diff options
Diffstat (limited to 'metadata/md5-cache/sci-biology')
106 files changed, 106 insertions, 106 deletions
diff --git a/metadata/md5-cache/sci-biology/HTSeq-2.0.2 b/metadata/md5-cache/sci-biology/HTSeq-2.0.2 index 8bd959852891..2c61e5500dd6 100644 --- a/metadata/md5-cache/sci-biology/HTSeq-2.0.2 +++ b/metadata/md5-cache/sci-biology/HTSeq-2.0.2 @@ -13,5 +13,5 @@ REQUIRED_USE=|| ( python_targets_python3_8 python_targets_python3_9 python_targe RESTRICT=!test? ( test ) !test? ( test ) SLOT=0 SRC_URI=https://github.com/htseq/htseq/archive/release_2.0.2.tar.gz -> HTSeq-2.0.2.gh.tar.gz -_eclasses_=multibuild d26d81f242cb193d899a72bca423d0bd multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 toolchain-funcs 3484f775017f532a8d1ae02c65defe13 multilib 4fbbbc98f236f1b43acd99476bc3cd85 python-utils-r1 667174e2df1036a5520d3b3b3fb33e98 python-r1 e2883e4f04f0503cdf7f2954e2bf5e15 distutils-r1 a012c7f8c0a9dddadb3a4f56364c8f62 flag-o-matic a3abd6002fafb3022597be6b8d01f88b +_eclasses_=multibuild d26d81f242cb193d899a72bca423d0bd multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 toolchain-funcs 1542e649be915f43f6908a9e93909961 multilib 5ca4e49abed8e3a2f7b56920eadee157 python-utils-r1 667174e2df1036a5520d3b3b3fb33e98 python-r1 e2883e4f04f0503cdf7f2954e2bf5e15 distutils-r1 a012c7f8c0a9dddadb3a4f56364c8f62 flag-o-matic 629c5cdf86e3c68e26f2365c54c5d9f5 _md5_=eaf0038e987d5268b687db2978b9cf87 diff --git a/metadata/md5-cache/sci-biology/HTSeq-9999 b/metadata/md5-cache/sci-biology/HTSeq-9999 index c349cebb1606..9f4cf463357f 100644 --- a/metadata/md5-cache/sci-biology/HTSeq-9999 +++ b/metadata/md5-cache/sci-biology/HTSeq-9999 @@ -12,5 +12,5 @@ RDEPEND=dev-python/numpy[python_targets_python3_8(-)?,python_targets_python3_9(- REQUIRED_USE=|| ( python_targets_python3_8 python_targets_python3_9 python_targets_python3_10 ) RESTRICT=!test? ( test ) !test? ( test ) SLOT=0 -_eclasses_=multibuild d26d81f242cb193d899a72bca423d0bd multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 toolchain-funcs 3484f775017f532a8d1ae02c65defe13 multilib 4fbbbc98f236f1b43acd99476bc3cd85 python-utils-r1 667174e2df1036a5520d3b3b3fb33e98 python-r1 e2883e4f04f0503cdf7f2954e2bf5e15 distutils-r1 a012c7f8c0a9dddadb3a4f56364c8f62 flag-o-matic a3abd6002fafb3022597be6b8d01f88b git-r3 b9ac6f96d2a88edb5b351df634dc5e53 +_eclasses_=multibuild d26d81f242cb193d899a72bca423d0bd multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 toolchain-funcs 1542e649be915f43f6908a9e93909961 multilib 5ca4e49abed8e3a2f7b56920eadee157 python-utils-r1 667174e2df1036a5520d3b3b3fb33e98 python-r1 e2883e4f04f0503cdf7f2954e2bf5e15 distutils-r1 a012c7f8c0a9dddadb3a4f56364c8f62 flag-o-matic 629c5cdf86e3c68e26f2365c54c5d9f5 git-r3 b9ac6f96d2a88edb5b351df634dc5e53 _md5_=eaf0038e987d5268b687db2978b9cf87 diff --git a/metadata/md5-cache/sci-biology/STAR-2.7.10a b/metadata/md5-cache/sci-biology/STAR-2.7.10a index 96f0af13edd7..69babd88fc3a 100644 --- a/metadata/md5-cache/sci-biology/STAR-2.7.10a +++ b/metadata/md5-cache/sci-biology/STAR-2.7.10a @@ -10,5 +10,5 @@ LICENSE=GPL-3 RDEPEND=sci-libs/htslib:= SLOT=0 SRC_URI=https://github.com/alexdobin/STAR/archive/2.7.10a.tar.gz -> STAR-2.7.10a.tar.gz -_eclasses_=toolchain-funcs 3484f775017f532a8d1ae02c65defe13 multilib 4fbbbc98f236f1b43acd99476bc3cd85 +_eclasses_=toolchain-funcs 1542e649be915f43f6908a9e93909961 multilib 5ca4e49abed8e3a2f7b56920eadee157 _md5_=521aed057c81cfa841ab4b2dcf63e65b diff --git a/metadata/md5-cache/sci-biology/abyss-2.3.4 b/metadata/md5-cache/sci-biology/abyss-2.3.4 index 4a500286fc6c..f128b3636b79 100644 --- a/metadata/md5-cache/sci-biology/abyss-2.3.4 +++ b/metadata/md5-cache/sci-biology/abyss-2.3.4 @@ -11,5 +11,5 @@ LICENSE=GPL-3 RDEPEND=dev-cpp/sparsehash dev-libs/boost:= misc-haskell? ( dev-libs/gmp:0= dev-libs/libffi:0= ) sys-cluster/openmpi dev-db/sqlite:3 SLOT=0 SRC_URI=https://github.com/bcgsc/abyss/archive/2.3.4.tar.gz -> abyss-2.3.4.tar.gz -_eclasses_=gnuconfig b6b3e92f8b8c996400074b5f61a59256 toolchain-funcs 3484f775017f532a8d1ae02c65defe13 multilib 4fbbbc98f236f1b43acd99476bc3cd85 libtool 241a8f577b9781a42a7421e53448a44e autotools 2fd69a56a527d12409ba43c733b7ac8f +_eclasses_=gnuconfig b6b3e92f8b8c996400074b5f61a59256 toolchain-funcs 1542e649be915f43f6908a9e93909961 multilib 5ca4e49abed8e3a2f7b56920eadee157 libtool 241a8f577b9781a42a7421e53448a44e autotools 9e6965bfaa00f52cc61e0d4bc44c87b3 _md5_=9a708eff89b221551fbb0bcc299ccfa3 diff --git a/metadata/md5-cache/sci-biology/amap-2.2-r5 b/metadata/md5-cache/sci-biology/amap-2.2-r5 index 8beffd6c4e74..412e39d86148 100644 --- a/metadata/md5-cache/sci-biology/amap-2.2-r5 +++ b/metadata/md5-cache/sci-biology/amap-2.2-r5 @@ -11,5 +11,5 @@ LICENSE=GPL-2 RDEPEND=java? ( >=virtual/jre-1.8:* ) java? ( >=dev-java/java-config-2.2.0-r3 ) SLOT=0 SRC_URI=http://baboon.math.berkeley.edu/amap/download/amap.2.2.tar.gz -_eclasses_=java-utils-2 c79d65661a9f4f72b60376c9e4b3dfa1 java-pkg-opt-2 a71433e535af8faae0c0f6c861a32054 multilib 4fbbbc98f236f1b43acd99476bc3cd85 toolchain-funcs 3484f775017f532a8d1ae02c65defe13 java-ant-2 5cf479aa9e0ac9cc55899f2762c2aaa0 +_eclasses_=java-utils-2 c79d65661a9f4f72b60376c9e4b3dfa1 java-pkg-opt-2 a71433e535af8faae0c0f6c861a32054 multilib 5ca4e49abed8e3a2f7b56920eadee157 toolchain-funcs 1542e649be915f43f6908a9e93909961 java-ant-2 5cf479aa9e0ac9cc55899f2762c2aaa0 _md5_=b4e132581d5e91612a875f7f94387a1b diff --git a/metadata/md5-cache/sci-biology/augustus-2.5.5 b/metadata/md5-cache/sci-biology/augustus-2.5.5 index e1452b34034d..f10305e7932e 100644 --- a/metadata/md5-cache/sci-biology/augustus-2.5.5 +++ b/metadata/md5-cache/sci-biology/augustus-2.5.5 @@ -8,5 +8,5 @@ KEYWORDS=amd64 x86 LICENSE=Artistic SLOT=0 SRC_URI=http://augustus.gobics.de/binaries/augustus.2.5.5.tar.gz -_eclasses_=toolchain-funcs 3484f775017f532a8d1ae02c65defe13 multilib 4fbbbc98f236f1b43acd99476bc3cd85 +_eclasses_=toolchain-funcs 1542e649be915f43f6908a9e93909961 multilib 5ca4e49abed8e3a2f7b56920eadee157 _md5_=80962b244c7531e320f35904727b5bd5 diff --git a/metadata/md5-cache/sci-biology/bamtools-2.5.2 b/metadata/md5-cache/sci-biology/bamtools-2.5.2 index 76c37f63ec65..586bf124055a 100644 --- a/metadata/md5-cache/sci-biology/bamtools-2.5.2 +++ b/metadata/md5-cache/sci-biology/bamtools-2.5.2 @@ -10,5 +10,5 @@ LICENSE=MIT RDEPEND=>=dev-libs/jsoncpp-1.8.0:= sys-libs/zlib:= SLOT=0/2.5.2 SRC_URI=https://github.com/pezmaster31/bamtools/archive/v2.5.2.tar.gz -> bamtools-2.5.2.tar.gz -_eclasses_=toolchain-funcs 3484f775017f532a8d1ae02c65defe13 multilib 4fbbbc98f236f1b43acd99476bc3cd85 edos2unix 33e347e171066657f91f8b0c72ec8773 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 wrapper 4a1902f969e5718126434fc35f3a0d9c eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic a3abd6002fafb3022597be6b8d01f88b multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 58ec4e54962bf45d065fb95030701514 xdg-utils fffb53a53cf17c9c0c998a3c0a590c7e cmake 44afbf15c35884f7c840470f1cf05d0d +_eclasses_=toolchain-funcs 1542e649be915f43f6908a9e93909961 multilib 5ca4e49abed8e3a2f7b56920eadee157 edos2unix 33e347e171066657f91f8b0c72ec8773 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 wrapper 4a1902f969e5718126434fc35f3a0d9c