc-get* quotingSam James2022-03-201-3/+3
| | | | | | This can cause build problems for e.g. 32-bit (gcc -m32 ...) Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/superlu_mt: [QA] fix tc-get* quotingSam James2022-03-201-2/+2
| | | | | | This can cause build problems for e.g. 32-bit (gcc -m32 ...) Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/profphd-utils: [QA] fix tc-get* quotingSam James2022-03-201-2/+2
| | | | | | This can cause build problems for e.g. 32-bit (gcc -m32 ...) Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/profnet: [QA] fix tc-get* quotingSam James2022-03-201-2/+2
| | | | | | This can cause build problems for e.g. 32-bit (gcc -m32 ...) Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/openblas: [QA] fix tc-get* quotingSam James2022-03-203-4/+4
| | | | | | This can cause build problems for e.g. 32-bit (gcc -m32 ...) Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/libint: [QA] fix tc-get* quotingSam James2022-03-202-9/+9
| | | | | | This can cause build problems for e.g. 32-bit (gcc -m32 ...) Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/cqrlib: [QA] fix tc-get* quotingSam James2022-03-201-5/+5
| | | | | | This can cause build problems for e.g. 32-bit (gcc -m32 ...) Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/cdf: [QA] fix tc-get* quotingSam James2022-03-201-4/+4
| | | | | | This can cause build problems for e.g. 32-bit (gcc -m32 ...) Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/rocSPARSE: remove unused cmake variableYiyangWu2022-03-202-124/+2
| | | | | | | | | | | | __skip_rocmclang is used to avoid configuration error for cmake-3.21.(1|2), which don't exist among ebuilds anymore, so this flag is not recognized. Closes: https://github.com/gentoo/gentoo/pull/23448 Closes: https://bugs.gentoo.org/829076 Package-Manager: Portage-3.0.22, Repoman-3.0.3 Signed-off-by: Yiyang Wu <xgreenlandforwyy@gmail.com> Signed-off-by: Benda Xu <heroxbd@gentoo.org>
* sci-libs/rocPRIM: remove unused cmake variableYiyangWu2022-03-201-2/+2
| | | | | | | | | | | | __skip_rocmclang is used to avoid configuration error for cmake-3.21.(1|2), which don't exist among ebuilds anymore, so this flag is not recognized. Closes: https://github.com/gentoo/gentoo/pull/23447 Closes: https://bugs.gentoo.org/829075 Package-Manager: Portage-3.0.22, Repoman-3.0.3 Signed-off-by: Yiyang Wu <xgreenlandforwyy@gmail.com> Signed-off-by: Benda Xu <heroxbd@gentoo.org>
* sci-libs/rocFFT: remove unused cmake variableYiyangWu2022-03-201-3/+3
| | | | | | | | | | | | __skip_rocmclang is used to avoid configuration error for cmake-3.21.(1|2), which don't exist among ebuilds anymore, so this flag is not recognized. Closes: https://github.com/gentoo/gentoo/pull/23446 Closes: https://bugs.gentoo.org/829326 Package-Manager: Portage-3.0.22, Repoman-3.0.3 Signed-off-by: Yiyang Wu <xgreenlandforwyy@gmail.com> Signed-off-by: Benda Xu <heroxbd@gentoo.org>
* sci-libs/rocBLAS-4.3.0: re-enable Tensile libraryYiyangWu2022-03-202-24/+1
| | | | | | | | | | | | | 890148bb81f517304f86f41303534b0abaa7c77c disables compiling Tensile library (maybe due to dev-util/Tensile not properly configured). After correcting paths in Tensile, compiling libraries ican be re-enabled. Also fix test fail due to library not found Closes: https://github.com/gentoo/gentoo/pull/24679 Package-Manager: Portage-3.0.30, Repoman-3.0.3 Signed-off-by: Yiyang Wu <xgreenlandforwyy@gmail.com> Signed-off-by: Benda Xu <heroxbd@gentoo.org>
* sci-libs/libgeotiff: add 1.7.1Sam James2022-03-203-0/+152
| | | | Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/htslib: add 1.15David Seifert2022-03-192-0/+53
| | | | Signed-off-by: David Seifert <soap@gentoo.org>
* sci-libs/libigl: add 2.4.0Matthew Smith2022-03-192-0/+58
| | | | | | Tested with media-gfx/prusaslicer-2.4.0-r2. Signed-off-by: Matthew Smith <matthew@gentoo.org>
* sci-libs/libigl: update LICENSEMatthew Smith2022-03-191-2/+2
| | | | Signed-off-by: Matthew Smith <matthew@gentoo.org>
* sci-libs/libcifpp: Keyword 3.0.0 x86, #834864Jakov Smolić2022-03-171-2/+2
| | | | Signed-off-by: Jakov Smolić <jsmolic@gentoo.org>
* sci-libs/opencascade: add link to ffmpeg bugSam James2022-03-164-0/+4
| | | | Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/opencascade: drop glibc RDEPENDSam James2022-03-162-4/+0
| | | | | | | | | Not needed, we're masking on musl profiles, and this isn't a binary package. It could one day work on non-glibc and an RDEPEND makes it trickier to test on musl. Bug: https://bugs.gentoo.org/832742 Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/opencascade: backport fixes from v7.6.1Bernd Waibel2022-03-161-1/+3
| | | | | | | | | | | | | Package is not yet compatible with ffmpeg-5, so we restrict to <media-video/ffmpeg-5. Reported upstream. Not compatible with musl libc implementation, so we explicitly DEPEND on sys-libs/glibc. Closes: https://bugs.gentoo.org/832742 Closes: https://bugs.gentoo.org/834422 Signed-off-by: Bernd Waibel <waebbl-gentoo@posteo.net> Closes: https://github.com/gentoo/gentoo/pull/24525 Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/opencascade: bump to 7.6.1Bernd Waibel2022-03-162-0/+170
| | | | | | | | | | | | | Package is not yet compatible with ffmpeg-5, so we restrict to <media-video/ffmpeg-5. Reported upstream. Not compatible with musl libc implementation, so we explicitly DEPEND on sys-libs/glibc. Closes: https://bugs.gentoo.org/835040 Bug: https://bugs.gentoo.org/832742 Bug: https://bugs.gentoo.org/834422 Signed-off-by: Bernd Waibel <waebbl-gentoo@posteo.net> Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/indilib: Drop 1.9.3Andreas Sturmlechner2022-03-162-70/+0
| | | | | Package-Manager: Portage-3.0.30, Repoman-3.0.3 Signed-off-by: Andreas Sturmlechner <asturm@gentoo.org>
* sci-libs/geos: add 3.10.2Sam James2022-03-142-0/+44
| | | | Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/gdal: add 3.4.2Sam James2022-03-142-0/+328
| | | | | Closes: https://bugs.gentoo.org/752399 Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/gdal: Fix build with >=app-text/poppler-22.03.0Andreas Sturmlechner2022-03-122-2/+56
| | | | | | Closes: https://bugs.gentoo.org/834536 Package-Manager: Portage-3.0.30, Repoman-3.0.3 Signed-off-by: Andreas Sturmlechner <asturm@gentoo.org>
* sci-libs/gmsh: fix dependencyMatthias Maier2022-03-111-1/+1
| | | | | Closes: https://bugs.gentoo.org/801295 Signed-off-by: Matthias Maier <tamiko@gentoo.org>
* sci-libs/gmsh: add 4.9.5, drop 4.8.4Matthias Maier2022-03-112-8/+7
| | | | | | | | | | | | - bump to EAPI=8 - add missing python versions - port to cmake eclass Closes: https://bugs.gentoo.org/832253 Closes: https://bugs.gentoo.org/811960 Bug: https://bugs.gentoo.org/801295 Signed-off-by: Matthias Maier <tamiko@gentoo.org>
* sci-libs/rtree: Stabilize 0.9.7 amd64, #834389Jakov Smolić2022-03-101-1/+1
| | | | Signed-off-by: Jakov Smolić <jsmolic@gentoo.org>
* sci-libs/qd: [QA] fix UnusedInherits (autotools)Sam James2022-03-101-2/+2
| | | | Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/netcdf-cxx: [QA] fix UnusedInherits (autotools)Sam James2022-03-101-3/+1
| | | | Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/ipopt: [QA] fix UnusedInherits (autotools)Sam James2022-03-101-2/+2
| | | | Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/ignition-math: bump to 6.10.0Alexis Ballier2022-03-092-2/+2
| | | | | Package-Manager: Portage-3.0.30, Repoman-3.0.3 Signed-off-by: Alexis Ballier <aballier@gentoo.org>
* sci-libs/symengine: x86 stable wrt bug #829213Agostino Sarubbo2022-03-091-1/+1
| | | | | | Package-Manager: Portage-3.0.30, Repoman-3.0.3 RepoMan-Options: --include-arches="x86" Signed-off-by: Agostino Sarubbo <ago@gentoo.org>
* sci-libs/pcl: bump to 1.12.1Alexis Ballier2022-03-082-0/+84
| | | | | Package-Manager: Portage-3.0.30, Repoman-3.0.3 Signed-off-by: Alexis Ballier <aballier@gentoo.org>
* sci-libs/symengine: amd64 stable wrt bug #829213Agostino Sarubbo2022-03-071-1/+1
| | | | | | Package-Manager: Portage-3.0.30, Repoman-3.0.3 RepoMan-Options: --include-arches="amd64" Signed-off-by: Agostino Sarubbo <ago@gentoo.org>
* sci-libs/parmetis: drop 4.0.3-r1Sam James2022-03-073-160/+0
| | | | | Closes: https://bugs.gentoo.org/816579 Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/parmetis: Stabilize 4.0.3-r2 arm64, #816579Sam James2022-03-071-1/+1
| | | | Signed-off-by: Sam James <sam@gentoo.org>