1 files changed, 0 insertions, 57 deletions
diff --git a/sci-biology/mummer/mummer-3.20.ebuild b/sci-biology/mummer/mummer-3.20.ebuild
deleted file mode 100644
index 737e6d6aa644..000000000000
--- a/sci-biology/mummer/mummer-3.20.ebuild
+++ /dev/null
@@ -1,57 +0,0 @@
-# Copyright 1999-2009 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-
-inherit eutils
-
-MY_P="MUMmer${PV}"
-DESCRIPTION="A rapid whole genome aligner"
-HOMEPAGE="http://mummer.sourceforge.net/"
-SRC_URI="mirror://sourceforge/mummer/${MY_P}.tar.gz"
-
-LICENSE="Artistic"
-SLOT="0"
-IUSE="doc"
-KEYWORDS="amd64 x86"
-
-DEPEND=""
-RDEPEND="app-shells/tcsh"
-
-S="${WORKDIR}/${MY_P}"
-
-src_unpack() {
-	unpack ${A}
-	cd "${S}"
-	epatch "${FILESDIR}"/${P}-gcc43.patch
-	# Warning: package uses CPPFLAGS on c in addition to cpp, despite the name
-	sed -i -e 's/CPPFLAGS =/CPPFLAGS = ${CFLAGS} /' \
-		-e 's/LDFLAGS  =$//' "${S}/Makefile"
-}
-
-src_compile() {
-	emake || die "emake failed"
-
-	sed -i -e 's|\($AUX_BIN_DIR = "\).*"|\1/usr/bin"|' \
-		-e 's|\($BIN_DIR = "\).*"|\1/usr/bin"|' \
-		-e 's|\($SCRIPT_DIR = "\).*"|\1/usr/share/'${PN}'/lib"|' \
-		-e 's|\(set bindir = \).*|\1/usr/bin|' \
-		-e 's|\(set scriptdir = \).*|\1/usr/share/'${PN}'/scripts|' \
-		-e 's|\(use lib "\).*"|\1/usr/share/'${PN}'/lib"|' \
-		scripts/* exact-tandems mapview mummerplot nucmer promer run-mummer{1,3} || die "Failed to replace paths"
-	sed -i 's|$bindir/annotate|$bindir/mummer-annotate|' run-mummer1 scripts/run-mummer1.csh
-}
-
-src_install() {
-	dobin nucmer2xfig show-coords mapview show-snps run-mummer{1,3} \
-		exact-tandems promer repeat-match show-aligns gaps mummer \
-		show-tiling mgaps nucmer mummerplot delta-filter combineMUMs aux_bin/* || die
-	newbin annotate mummer-annotate || die
-
-	insinto /usr/share/${PN}/scripts
-	doins scripts/{*.awk,*.csh,*.pl}
-	insinto /usr/share/${PN}/lib
-	doins scripts/Foundation.pm || die
-
-	dodoc ACKNOWLEDGEMENTS ChangeLog README
-	insinto /usr/share/doc/${PF}
-	use doc && doins -r docs
-}