eutils 23cb2d46c80c12aa8b25973b4cdcb257 flag-o-matic 629c5cdf86e3c68e26f2365c54c5d9f5 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 58ec4e54962bf45d065fb95030701514 xdg-utils fffb53a53cf17c9c0c998a3c0a590c7e cmake 44afbf15c35884f7c840470f1cf05d0d _md5_=efdfbdbf4181a018ee9965d5c16be71f diff --git a/metadata/md5-cache/sci-biology/bamtools-9999 b/metadata/md5-cache/sci-biology/bamtools-9999 index 2d8cd2cb7469..513415abd609 100644 --- a/metadata/md5-cache/sci-biology/bamtools-9999 +++ b/metadata/md5-cache/sci-biology/bamtools-9999 @@ -9,5 +9,5 @@ LICENSE=MIT PROPERTIES=live RDEPEND=>=dev-libs/jsoncpp-1.8.0:= sys-libs/zlib:= SLOT=0/9999 -_eclasses_=toolchain-funcs 3484f775017f532a8d1ae02c65defe13 multilib 4fbbbc98f236f1b43acd99476bc3cd85 edos2unix 33e347e171066657f91f8b0c72ec8773 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 wrapper 4a1902f969e5718126434fc35f3a0d9c eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic a3abd6002fafb3022597be6b8d01f88b multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 58ec4e54962bf45d065fb95030701514 xdg-utils fffb53a53cf17c9c0c998a3c0a590c7e cmake 44afbf15c35884f7c840470f1cf05d0d git-r3 b9ac6f96d2a88edb5b351df634dc5e53 +_eclasses_=toolchain-funcs 1542e649be915f43f6908a9e93909961 multilib 5ca4e49abed8e3a2f7b56920eadee157 edos2unix 33e347e171066657f91f8b0c72ec8773 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 wrapper 4a1902f969e5718126434fc35f3a0d9c eutils 23cb2d46c80c12aa8b25973b4cdcb257 flag-o-matic 629c5cdf86e3c68e26f2365c54c5d9f5 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 58ec4e54962bf45d065fb95030701514 xdg-utils fffb53a53cf17c9c0c998a3c0a590c7e cmake 44afbf15c35884f7c840470f1cf05d0d git-r3 b9ac6f96d2a88edb5b351df634dc5e53 _md5_=a2299dc6ca850c1c25582656d7586681 diff --git a/metadata/md5-cache/sci-biology/bcftools-1.15.1 b/metadata/md5-cache/sci-biology/bcftools-1.15.1 index 8fb0c1966424..b5b776ef42a3 100644 --- a/metadata/md5-cache/sci-biology/bcftools-1.15.1 +++ b/metadata/md5-cache/sci-biology/bcftools-1.15.1 @@ -12,5 +12,5 @@ RDEPEND=dev-lang/perl python_single_target_python3_8? ( dev-python/matplotlib[py REQUIRED_USE=^^ ( python_single_target_python3_8 python_single_target_python3_9 python_single_target_python3_10 ) SLOT=0 SRC_URI=https://github.com/samtools/bcftools/releases/download/1.15.1/bcftools-1.15.1.tar.bz2 -_eclasses_=multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 toolchain-funcs 3484f775017f532a8d1ae02c65defe13 multilib 4fbbbc98f236f1b43acd99476bc3cd85 python-utils-r1 667174e2df1036a5520d3b3b3fb33e98 python-single-r1 a5747fe6dc0651d95cb78eddd5e160a8 +_eclasses_=multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 toolchain-funcs 1542e649be915f43f6908a9e93909961 multilib 5ca4e49abed8e3a2f7b56920eadee157 python-utils-r1 667174e2df1036a5520d3b3b3fb33e98 python-single-r1 a5747fe6dc0651d95cb78eddd5e160a8 _md5_=a991b200539f7c26af7f584fe62e90f5 diff --git a/metadata/md5-cache/sci-biology/bedtools-2.30.0 b/metadata/md5-cache/sci-biology/bedtools-2.30.0 index 488eed692356..59d727064d9b 100644 --- a/metadata/md5-cache/sci-biology/bedtools-2.30.0 +++ b/metadata/md5-cache/sci-biology/bedtools-2.30.0 @@ -12,5 +12,5 @@ RDEPEND=app-arch/bzip2 app-arch/xz-utils sys-libs/zlib RESTRICT=!test? ( test ) SLOT=0 SRC_URI=https://github.com/arq5x/bedtools2/releases/download/v2.30.0/bedtools-2.30.0.tar.gz -_eclasses_=multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 toolchain-funcs 3484f775017f532a8d1ae02c65defe13 multilib 4fbbbc98f236f1b43acd99476bc3cd85 python-utils-r1 667174e2df1036a5520d3b3b3fb33e98 python-any-r1 a3e9c0524a795d7f2767a2cf12a2e8c0 +_eclasses_=multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 toolchain-funcs 1542e649be915f43f6908a9e93909961 multilib 5ca4e49abed8e3a2f7b56920eadee157 python-utils-r1 667174e2df1036a5520d3b3b3fb33e98 python-any-r1 a3e9c0524a795d7f2767a2cf12a2e8c0 _md5_=5f18ddd41275559b1783fee4a2405f1f diff --git a/metadata/md5-cache/sci-biology/bfast-0.7.0a b/metadata/md5-cache/sci-biology/bfast-0.7.0a index 0334183ae7f5..fce013de8c70 100644 --- a/metadata/md5-cache/sci-biology/bfast-0.7.0a +++ b/metadata/md5-cache/sci-biology/bfast-0.7.0a @@ -11,5 +11,5 @@ RDEPEND=dev-perl/XML-Simple RESTRICT=test SLOT=0 SRC_URI=mirror://sourceforge/bfast/bfast-0.7.0a.tar.gz -_eclasses_=gnuconfig b6b3e92f8b8c996400074b5f61a59256 toolchain-funcs 3484f775017f532a8d1ae02c65defe13 multilib 4fbbbc98f236f1b43acd99476bc3cd85 libtool 241a8f577b9781a42a7421e53448a44e autotools 2fd69a56a527d12409ba43c733b7ac8f +_eclasses_=gnuconfig b6b3e92f8b8c996400074b5f61a59256 toolchain-funcs 1542e649be915f43f6908a9e93909961 multilib 5ca4e49abed8e3a2f7b56920eadee157 libtool 241a8f577b9781a42a7421e53448a44e autotools 9e6965bfaa00f52cc61e0d4bc44c87b3 _md5_=e64abecddb86e9860edc80410f299d83 diff --git a/metadata/md5-cache/sci-biology/biogrep-1.0-r3 b/metadata/md5-cache/sci-biology/biogrep-1.0-r3 index 47644ed11d19..7e48b503a85a 100644 --- a/metadata/md5-cache/sci-biology/biogrep-1.0-r3 +++ b/metadata/md5-cache/sci-biology/biogrep-1.0-r3 @@ -9,5 +9,5 @@ KEYWORDS=~amd64 ~x86 LICENSE=GPL-2 SLOT=0 SRC_URI=http://www.openwetware.org/images/3/3d/Biogrep-1.0.tar.gz -> biogrep-1.0.tar.gz doc? ( http://www.openwetware.org/images/4/49/Biogrep.pdf -> biogrep-1.0.pdf ) -_eclasses_=gnuconfig b6b3e92f8b8c996400074b5f61a59256 toolchain-funcs 3484f775017f532a8d1ae02c65defe13 multilib 4fbbbc98f236f1b43acd99476bc3cd85 libtool 241a8f577b9781a42a7421e53448a44e autotools 2fd69a56a527d12409ba43c733b7ac8f +_eclasses_=gnuconfig b6b3e92f8b8c996400074b5f61a59256 toolchain-funcs 1542e649be915f43f6908a9e93909961 multilib 5ca4e49abed8e3a2f7b56920eadee157 libtool 241a8f577b9781a42a7421e53448a44e autotools 9e6965bfaa00f52cc61e0d4bc44c87b3 _md5_=18fc653ace8feaf53e4d1c1818b7b00c diff --git a/metadata/md5-cache/sci-biology/biopandas-0.2.7 b/metadata/md5-cache/sci-biology/biopandas-0.2.7 index 3e2cd7ea647f..18641acbdb14 100644 --- a/metadata/md5-cache/sci-biology/biopandas-0.2.7 +++ b/metadata/md5-cache/sci-biology/biopandas-0.2.7 @@ -12,5 +12,5 @@ REQUIRED_USE=|| ( python_targets_python3_8 python_targets_python3_9 python_targe RESTRICT=!test? ( test ) !test? ( test ) SLOT=0 SRC_URI=mirror://pypi/B/BioPandas/biopandas-0.2.7.tar.gz -_eclasses_=multibuild d26d81f242cb193d899a72bca423d0bd multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 toolchain-funcs 3484f775017f532a8d1ae02c65defe13 multilib 4fbbbc98f236f1b43acd99476bc3cd85 python-utils-r1 667174e2df1036a5520d3b3b3fb33e98 python-r1 e2883e4f04f0503cdf7f2954e2bf5e15 distutils-r1 a012c7f8c0a9dddadb3a4f56364c8f62 +_eclasses_=multibuild d26d81f242cb193d899a72bca423d0bd multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 toolchain-funcs 1542e649be915f43f6908a9e93909961 multilib 5ca4e49abed8e3a2f7b56920eadee157 python-utils-r1 667174e2df1036a5520d3b3b3fb33e98 python-r1 e2883e4f04f0503cdf7f2954e2bf5e15 distutils-r1 a012c7f8c0a9dddadb3a4f56364c8f62 _md5_=493935812e002415b6fce30c9e9dc8f8 diff --git a/metadata/md5-cache/sci-biology/biopython-1.79 b/metadata/md5-cache/sci-biology/biopython-1.79 index fa9e80a6cc75..b1cb1c8690b4 100644 --- a/metadata/md5-cache/sci-biology/biopython-1.79 +++ b/metadata/md5-cache/sci-biology/biopython-1.79 @@ -12,5 +12,5 @@ RDEPEND=dev-python/matplotlib[python_targets_python3_8(-)?,python_targets_python REQUIRED_USE=|| ( python_targets_python3_8 python_targets_python3_9 python_targets_python3_10 ) SLOT=0 SRC_URI=mirror://pypi/b/biopython/biopython-1.79.tar.gz -_eclasses_=multibuild d26d81f242cb193d899a72bca423d0bd multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 toolchain-funcs 3484f775017f532a8d1ae02c65defe13 multilib 4fbbbc98f236f1b43acd99476bc3cd85 python-utils-r1 667174e2df1036a5520d3b3b3fb33e98 python-r1 e2883e4f04f0503cdf7f2954e2bf5e15 distutils-r1 a012c7f8c0a9dddadb3a4f56364c8f62 optfeature 1a2157392a869265b2afcb63a26c12ac +_eclasses_=multibuild d26d81f242cb193d899a72bca423d0bd multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 toolchain-funcs 1542e649be915f43f6908a9e93909961 multilib 5ca4e49abed8e3a2f7b56920eadee157 python-utils-r1 667174e2df1036a5520d3b3b3fb33e98 python-r1 e2883e4f04f0503cdf7f2954e2bf5e15 distutils-r1 a012c7f8c0a9dddadb3a4f56364c8f62 optfeature 1a2157392a869265b2afcb63a26c12ac _md5_=89d2124a2c9f76eda9c399f23c96a8b8 diff --git a/metadata/md5-cache/sci-biology/blat-34-r3 b/metadata/md5-cache/sci-biology/blat-34-r3 index 6961b6e5ae64..12c0fcb6bfd1 100644 --- a/metadata/md5-cache/sci-biology/blat-34-r3 +++ b/metadata/md5-cache/sci-biology/blat-34-r3 @@ -8,5 +8,5 @@ KEYWORDS=~amd64 ~x86 LICENSE=blat SLOT=0 SRC_URI=http://www.soe.ucsc.edu/~kent/src/blatSrc34.zip -_eclasses_=toolchain-funcs 3484f775017f532a8d1ae02c65defe13 multilib 4fbbbc98f236f1b43acd99476bc3cd85 +_eclasses_=toolchain-funcs 1542e649be915f43f6908a9e93909961 multilib 5ca4e49abed8e3a2f7b56920eadee157 _md5_=5de19b6facdbdd7214fad082a7d27f77 diff --git a/metadata/md5-cache/sci-biology/bowtie-2.4.4 b/metadata/md5-cache/sci-biology/bowtie-2.4.4 index 93fad0524d03..108ffa340b17 100644 --- a/metadata/md5-cache/sci-biology/bowtie-2.4.4 +++ b/metadata/md5-cache/sci-biology/bowtie-2.4.4 @@ -12,5 +12,5 @@ RDEPEND=python_single_target_python3_8? ( >=dev-lang/python-3.8.13:3.8 ) python_ REQUIRED_USE=cpu_flags_x86_sse2 ^^ ( python_single_target_python3_8 python_single_target_python3_9 python_single_target_python3_10 ) SLOT=2 SRC_URI=mirror://sourceforge/project/bowtie-bio/bowtie2/2.4.4/bowtie2-2.4.4-source.zip -_eclasses_=multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 toolchain-funcs 3484f775017f532a8d1ae02c65defe13 multilib 4fbbbc98f236f1b43acd99476bc3cd85 python-utils-r1 667174e2df1036a5520d3b3b3fb33e98 python-single-r1 a5747fe6dc0651d95cb78eddd5e160a8 +_eclasses_=multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 toolchain-funcs 1542e649be915f43f6908a9e93909961 multilib 5ca4e49abed8e3a2f7b56920eadee157 python-utils-r1 667174e2df1036a5520d3b3b3fb33e98 python-single-r1 a5747fe6dc0651d95cb78eddd5e160a8 _md5_=a169406c93e64d9cae6cbb8ad262f62b diff --git a/metadata/md5-cache/sci-biology/bwa-0.7.17 b/metadata/md5-cache/sci-biology/bwa-0.7.17 index 684b34894cee..da458d3f82da 100644 --- a/metadata/md5-cache/sci-biology/bwa-0.7.17 +++ b/metadata/md5-cache/sci-biology/bwa-0.7.17 @@ -9,5 +9,5 @@ LICENSE=GPL-3 RDEPEND=sys-libs/zlib dev-lang/perl SLOT=0 SRC_URI=https://github.com/lh3/bwa/archive/v0.7.17.tar.gz -> bwa-0.7.17.tar.gz -_eclasses_=toolchain-funcs 3484f775017f532a8d1ae02c65defe13 multilib 4fbbbc98f236f1b43acd99476bc3cd85 +_eclasses_=toolchain-funcs 1542e649be915f43f6908a9e93909961 multilib 5ca4e49abed8e3a2f7b56920eadee157 _md5_=620c3569e8293303737f7844385c7e82 diff --git a/metadata/md5-cache/sci-biology/cd-hit-4.6.6-r1 b/metadata/md5-cache/sci-biology/cd-hit-4.6.6-r1 index 04ed26632953..3586f18870ff 100644 --- a/metadata/md5-cache/sci-biology/cd-hit-4.6.6-r1 +++ b/metadata/md5-cache/sci-biology/cd-hit-4.6.6-r1 @@ -9,5 +9,5 @@ LICENSE=GPL-2 RDEPEND=dev-lang/perl SLOT=0 SRC_URI=https://github.com/weizhongli/cdhit/releases/download/V4.6.6/cd-hit-v4.6.6-2016-0711.tar.gz -> cd-hit-4.6.6.tar.gz -_eclasses_=toolchain-funcs 3484f775017f532a8d1ae02c65defe13 multilib 4fbbbc98f236f1b43acd99476bc3cd85 +_eclasses_=toolchain-funcs 1542e649be915f43f6908a9e93909961 multilib 5ca4e49abed8e3a2f7b56920eadee157 _md5_=72c254d2d4b43c49ff9b0ddcde699acb diff --git a/metadata/md5-cache/sci-biology/clustal-omega-1.2.4-r1 b/metadata/md5-cache/sci-biology/clustal-omega-1.2.4-r1 index 311fc77c1a43..2b021e34d7a5 100644 --- a/metadata/md5-cache/sci-biology/clustal-omega-1.2.4-r1 +++ b/metadata/md5-cache/sci-biology/clustal-omega-1.2.4-r1 @@ -10,5 +10,5 @@ LICENSE=GPL-2 RDEPEND=dev-libs/argtable SLOT=0 SRC_URI=http://www.clustal.org/omega/clustal-omega-1.2.4.tar.gz -_eclasses_=gnuconfig b6b3e92f8b8c996400074b5f61a59256 toolchain-funcs 3484f775017f532a8d1ae02c65defe13 multilib 4fbbbc98f236f1b43acd99476bc3cd85 libtool 241a8f577b9781a42a7421e53448a44e autotools 2fd69a56a527d12409ba43c733b7ac8f +_eclasses_=gnuconfig b6b3e92f8b8c996400074b5f61a59256 toolchain-funcs 1542e649be915f43f6908a9e93909961 multilib 5ca4e49abed8e3a2f7b56920eadee157 libtool 241a8f577b9781a42a7421e53448a44e autotools 9e6965bfaa00f52cc61e0d4bc44c87b3 _md5_=1fe31c7bf68a0e3d5cd862d476a40e5b diff --git a/metadata/md5-cache/sci-biology/clustalw-1.83-r4 b/metadata/md5-cache/sci-biology/clustalw-1.83-r4 index 446dd5140165..de8b476fbc42 100644 --- a/metadata/md5-cache/sci-biology/clustalw-1.83-r4 +++ b/metadata/md5-cache/sci-biology/clustalw-1.83-r4 @@ -7,5 +7,5 @@ KEYWORDS=amd64 ~ppc ppc64 sparc x86 ~amd64-linux ~x86-linux ~ppc-macos ~sparc-so LICENSE=clustalw SLOT=1 SRC_URI=ftp://ftp.ebi.ac.uk/pub/software/unix/clustalw/clustalw1.83.UNIX.tar.gz -_eclasses_=toolchain-funcs 3484f775017f532a8d1ae02c65defe13 multilib 4fbbbc98f236f1b43acd99476bc3cd85 +_eclasses_=toolchain-funcs 1542e649be915f43f6908a9e93909961 multilib 5ca4e49abed8e3a2f7b56920eadee157 _md5_=ddae5c7662955525ce9e2a946d0d953c diff --git a/metadata/md5-cache/sci-biology/clustalw-mpi-0.13-r3 b/metadata/md5-cache/sci-biology/clustalw-mpi-0.13-r3 index 09b58e3f6575..8ac56f28b156 100644 --- a/metadata/md5-cache/sci-biology/clustalw-mpi-0.13-r3 +++ b/metadata/md5-cache/sci-biology/clustalw-mpi-0.13-r3 @@ -10,5 +10,5 @@ LICENSE=public-domain RDEPEND=virtual/mpi SLOT=0 SRC_URI=http://web.bii.a-star.edu.sg/~kuobin/clustalw-mpi/clustalw-mpi-0.13.tar.gz -_eclasses_=toolchain-funcs 3484f775017f532a8d1ae02c65defe13 multilib 4fbbbc98f236f1b43acd99476bc3cd85 +_eclasses_=toolchain-funcs 1542e649be915f43f6908a9e93909961 multilib 5ca4e49abed8e3a2f7b56920eadee157 _md5_=689841db0e3b7d6629b51049a2942165 diff --git a/metadata/md5-cache/sci-biology/clustalx-2.1-r3 b/metadata/md5-cache/sci-biology/clustalx-2.1-r3 index e6f5a1feb33c..58243976ac7b 100644 --- a/metadata/md5-cache/sci-biology/clustalx-2.1-r3 +++ b/metadata/md5-cache/sci-biology/clustalx-2.1-r3 @@ -9,5 +9,5 @@ LICENSE=GPL-3 LGPL-3 RDEPEND=dev-qt/qtcore:5 dev-qt/qtgui:5 dev-qt/qtwidgets:5 dev-qt/qtxml:5 >=sci-biology/clustalw-2.1 SLOT=0 SRC_URI=http://www.clustal.org/download/current/clustalx-2.1.tar.gz https://dev.gentoo.org/~jlec/distfiles/clustalx.png.xz -_eclasses_=desktop 22952d8f27cac191d75529d4c38e6bfa toolchain-funcs 3484f775017f532a8d1ae02c65defe13 multilib 4fbbbc98f236f1b43acd99476bc3cd85 qmake-utils 59420c906278d16deaaa629f9d115707 +_eclasses_=desktop 