diff options
Diffstat (limited to 'sci-biology/vcftools/vcftools-0.1.12b.ebuild')
-rw-r--r-- | sci-biology/vcftools/vcftools-0.1.12b.ebuild | 45 |
1 files changed, 0 insertions, 45 deletions
diff --git a/sci-biology/vcftools/vcftools-0.1.12b.ebuild b/sci-biology/vcftools/vcftools-0.1.12b.ebuild deleted file mode 100644 index ddc214c430c0..000000000000 --- a/sci-biology/vcftools/vcftools-0.1.12b.ebuild +++ /dev/null @@ -1,45 +0,0 @@ -# Copyright 1999-2015 Gentoo Foundation -# Distributed under the terms of the GNU General Public License v2 -# $Id$ - -EAPI=5 - -PERL_EXPORT_PHASE_FUNCTIONS=no -inherit perl-module eutils toolchain-funcs - -MY_P="${PN}_${PV}" - -DESCRIPTION="Tools for working with VCF (Variant Call Format) files" -HOMEPAGE="http://vcftools.sourceforge.net/" -SRC_URI="mirror://sourceforge/${PN}/${MY_P}.tar.gz" - -LICENSE="LGPL-3" -SLOT="0" -KEYWORDS="~x86 ~amd64" -IUSE="lapack" - -RDEPEND="lapack? ( virtual/lapack )" -DEPEND="${RDEPEND} - virtual/pkgconfig" - -S="${WORKDIR}/${MY_P}" - -src_prepare() { - epatch "${FILESDIR}"/${P}-buildsystem.patch - tc-export CXX PKG_CONFIG -} - -src_compile() { - local myconf - use lapack && myconf="VCFTOOLS_PCA=1" - emake -C cpp ${myconf} -} - -src_install(){ - perl_set_version - dobin cpp/${PN} - insinto ${VENDOR_LIB} - doins perl/*.pm - dobin perl/{fill,vcf}-* - dodoc README.txt -} |