22952d8f27cac191d75529d4c38e6bfa toolchain-funcs 1542e649be915f43f6908a9e93909961 multilib 5ca4e49abed8e3a2f7b56920eadee157 qmake-utils 59420c906278d16deaaa629f9d115707 _md5_=3f60f1952758458fc3cd4e2789a942f5 diff --git a/metadata/md5-cache/sci-biology/consed-29 b/metadata/md5-cache/sci-biology/consed-29 index ce212503c3b1..1e5bf84606ec 100644 --- a/metadata/md5-cache/sci-biology/consed-29 +++ b/metadata/md5-cache/sci-biology/consed-29 @@ -11,5 +11,5 @@ RDEPEND=x11-libs/libX11 x11-libs/motif:0 sci-biology/samtools:0.1-legacy dev-lan RESTRICT=fetch SLOT=0 SRC_URI=consed-29-sources.tar.gz consed-29-linux.tar.gz -_eclasses_=toolchain-funcs 3484f775017f532a8d1ae02c65defe13 multilib 4fbbbc98f236f1b43acd99476bc3cd85 desktop 22952d8f27cac191d75529d4c38e6bfa edos2unix 33e347e171066657f91f8b0c72ec8773 estack 055c42df72f76a4f45ec92b35e83cd56 epatch 6af347b3c27477b48efaaa1261a0dd69 ltprune 97143780d341cc8d8f1d4c6187a36d29 preserve-libs a8e50acee31b5759b4df1f7707cae54b strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 vcs-clean d271b7bc7e6a009758d7d4ef749174e3 wrapper 4a1902f969e5718126434fc35f3a0d9c eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic a3abd6002fafb3022597be6b8d01f88b +_eclasses_=toolchain-funcs 1542e649be915f43f6908a9e93909961 multilib 5ca4e49abed8e3a2f7b56920eadee157 desktop 22952d8f27cac191d75529d4c38e6bfa edos2unix 33e347e171066657f91f8b0c72ec8773 estack 055c42df72f76a4f45ec92b35e83cd56 epatch 447396341f5f896d722e435a06f87a4f ltprune 97143780d341cc8d8f1d4c6187a36d29 preserve-libs a8e50acee31b5759b4df1f7707cae54b strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 vcs-clean d271b7bc7e6a009758d7d4ef749174e3 wrapper 4a1902f969e5718126434fc35f3a0d9c eutils 23cb2d46c80c12aa8b25973b4cdcb257 flag-o-matic 629c5cdf86e3c68e26f2365c54c5d9f5 _md5_=1e30f1827727dab34c75c8c026745369 diff --git a/metadata/md5-cache/sci-biology/dialign-tx-1.0.2-r2 b/metadata/md5-cache/sci-biology/dialign-tx-1.0.2-r2 index d312f617f48f..777b71da8c33 100644 --- a/metadata/md5-cache/sci-biology/dialign-tx-1.0.2-r2 +++ b/metadata/md5-cache/sci-biology/dialign-tx-1.0.2-r2 @@ -7,5 +7,5 @@ KEYWORDS=~amd64 ~x86 LICENSE=LGPL-2.1 SLOT=0 SRC_URI=http://dialign-tx.gobics.de/DIALIGN-TX_1.0.2.tar.gz -_eclasses_=toolchain-funcs 3484f775017f532a8d1ae02c65defe13 multilib 4fbbbc98f236f1b43acd99476bc3cd85 +_eclasses_=toolchain-funcs 1542e649be915f43f6908a9e93909961 multilib 5ca4e49abed8e3a2f7b56920eadee157 _md5_=b2a78c4cfa60eb348ae63d076ecb5fba diff --git a/metadata/md5-cache/sci-biology/dialign2-2.2.1-r1 b/metadata/md5-cache/sci-biology/dialign2-2.2.1-r1 index 46aa413f1867..5cb2b93ba236 100644 --- a/metadata/md5-cache/sci-biology/dialign2-2.2.1-r1 +++ b/metadata/md5-cache/sci-biology/dialign2-2.2.1-r1 @@ -7,5 +7,5 @@ KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux LICENSE=LGPL-2.1 SLOT=0 SRC_URI=http://bibiserv.techfak.uni-bielefeld.de/applications/dialign/resources/downloads/dialign-2.2.1-src.tar.gz -_eclasses_=toolchain-funcs 3484f775017f532a8d1ae02c65defe13 multilib 4fbbbc98f236f1b43acd99476bc3cd85 +_eclasses_=toolchain-funcs 1542e649be915f43f6908a9e93909961 multilib 5ca4e49abed8e3a2f7b56920eadee157 _md5_=879353dc71e4dca1cd8026068a0c808c diff --git a/metadata/md5-cache/sci-biology/elph-1.0.1-r2 b/metadata/md5-cache/sci-biology/elph-1.0.1-r2 index 804e3c052da0..65423ba77e49 100644 --- a/metadata/md5-cache/sci-biology/elph-1.0.1-r2 +++ b/metadata/md5-cache/sci-biology/elph-1.0.1-r2 @@ -7,5 +7,5 @@ KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux ~ppc-macos LICENSE=Artistic SLOT=0 SRC_URI=ftp://ftp.cbcb.umd.edu/pub/software/elph/ELPH-1.0.1.tar.gz -_eclasses_=toolchain-funcs 3484f775017f532a8d1ae02c65defe13 multilib 4fbbbc98f236f1b43acd99476bc3cd85 +_eclasses_=toolchain-funcs 1542e649be915f43f6908a9e93909961 multilib 5ca4e49abed8e3a2f7b56920eadee157 _md5_=12ec147b7c0b74b6a61b6fb56542afb5 diff --git a/metadata/md5-cache/sci-biology/embassy-cbstools-1.0.0.660-r1 b/metadata/md5-cache/sci-biology/embassy-cbstools-1.0.0.660-r1 index 52fb3d344057..f557bf663990 100644 --- a/metadata/md5-cache/sci-biology/embassy-cbstools-1.0.0.660-r1 +++ b/metadata/md5-cache/sci-biology/embassy-cbstools-1.0.0.660-r1 @@ -11,5 +11,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/CBSTOOLS-1.0.0.660.tar.gz -> embassy-cbstools-1.0.0.660.tar.gz -_eclasses_=gnuconfig b6b3e92f8b8c996400074b5f61a59256 toolchain-funcs 3484f775017f532a8d1ae02c65defe13 multilib 4fbbbc98f236f1b43acd99476bc3cd85 libtool 241a8f577b9781a42a7421e53448a44e autotools 2fd69a56a527d12409ba43c733b7ac8f flag-o-matic a3abd6002fafb3022597be6b8d01f88b emboss-r3 ed4c0b270092039c992b771a26ca322a +_eclasses_=gnuconfig b6b3e92f8b8c996400074b5f61a59256 toolchain-funcs 1542e649be915f43f6908a9e93909961 multilib 5ca4e49abed8e3a2f7b56920eadee157 libtool 241a8f577b9781a42a7421e53448a44e autotools 9e6965bfaa00f52cc61e0d4bc44c87b3 flag-o-matic 629c5cdf86e3c68e26f2365c54c5d9f5 emboss-r3 ed4c0b270092039c992b771a26ca322a _md5_=56469e1c3bb7c4baac8ad99638b59ff0 diff --git a/metadata/md5-cache/sci-biology/embassy-clustalomega-1.1.0.660-r1 b/metadata/md5-cache/sci-biology/embassy-clustalomega-1.1.0.660-r1 index 2185a5ecd74b..2e135fdc292f 100644 --- a/metadata/md5-cache/sci-biology/embassy-clustalomega-1.1.0.660-r1 +++ b/metadata/md5-cache/sci-biology/embassy-clustalomega-1.1.0.660-r1 @@ -11,5 +11,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=sci-biology/clustal-omega dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/CLUSTALOMEGA-1.1.0.660.tar.gz -> embassy-clustalomega-1.1.0.660.tar.gz -_eclasses_=gnuconfig b6b3e92f8b8c996400074b5f61a59256 toolchain-funcs 3484f775017f532a8d1ae02c65defe13 multilib 4fbbbc98f236f1b43acd99476bc3cd85 libtool 241a8f577b9781a42a7421e53448a44e autotools 2fd69a56a527d12409ba43c733b7ac8f flag-o-matic a3abd6002fafb3022597be6b8d01f88b emboss-r3 ed4c0b270092039c992b771a26ca322a +_eclasses_=gnuconfig b6b3e92f8b8c996400074b5f61a59256 toolchain-funcs 1542e649be915f43f6908a9e93909961 multilib 5ca4e49abed8e3a2f7b56920eadee157 libtool 241a8f577b9781a42a7421e53448a44e autotools 9e6965bfaa00f52cc61e0d4bc44c87b3 flag-o-matic 629c5cdf86e3c68e26f2365c54c5d9f5 emboss-r3 ed4c0b270092039c992b771a26ca322a _md5_=864a13621791118f794da4601dcde749 diff --git a/metadata/md5-cache/sci-biology/embassy-domainatrix-0.1.660-r1 b/metadata/md5-cache/sci-biology/embassy-domainatrix-0.1.660-r1 index 8a3573221dd7..8907d3e4ca57 100644 --- a/metadata/md5-cache/sci-biology/embassy-domainatrix-0.1.660-r1 +++ b/metadata/md5-cache/sci-biology/embassy-domainatrix-0.1.660-r1 @@ -11,5 +11,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/DOMAINATRIX-0.1.660.tar.gz -> embassy-domainatrix-0.1.660.tar.gz -_eclasses_=gnuconfig b6b3e92f8b8c996400074b5f61a59256 toolchain-funcs 3484f775017f532a8d1ae02c65defe13 multilib 4fbbbc98f236f1b43acd99476bc3cd85 libtool 241a8f577b9781a42a7421e53448a44e autotools 2fd69a56a527d12409ba43c733b7ac8f flag-o-matic a3abd6002fafb3022597be6b8d01f88b emboss-r3 ed4c0b270092039c992b771a26ca322a +_eclasses_=gnuconfig b6b3e92f8b8c996400074b5f61a59256 toolchain-funcs 1542e649be915f43f6908a9e93909961 multilib 5ca4e49abed8e3a2f7b56920eadee157 libtool 241a8f577b9781a42a7421e53448a44e autotools 9e6965bfaa00f52cc61e0d4bc44c87b3 flag-o-matic 629c5cdf86e3c68e26f2365c54c5d9f5 emboss-r3 ed4c0b270092039c992b771a26ca322a _md5_=af29c98cab7134ba05c6d874e37d95dc diff --git a/metadata/md5-cache/sci-biology/embassy-domalign-0.1.660-r1 b/metadata/md5-cache/sci-biology/embassy-domalign-0.1.660-r1 index 375ccd4017f9..906819c8768a 100644 --- a/metadata/md5-cache/sci-biology/embassy-domalign-0.1.660-r1 +++ b/metadata/md5-cache/sci-biology/embassy-domalign-0.1.660-r1 @@ -11,5 +11,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/DOMALIGN-0.1.660.tar.gz -> embassy-domalign-0.1.660.tar.gz -_eclasses_=gnuconfig b6b3e92f8b8c996400074b5f61a59256 toolchain-funcs 3484f775017f532a8d1ae02c65defe13 multilib 4fbbbc98f236f1b43acd99476bc3cd85 libtool 241a8f577b9781a42a7421e53448a44e autotools 2fd69a56a527d12409ba43c733b7ac8f flag-o-matic a3abd6002fafb3022597be6b8d01f88b emboss-r3 ed4c0b270092039c992b771a26ca322a +_eclasses_=gnuconfig b6b3e92f8b8c996400074b5f61a59256 toolchain-funcs 1542e649be915f43f6908a9e93909961 multilib 5ca4e49abed8e3a2f7b56920eadee157 libtool 241a8f577b9781a42a7421e53448a44e autotools 9e6965bfaa00f52cc61e0d4bc44c87b3 flag-o-matic 629c5cdf86e3c68e26f2365c54c5d9f5 emboss-r3 ed4c0b270092039c992b771a26ca322a _md5_=677a5e171c80e94969c1ab9c0b55e283 diff --git a/metadata/md5-cache/sci-biology/embassy-domsearch-0.1.660-r1 b/metadata/md5-cache/sci-biology/embassy-domsearch-0.1.660-r1 index 370ed2a60888..b4bf84995bda 100644 --- a/metadata/md5-cache/sci-biology/embassy-domsearch-0.1.660-r1 +++ b/metadata/md5-cache/sci-biology/embassy-domsearch-0.1.660-r1 @@ -11,5 +11,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/DOMSEARCH-0.1.660.tar.gz -> embassy-domsearch-0.1.660.tar.gz -_eclasses_=gnuconfig b6b3e92f8b8c996400074b5f61a59256 toolchain-funcs 3484f775017f532a8d1ae02c65defe13 multilib 4fbbbc98f236f1b43acd99476bc3cd85 libtool 241a8f577b9781a42a7421e53448a44e autotools 2fd69a56a527d12409ba43c733b7ac8f flag-o-matic a3abd6002fafb3022597be6b8d01f88b emboss-r3 ed4c0b270092039c992b771a26ca322a +_eclasses_=gnuconfig b6b3e92f8b8c996400074b5f61a59256 toolchain-funcs 1542e649be915f43f6908a9e93909961 multilib 5ca4e49abed8e3a2f7b56920eadee157 libtool 241a8f577b9781a42a7421e53448a44e autotools 9e6965bfaa00f52cc61e0d4bc44c87b3 flag-o-matic 629c5cdf86e3c68e26f2365c54c5d9f5 emboss-r3 ed4c0b270092039c992b771a26ca322a _md5_=e0ca10c2776835b0cd20c1b0f0721a1a diff --git a/metadata/md5-cache/sci-biology/embassy-emnu-1.05.660-r1 b/metadata/md5-cache/sci-biology/embassy-emnu-1.05.660-r1 index 3ba594874f03..4128c8ac6d40 100644 --- a/metadata/md5-cache/sci-biology/embassy-emnu-1.05.660-r1 +++ b/metadata/md5-cache/sci-biology/embassy-emnu-1.05.660-r1 @@ -11,5 +11,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=sys-libs/ncurses:0= dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/EMNU-1.05.660.tar.gz -> embassy-emnu-1.05.660.tar.gz -_eclasses_=gnuconfig b6b3e92f8b8c996400074b5f61a59256 toolchain-funcs 3484f775017f532a8d1ae02c65defe13 multilib 4fbbbc98f236f1b43acd99476bc3cd85 libtool 241a8f577b9781a42a7421e53448a44e autotools 2fd69a56a527d12409ba43c733b7ac8f flag-o-matic a3abd6002fafb3022597be6b8d01f88b emboss-r3 ed4c0b270092039c992b771a26ca322a +_eclasses_=gnuconfig b6b3e92f8b8c996400074b5f61a59256 toolchain-funcs 1542e649be915f43f6908a9e93909961 multilib 5ca4e49abed8e3a2f7b56920eadee157 libtool 241a8f577b9781a42a7421e53448a44e autotools 9e6965bfaa00f52cc61e0d4bc44c87b3 flag-o-matic 629c5cdf86e3c68e26f2365c54c5d9f5 emboss-r3 ed4c0b270092039c992b771a26ca322a _md5_=a33d45b5be798e7ebfcef8c59a300c88 diff --git a/metadata/md5-cache/sci-biology/embassy-esim4-1.0.0.660-r1 b/metadata/md5-cache/sci-biology/embassy-esim4-1.0.0.660-r1 index 76374138ef4e..a398ccfbdc8b 100644 --- a/metadata/md5-cache/sci-biology/embassy-esim4-1.0.0.660-r1 +++ b/metadata/md5-cache/sci-biology/embassy-esim4-1.0.0.660-r1 @@ -11,5 +11,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/ESIM4-1.0.0.660.tar.gz -> embassy-esim4-1.0.0.660.tar.gz -_eclasses_=gnuconfig b6b3e92f8b8c996400074b5f61a59256 toolchain-funcs 3484f775017f532a8d1ae02c65defe13 multilib 4fbbbc98f236f1b43acd99476bc3cd85 libtool 241a8f577b9781a42a7421e53448a44e autotools 2fd69a56a527d12409ba43c733b7ac8f flag-o-matic a3abd6002fafb3022597be6b8d01f88b emboss-r3 ed4c0b270092039c992b771a26ca322a +_eclasses_=gnuconfig b6b3e92f8b8c996400074b5f61a59256 toolchain-funcs 1542e649be915f43f6908a9e93909961 multilib 5ca4e49abed8e3a2f7b56920eadee157 libtool 241a8f577b9781a42a7421e53448a44e autotools 9e6965bfaa00f52cc61e0d4bc44c87b3 flag-o-matic 629c5cdf86e3c68e26f2365c54c5d9f5 emboss-r3 ed4c0b270092039c992b771a26ca322a _md5_=95026ca22c2bacedf52a70b4428e7753 diff --git a/metadata/md5-cache/sci-biology/embassy-hmmer-2.3.2.660-r1 b/metadata/md5-cache/sci-biology/embassy-hmmer-2.3.2.660-r1 index 70a38f6a90bd..94fdc87b2f54 100644 --- a/metadata/md5-cache/sci-biology/embassy-hmmer-2.3.2.660-r1 +++ b/metadata/md5-cache/sci-biology/embassy-hmmer-2.3.2.660-r1 @@ -11,5 +11,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=sci-biology/hmmer:2 dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/HMMER-2.3.2.660.tar.gz -> embassy-hmmer-2.3.2.660.tar.gz -_eclasses_=gnuconfig b6b3e92f8b8c996400074b5f61a59256 toolchain-funcs 3484f775017f532a8d1ae02c65defe13 multilib 4fbbbc98f236f1b43acd99476bc3cd85 libtool 241a8f577b9781a42a7421e53448a44e autotools 2fd69a56a527d12409ba43c733b7ac8f flag-o-matic a3abd6002fafb3022597be6b8d01f88b emboss-r3 ed4c0b270092039c992b771a26ca322a +_eclasses_=gnuconfig b6b3e92f8b8c996400074b5f61a59256 toolchain-funcs 1542e649be915f43f6908a9e93909961 multilib 5ca4e49abed8e3a2f7b56920eadee157 libtool 241a8f577b9781a42a7421e53448a44e autotools 9e6965bfaa00f52cc61e0d4bc44c87b3 flag-o-matic 629c5cdf86e3c68e26f2365c54c5d9f5 emboss-r3 ed4c0b270092039c992b771a26ca322a _md5_=fb64fb071ec661ab550e0b33bc78b536 diff --git a/metadata/md5-cache/sci-biology/embassy-iprscan-4.3.1.660-r1 b/metadata/md5-cache/sci-biology/embassy-iprscan-4.3.1.660-r1 index a56f61e9a3e2..6189d3824c74 100644 --- a/metadata/md5-cache/sci-biology/embassy-iprscan-4.3.1.660-r1 +++ b/metadata/md5-cache/sci-biology/embassy-iprscan-4.3.1.660-r1 @@ -11,5 +11,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/IPRSCAN-4.3.1.660.tar.gz -> embassy-iprscan-4.3.1.660.tar.gz -_eclasses_=gnuconfig b6b3e92f8b8c996400074b5f61a59256 toolchain-funcs 3484f775017f532a8d1ae02c65defe13 multilib 4fbbbc98f236f1b43acd99476bc3cd85 libtool 241a8f577b9781a42a7421e53448a44e autotools 2fd69a56a527d12409ba43c733b7ac8f flag-o-matic a3abd6002fafb3022597be6b8d01f88b emboss-r3 ed4c0b270092039c992b771a26ca322a +_eclasses_=gnuconfig b6b3e92f8b8c996400074b5f61a59256 toolchain-funcs 1542e649be915f43f6908a9e93909961 multilib 5ca4e49abed8e3a2f7b56920eadee157 libtool 241a8f577b9781a42a7421e53448a44e autotools 9e6965bfaa00f52cc61e0d4bc44c87b3 flag-o-matic 629c5cdf86e3c68e26f2365c54c5d9f5 emboss-r3 ed4c0b270092039c992b771a26ca322a _md5_=06b3cb4ecb53ada6b96c0f8fe91680e9 diff --git a/metadata/md5-cache/sci-biology/embassy-mse-3.0.0.660-r1 b/metadata/md5-cache/sci-biology/embassy-mse-3.0.0.660-r1 index d96ae3624cf5..b31919cbfa45 100644 --- a/metadata/md5-cache/sci-biology/embassy-mse-3.0.0.660-r1 +++ b/metadata/md5-cache/sci-biology/embassy-mse-3.0.0.660-r1 @@ -11,5 +11,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=sys-libs/ncurses:= dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/MSE-3.0.0.660.tar.gz -> embassy-mse-3.0.0.660.tar.gz -_eclasses_=gnuconfig b6b3e92f8b8c996400074b5f61a59256 toolchain-funcs 3484f775017f532a8d1ae02c65defe13 multilib 4fbbbc98f236f1b43acd99476bc3cd85 libtool 241a8f577b9781a42a7421e53448a44e autotools 2fd69a56a527d12409ba43c733b7ac8f flag-o-matic a3abd6002fafb3022597be6b8d01f88b emboss-r3 ed4c0b270092039c992b771a26ca322a +_eclasses_=gnuconfig b6b3e92f8b8c996400074b5f61a59256 toolchain-funcs 1542e649be915f43f6908a9e93909961 multilib 5ca4e49abed8e3a2f7b56920eadee157 libtool 241a8f577b9781a42a7421e53448a44e autotools 9e6965bfaa00f52cc61e0d4bc44c87b3 flag-o-matic 629c5cdf86e3c68e26f2365c54c5d9f5 emboss-r3 ed4c0b270092039c992b771a26ca322a _md5_=b6d66fbfe89f6c64f635551357dc90f4 diff --git a/metadata/md5-cache/sci-biology/embassy-phylipnew-3.69.660-r1 b/metadata/md5-cache/sci-biology/embassy-phylipnew-3.69.660-r1 index 64a5949806c7..147ec7228e8c 100644 --- a/metadata/md5-cache/sci-biology/embassy-phylipnew-3.69.660-r1 +++ b/metadata/md5-cache/sci-biology/embassy-phylipnew-3.69.660-r1 @@ -11,5 +11,5 @@ LICENSE=LGPL-2 GPL-2 free-noncomm RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/PHYLIPNEW-3.69.660.tar.gz -> embassy-phylipnew-3.69.660.tar.gz -_eclasses_=gnuconfig b6b3e92f8b8c996400074b5f61a59256 toolchain-funcs 3484f775017f532a8d1ae02c65defe13 multilib 4fbbbc98f236f1b43acd99476bc3cd85 libtool 241a8f577b9781a42a7421e53448a44e autotools 2fd69a56a527d12409ba43c733b7ac8f flag-o-matic a3abd6002fafb3022597be6b8d01f88b emboss-r3 ed4c0b270092039c992b771a26ca322a +_eclasses_=gnuconfig b6b3e92f8b8c996400074b5f61a59256 toolchain-funcs 1542e649be915f43f6908a9e93909961 multilib 5ca4e49abed8e3a2f7b56920eadee157 libtool 241a8f577b9781a42a7421e53448a44e autotools 9e6965bfaa00f52cc61e0d4bc44c87b3 flag-o-matic 629c5cdf86e3c68e26f2365c54c5d9f5 emboss-r3 ed4c0b270092039c992b771a26ca322a _md5_=93c762366f9cfe8fbfdffd0fdc0483d5 diff --git a/metadata/md5-cache/sci-biology/embassy-signature-0.1.660-r1 b/metadata/md5-cache/sci-biology/embassy-signature-0.1.660-r1 index 6727b4ffeafc..3cc274d93a34 100644 --- a/metadata/md5-cache/sci-biology/embassy-signature-0.1.660-r1 +++ b/metadata/md5-cache/sci-biology/embassy-signature-0.1.660-r1 @@ -11,5 +11,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/SIGNATURE-0.1.660.tar.gz -> embassy-signature-0.1.660.tar.gz -_eclasses_=gnuconfig b6b3e92f8b8c996400074b5f61a59256 toolchain-funcs 3484f775017f532a8d1ae02c65defe13 multilib 4fbbbc98f236f1b43acd99476bc3cd85 libtool 241a8f577b9781a42a7421e53448a44e autotools 2fd69a56a527d12409ba43c733b7ac8f flag-o-matic a3abd6002fafb3022597be6b8d01f88b emboss-r3 ed4c0b270092039c992b771a26ca322a +_eclasses_=gnuconfig b6b3e92f8b8c996400074b5f61a59256 toolchain-funcs 1542e649be915f43f6908a9e93909961 multilib 5ca4e49abed8e3a2f7b56920eadee157 libtool 241a8f577b9781a42a7421e53448a44e autotools 9e6965bfaa00f52cc61e0d4bc44c87b3 flag-o-matic 629c5cdf86e3c68e26f2365c54c5d9f5 emboss-r3 ed4c0b270092039c992b771a26ca322a _md5_=193e23282bfd7f7751d7e37988a0ec44 diff --git a/metadata/md5-cache/sci-biology/embassy-structure-0.1.660-r1 b/metadata/md5-cache/sci-biology/embassy-structure-0.1.660-r1 index 8efcc8fe5edc..a2b139f59e01 100644 --- a/metadata/md5-cache/sci-biology/embassy-structure-0.1.660-r1 +++ b/metadata/md5-cache/sci-biology/embassy-structure-0.1.660-r1 @@ -11,5 +11,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/STRUCTURE-0.1.660.tar.gz -> embassy-structure-0.1.660.tar.gz -_eclasses_=gnuconfig b6b3e92f8b8c996400074b5f61a59256 toolchain-funcs 3484f775017f532a8d1ae02c65defe13 multilib 4fbbbc98f236f1b43acd99476bc3cd85 libtool 241a8f577b9781a42a7421e53448a44e autotools 2fd69a56a527d12409ba43c733b7ac8f flag-o-matic a3abd6002fafb3022597be6b8d01f88b emboss-r3 ed4c0b270092039c992b771a26ca322a +_eclasses_=gnuconfig b6b3e92f8b8c996400074b5f61a59256 toolchain-funcs 1542e649be915f43f6908a9e93909961 multilib 5ca4e49abed8e3a2f7b56920eadee157 libtool 241a8f577b9781a42a7421e53448a44e autotools 9e6965bfaa00f52cc61e0d4bc44c87b3 flag-o-matic 629c5cdf86e3c68e26f2365c54c5d9f5 emboss-r3 ed4c0b270092039c992b771a26ca322a _md5_=c54138383c80476f9d515e5e2a33acaf diff --git a/metadata/md5-cache/sci-biology/embassy-topo-2.0.660-r1 b/metadata/md5-cache/sci-biology/embassy-topo-2.0.660-r1 index f57ab6861036..ff2c7390d605 100644 --- a/metadata/md5-cache/sci-biology/embassy-topo-2.0.660-r1 +++ b/metadata/md5-cache/sci-biology/embassy-topo-2.0.660-r1 @@ -11,5 +11,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/TOPO-2.0.660.tar.gz -> embassy-topo-2.0.660.tar.gz -_eclasses_=gnuconfig b6b3e92f8b8c996400074b5f61a59256 toolchain-funcs 3484f775017f532a8d1ae02c65defe13 multilib 4fbbbc98f236f1b43acd99476bc3cd85 libtool 241a8f577b9781a42a7421e53448a44e autotools 2fd69a56a527d12409ba43c733b7ac8f flag-o-matic a3abd6002fafb3022597be6b8d01f88b emboss-r3 ed4c0b270092039c992b771a26ca322a +_eclasses_=gnuconfig b6b3e92f8b8c996400074b5f61a59256 toolchain-funcs 1542e649be915f43f6908a9e93909961 multilib 5ca4e49abed8e3a2f7b56920eadee157 libtool 241a8f577b9781a42a7421e53448a44e autotools 9e6965bfaa00f52cc61e0d4bc44c87b3 flag-o-matic 629c5cdf86e3c68e26f2365c54c5d9f5 emboss-r3 ed4c0b270092039c992b771a26ca322a _md5_=30ddf1c7471e11d692477ffa5a3a9956 diff --git a/metadata/md5-cache/sci-biology/embassy-vienna-1.7.2.660-r1 b/metadata/md5-cache/sci-biology/embassy-vienna-1.7.2.660-r1 index ceaa87d55eae..684efebf7bfe 100644 --- a/metadata/md5-cache/sci-biology/embassy-vienna-1.7.2.660-r1 +++ b/metadata/md5-cache/sci-biology/embassy-vienna-1.7.2.660-r1 @@ -11,5 +11,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/VIENNA-1.7.2.660.tar.gz -> embassy-vienna-1.7.2.660.tar.gz -_eclasses_=gnuconfig b6b3e92f8b8c996400074b5f61a59256 toolchain-funcs 3484f775017f532a8d1ae02c65defe13 multilib 4fbbbc98f236f1b43acd99476bc3cd85 libtool 241a8f577b9781a42a7421e53448a44e autotools 2fd69a56a527d12409ba43c733b7ac8f flag-o-matic a3abd6002fafb3022597be6b8d01f88b emboss-r3 ed4c0b270092039c992b771a26ca322a +_eclasses_=gnuconfig b6b3e92f8b8c996400074b5f61a59256 toolchain-funcs 1542e649be915f43f6908a9e93909961 multilib 5ca4e49abed8e3a2f7b56920eadee157 libtool 241a8f577b9781a42a7421e53448a44e autotools 9e6965bfaa00f52cc61e0d4bc44c87b3 flag-o-matic 629c5cdf86e3c68e26f2365c54c5d9f5 emboss-r3 ed4c0b270092039c992b771a26ca322a _md5_=ba0cdfe4fa4ef35b15cb45a53f81f3b7 diff --git a/metadata/md5-cache/sci-biology/emboss-6.6.0-r2 b/metadata/md5-cache/sci-biology/emboss-6.6.0-r2 index 2d5f795acedc..f6baae8c2c62 100644 --- a/metadata/md5-cache/sci-biology/emboss-6.6.0-r2 +++ b/metadata/md5-cache/sci-biology/emboss-6.6.0-r2 @@ -12,5 +12,5 @@ PDEPEND=!minimal? ( sci-biology/aaindex sci-biology/cutg sci-biology/primer3 sci RDEPEND=!games-action/xbomber !sys-devel/cons dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/EMBOSS-6.6.0.tar.gz https://dev.gentoo.org/~soap/distfiles/emboss-6.6.0-patches-r1.tar.xz -_eclasses_=gnuconfig b6b3e92f8b8c996400074b5f61a59256 toolchain-funcs 3484f775017f532a8d1ae02c65defe13 multilib 4fbbbc98f236f1b43acd99476bc3cd85 libtool 241a8f577b9781a42a7421e53448a44e autotools 2fd69a56a527d12409ba43c733b7ac8f flag-o-matic a3abd6002fafb3022597be6b8d01f88b emboss-r3 ed4c0b270092039c992b771a26ca322a readme.gentoo-r1 b776ad4b42f564c406a95c41ccb42c55 +_eclasses_=gnuconfig b6b3e92f8b8c996400074b5f61a59256 toolchain-funcs 1542e649be915f43f6908a9e93909961 multilib 5ca4e49abed8e3a2f7b56920eadee157 libtool 241a8f577b9781a42a7421e53448a44e autotools 9e6965bfaa00f52cc61e0d4bc44c87b3 flag-o-matic 629c5cdf86e3c68e26f2365c54c5d9f5 emboss-r3 ed4c0b270092039c992b771a26ca322a readme.gentoo-r1 b776ad4b42f564c406a95c41ccb42c55 _md5_=9856dbbe227d34ba8fd5a46c30dc912f diff --git a/metadata/md5-cache/sci-biology/eugene-4.1d-r1 b/metadata/md5-cache/sci-biology/eugene-4.1d-r1 index d6884d1de6b5..f1b50905bf07 100644 --- a/metadata/md5-cache/sci-biology/eugene-4.1d-r1 +++ b/metadata/md5-cache/sci-biology/eugene-4.1d-r1 @@ -11,5 +11,5 @@ RDEPEND=media-libs/gd[png] media-libs/libpng:= RESTRICT=test SLOT=0 SRC_URI=https://mulcyber.toulouse.inra.fr/frs/download.php/1359/eugene-4.1d.tar.gz -_eclasses_=gnuconfig b6b3e92f8b8c996400074b5f61a59256 toolchain-funcs 3484f775017f532a8d1ae02c65defe13 multilib 4fbbbc98f236f1b43acd99476bc3cd85 libtool 241a8f577b9781a42a7421e53448a44e autotools 2fd69a56a527d12409ba43c733b7ac8f +_eclasses_=gnuconfig b6b3e92f8b8c996400074b5f61a59256 toolchain-funcs 1542e649be915f43f6908a9e93909961 multilib 5ca4e49abed8e3a2f7b56920eadee157 libtool 241a8f577b9781a42a7421e53448a44e autotools 9e6965bfaa00f52cc61e0d4bc44c87b3 _md5_=b4126568295c4b4191d28a10bcea4c55 diff --git a/metadata/md5-cache/sci-biology/exonerate-2.2.0-r3 b/metadata/md5-cache/sci-biology/exonerate-2.2.0-r3 index 934127a92efd..99e6baa842cf 100644 --- a/metadata/md5-cache/sci-biology/exonerate-2.2.0-r3 +++ b/metadata/md5-cache/sci-biology/exonerate-2.2.0-r3 @@ -13,5 +13,5 @@ REQUIRED_USE=test? ( utils ) RESTRICT=!test? ( test ) SLOT=0 SRC_URI=http://ftp.ebi.ac.uk/pub/software/vertebrategenomics/exonerate/exonerate-2.2.0.tar.gz -_eclasses_=gnuconfig b6b3e92f8b8c996400074b5f61a59256 toolchain-funcs 3484f775017f532a8d1ae02c65defe13 multilib 4fbbbc98f236f1b43acd99476bc3cd85 libtool 241a8f577b9781a42a7421e53448a44e autotools 2fd69a56a527d12409ba43c733b7ac8f +_eclasses_=gnuconfig b6b3e92f8b8c996400074b5f61a59256 toolchain-funcs 1542e649be915f43f6908a9e93909961 multilib 5ca4e49abed8e3a2f7b56920eadee157 libtool 241a8f577b9781a42a7421e53448a44e autotools 9e6965bfaa00f52cc61e0d4bc44c87b3 _md5_=1e7139985e79a73dd3eda616d23bafc0 diff --git a/metadata/md5-cache/sci-biology/express-1.5.1 b/metadata/md5-cache/sci-biology/express-1.5.1 index 99af818bfa1a..61d0fe2dcfc6 100644 --- a/metadata/md5-cache/sci-biology/express-1.5.1 +++ b/metadata/md5-cache/sci-biology/express-1.5.1 @@ -10,5 +10,5 @@ LICENSE=Artistic RDEPEND=>=dev-libs/boost-1.52.0:= dev-libs/protobuf dev-util/google-perftools sci-biology/bamtools sys-libs/zlib SLOT=0 SRC_URI=https://pachterlab.github.io/eXpress/downloads/express-1.5.1/express-1.5.1-src.tgz -_eclasses_=toolchain-funcs 3484f775017f532a8d1ae02c65defe13 multilib 4fbbbc98f236f1b43acd99476bc3cd85 edos2unix 33e347e171066657f91f8b0c72ec8773 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 wrapper 4a1902f969e5718126434fc35f3a0d9c eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic a3abd6002fafb3022597be6b8d01f88b multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 58ec4e54962bf45d065fb95030701514 xdg-utils fffb53a53cf17c9c0c998a3c0a590c7e cmake 44afbf15c35884f7c840470f1cf05d0d +_eclasses_=toolchain-funcs 1542e649be915f43f6908a9e93909961 multilib 5ca4e49abed8e3a2f7b56920eadee157 edos2unix 33e347e171066657f91f8b0c72ec8773 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 wrapper 4a1902f969e5718126434fc35f3a0d9c eutils 23cb2d46c80c12aa8b25973b4cdcb257 flag-o-matic 629c5cdf86e3c68e26f2365c54c5d9f5 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 58ec4e54962bf45d065fb95030701514 xdg-utils fffb53a53cf17c9c0c998a3c0a590c7e cmake 44afbf15c35884f7c840470f1cf05d0d _md5_=b4fcbc714ea460615318f4baa4bc347a diff --git a/metadata/md5-cache/sci-biology/fasta-36.3.8h-r1 b/metadata/md5-cache/sci-biology/fasta-36.3.8h-r1 index 80333c39ae6a..80367796c873 100644 --- a/metadata/md5-cache/sci-biology/fasta-36.3.8h-r1 +++ b/metadata/md5-cache/sci-biology/fasta-36.3.8h-r1 @@ -10,5 +10,5 @@ LICENSE=fasta RESTRICT=!test? ( test ) SLOT=0 SRC_URI=https://github.com/wrpearson/fasta36/archive/refs/tags/v36.3.8h_04-May-2020.tar.gz -> fasta-36.3.8h.tar.gz -_eclasses_=toolchain-funcs 3484f775017f532a8d1ae02c65defe13 multilib 4fbbbc98f236f1b43acd99476bc3cd85 flag-o-matic a3abd6002fafb3022597be6b8d01f88b +_eclasses_=toolchain-funcs 1542e649be915f43f6908a9e93909961 multilib 5ca4e49abed8e3a2f7b56920eadee157 flag-o-matic 629c5cdf86e3c68e26f2365c54c5d9f5 _md5_=741f3be1a17b816aabab39443236f37b diff --git a/metadata/md5-cache/sci-biology/fasttree-2.1.11 b/metadata/md5-cache/sci-biology/fasttree-2.1.11 index 128494278460..fd69dc92086c 100644 --- a/metadata/md5-cache/sci-biology/fasttree-2.1.11 +++ b/metadata/md5-cache/sci-biology/fasttree-2.1.11 @@ -10,5 +10,5 @@ LICENSE=GPL-2 REQUIRED_USE=?? ( double-precision cpu_flags_x86_sse3 ) SLOT=0 SRC_URI=http://www.microbesonline.org/fasttree/FastTree-2.1.11.c http://www.microbesonline.org/fasttree/FastTreeUPGMA.c -> FastTreeUPGMA-2.1.11.c http://www.microbesonline.org/fasttree/MOTreeComparison.tar.gz -> MOTreeComparison-2.1.11.tar.gz -_eclasses_=toolchain-funcs 3484f775017f532a8d1ae02c65defe13 multilib 4fbbbc98f236f1b43acd99476bc3cd85 edos2unix 33e347e171066657f91f8b0c72ec8773 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 wrapper 4a1902f969e5718126434fc35f3a0d9c eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic a3abd6002fafb3022597be6b8d01f88b multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 58ec4e54962bf45d065fb95030701514 xdg-utils fffb53a53cf17c9c0c998a3c0a590c7e cmake 44afbf15c35884f7c840470f1cf05d0d +_eclasses_=toolchain-funcs 1542e649be915f43f6908a9e93909961 multilib 5ca4e49abed8e3a2f7b56920eadee157 edos2unix 33e347e171066657f91f8b0c72ec8773 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 wrapper 4a1902f969e5718126434fc35f3a0d9c eutils 23cb2d46c80c12aa8b25973b4cdcb257 flag-o-matic 629c5cdf86e3c68e26f2365c54c5d9f5 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 58ec4e54962bf45d065fb95030701514 xdg-utils fffb53a53cf17c9c0c998a3c0a590c7e cmake 44afbf15c35884f7c840470f1cf05d0d _md5_=4a94b8db43f0aadb5ece67757ccbe635 diff --git a/metadata/md5-cache/sci-biology/fastx_toolkit-0.0.14-r1 b/metadata/md5-cache/sci-biology/fastx_toolkit-0.0.14-r1 index c8c866e42417..acd3c32ad7c6 100644 --- a/metadata/md5-cache/sci-biology/fastx_toolkit-0.0.14-r1 +++ b/metadata/md5-cache/sci-biology/fastx_toolkit-0.0.14-r1 @@ -10,5 +10,5 @@ LICENSE=AGPL-3 RDEPEND=sci-biology/libgtextutils:= dev-perl/PerlIO-gzip dev-perl/GDGraph sci-visualization/gnuplot SLOT=0 SRC_URI=https://github.com/agordon/fastx_toolkit/releases/download/0.0.14/fastx_toolkit-0.0.14.tar.bz2 -_eclasses_=gnuconfig b6b3e92f8b8c996400074b5f61a59256 toolchain-funcs 3484f775017f532a8d1ae02c65defe13 multilib 4fbbbc98f236f1b43acd99476bc3cd85 libtool 241a8f577b9781a42a7421e53448a44e autotools 2fd69a56a527d12409ba43c733b7ac8f +_eclasses_=gnuconfig b6b3e92f8b8c996400074b5f61a59256 toolchain-funcs 1542e649be915f43f6908a9e93909961 multilib 5ca4e49abed8e3a2f7b56920eadee157 libtool 241a8f577b9781a42a7421e53448a44e autotools 9e6965bfaa00f52cc61e0d4bc44c87b3 _md5_=e0ed8e935eca944dc874fee38c4435ad diff --git a/metadata/md5-cache/sci-biology/foldingathome-7.6.13-r1 b/metadata/md5-cache/sci-biology/foldingathome-7.6.13-r1 index 8eddd6570785..fb1a86c86779 100644 --- a/metadata/md5-cache/sci-biology/foldingathome-7.6.13-r1 +++ b/metadata/md5-cache/sci-biology/foldingathome-7.6.13-r1 @@ -11,5 +11,5 @@ RDEPEND=acct-group/foldingathome acct-group/video acct-user/foldingathome app-ar RESTRICT=mirror bindist strip SLOT=0 SRC_URI=https://download.foldingathome.org/releases/public/release/fahclient/centos-6.7-64bit/v7.6/fahclient_7.6.13-64bit-release.tar.bz2 -_eclasses_=toolchain-funcs 3484f775017f532a8d1ae02c65defe13 multilib 4fbbbc98f236f1b43acd99476bc3cd85 systemd 2736b403a83f194b59b767f3b344c2c1 +_eclasses_=toolchain-funcs 1542e649be915f43f6908a9e93909961 multilib 5ca4e49abed8e3a2f7b56920eadee157 systemd 2736b403a83f194b59b767f3b344c2c1 _md5_=f2ef46b617dbd53a6e9dbdd86ff70bf1 diff --git a/metadata/md5-cache/sci-biology/foldingathome-7.6.21 b/metadata/md5-cache/sci-biology/foldingathome-7.6.21 index cfb2b0c87e9f..2ee4b6cd2816 100644 --- a/metadata/md5-cache/sci-biology/foldingathome-7.6.21 +++ b/metadata/md5-cache/sci-biology/foldingathome-7.6.21 @@ -11,5 +11,5 @@ RDEPEND=acct-group/foldingathome acct-group/video acct-user/foldingathome app-ar RESTRICT=mirror bindist strip SLOT=0 SRC_URI=https://download.foldingathome.org/releases/public/release/fahclient/centos-6.7-64bit/v7.6/fahclient_7.6.21-64bit-release.tar.bz2 -_eclasses_=toolchain-funcs 3484f775017f532a8d1ae02c65defe13 multilib 4fbbbc98f236f1b43acd99476bc3cd85 systemd 2736b403a83f194b59b767f3b344c2c1 +_eclasses_=toolchain-funcs 1542e649be915f43f6908a9e93909961 multilib 5ca4e49abed8e3a2f7b56920eadee157 systemd 2736b403a83f194b59b767f3b344c2c1 _md5_=50de4ff6faf3b5ac3ed140d8e1653c23 diff --git a/metadata/md5-cache/sci-biology/glimmer-3.02b b/metadata/md5-cache/sci-biology/glimmer-3.02b index 5ba9f27ae1af..e768772a3691 100644 --- a/metadata/md5-cache/sci-biology/glimmer-3.02b +++ b/metadata/md5-cache/sci-biology/glimmer-3.02b @@ -8,5 +8,5 @@ LICENSE=Artistic RDEPEND=app-shells/tcsh sci-biology/elph SLOT=0 SRC_URI=https://ccb.jhu.edu/software/glimmer/glimmer302b.tar.gz -_eclasses_=toolchain-funcs 3484f775017f532a8d1ae02c65defe13 multilib 4fbbbc98f236f1b43acd99476bc3cd85 +_eclasses_=toolchain-funcs 1542e649be915f43f6908a9e93909961 multilib 5ca4e49abed8e3a2f7b56920eadee157 _md5_=a7e8ed9c8bc30ed68f4fc465709c2e3d diff --git a/metadata/md5-cache/sci-biology/glimmerhmm-3.0.1-r1 b/metadata/md5-cache/sci-biology/glimmerhmm-3.0.1-r1 index 8d2add3cc70d..a101ab0106d6 100644 --- a/metadata/md5-cache/sci-biology/glimmerhmm-3.0.1-r1 +++ b/metadata/md5-cache/sci-biology/glimmerhmm-3.0.1-r1 @@ -7,5 +7,5 @@ KEYWORDS=amd64 x86 LICENSE=Artistic SLOT=0 SRC_URI=ftp://ftp.cbcb.umd.edu/pub/software/glimmerhmm/GlimmerHMM-3.0.1.tar.gz -_eclasses_=toolchain-funcs 3484f775017f532a8d1ae02c65defe13 multilib 4fbbbc98f236f1b43acd99476bc3cd85 +_eclasses_=toolchain-funcs 1542e649be915f43f6908a9e93909961 multilib 5ca4e49abed8e3a2f7b56920eadee157 _md5_=9fc33629a982f35b93c18da772894fdd diff --git a/metadata/md5-cache/sci-biology/hmmer-2.3.2-r5 b/metadata/md5-cache/sci-biology/hmmer-2.3.2-r5 index 8b39afe7cc06..33948f04fee8 100644 --- a/metadata/md5-cache/sci-biology/hmmer-2.3.2-r5 +++ b/metadata/md5-cache/sci-biology/hmmer-2.3.2-r5 @@ -10,5 +10,5 @@ LICENSE=GPL-2 RESTRICT=!test? ( test ) SLOT=2 SRC_URI=http://eddylab.org/software/hmmer/2.3.2/hmmer-2.3.2.tar.gz -_eclasses_=toolchain-funcs 3484f775017f532a8d1ae02c65defe13 multilib 4fbbbc98f236f1b43acd99476bc3cd85 +_eclasses_=toolchain-funcs 1542e649be915f43f6908a9e93909961 multilib 5ca4e49abed8e3a2f7b56920eadee157 _md5_=5aebac9d4eaee8ecbd0bff74b7b68c5e diff --git a/metadata/md5-cache/sci-biology/hmmer-3.1_beta2-r1 b/metadata/md5-cache/sci-biology/hmmer-3.1_beta2-r1 index e435e13587d8..477dac9f00ce 100644 --- a/metadata/md5-cache/sci-biology/hmmer-3.1_beta2-r1 +++ b/metadata/md5-cache/sci-biology/hmmer-3.1_beta2-r1 @@ -12,5 +12,5 @@ RDEPEND=mpi? ( virtual/mpi ) gsl? ( sci-libs/gsl:= ) RESTRICT=!test? ( test ) SLOT=0 SRC_URI=http://eddylab.org/software/hmmer3/3.1b2/hmmer-3.1b2.tar.gz -_eclasses_=toolchain-funcs 3484f775017f532a8d1ae02c65defe13 multilib 4fbbbc98f236f1b43acd99476bc3cd85 +_eclasses_=toolchain-funcs 1542e649be915f43f6908a9e93909961 multilib 5ca4e49abed8e3a2f7b56920eadee157 _md5_=66609c69302596b8671531f5be5cf6c1 diff --git a/metadata/md5-cache/sci-biology/iedera-1.05-r2 b/metadata/md5-cache/sci-biology/iedera-1.05-r2 index 516ab94fe247..7f838d5765dd 100644 --- a/metadata/md5-cache/sci-biology/iedera-1.05-r2 +++ b/metadata/md5-cache/sci-biology/iedera-1.05-r2 @@ -8,5 +8,5 @@ KEYWORDS=~amd64 ~x86 LICENSE=GPL-2 SLOT=0 SRC_URI=http://bioinfo.lifl.fr/yass/files/iedera-1.05.tar.gz -_eclasses_=gnuconfig b6b3e92f8b8c996400074b5f61a59256 toolchain-funcs 3484f775017f532a8d1ae02c65defe13 multilib 4fbbbc98f236f1b43acd99476bc3cd85 libtool 241a8f577b9781a42a7421e53448a44e autotools 2fd69a56a527d12409ba43c733b7ac8f +_eclasses_=gnuconfig b6b3e92f8b8c996400074b5f61a59256 toolchain-funcs 1542e649be915f43f6908a9e93909961 multilib 5ca4e49abed8e3a2f7b56920eadee157 libtool 241a8f577b9781a42a7421e53448a44e autotools 9e6965bfaa00f52cc61e0d4bc44c87b3 _md5_=a94a95bf7657c616d7b48d8bc45068c7 diff --git a/metadata/md5-cache/sci-biology/infernal-1.0.2-r1 b/metadata/md5-cache/sci-biology/infernal-1.0.2-r1 index 9a04e3f8df5b..1148c1ad2e54 100644 --- a/metadata/md5-cache/sci-biology/infernal-1.0.2-r1 +++ b/metadata/md5-cache/sci-biology/infernal-1.0.2-r1 @@ -10,5 +10,5 @@ LICENSE=GPL-3 RDEPEND=mpi? ( virtual/mpi ) SLOT=0 SRC_URI=ftp://selab.janelia.org/pub/software/infernal/infernal-1.0.2.tar.gz -_eclasses_=toolchain-funcs 3484f775017f532a8d1ae02c65defe13 multilib 4fbbbc98f236f1b43acd99476bc3cd85 +_eclasses_=toolchain-funcs 1542e649be915f43f6908a9e93909961 multilib 5ca4e49abed8e3a2f7b56920eadee157 _md5_=a3b1f788e8f5b38e41b3a9e38f91fe88 diff --git a/metadata/md5-cache/sci-biology/kallisto-0.46.2 b/metadata/md5-cache/sci-biology/kallisto-0.46.2 index 4694f7a64c85..2b0e414306fb 100644 --- a/metadata/md5-cache/sci-biology/kallisto-0.46.2 +++ b/metadata/md5-cache/sci-biology/kallisto-0.46.2 @@ -12,5 +12,5 @@ RDEPEND=sci-libs/htslib:= sys-libs/zlib:= hdf5? ( sci-libs/hdf5:= ) RESTRICT=!test? ( test ) SLOT=0 SRC_URI=https://github.com/pachterlab/kallisto/archive/v0.46.2.tar.gz -> kallisto-0.46.2.tar.gz -_eclasses_=toolchain-funcs 3484f775017f532a8d1ae02c65defe13 multilib 4fbbbc98f236f1b43acd99476bc3cd85 edos2unix 33e347e171066657f91f8b0c72ec8773 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 wrapper 4a1902f969e5718126434fc35f3a0d9c eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic a3abd6002fafb3022597be6b8d01f88b multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 58ec4e54962bf45d065fb95030701514 xdg-utils fffb53a53cf17c9c0c998a3c0a590c7e cmake 44afbf15c35884f7c840470f1cf05d0d +_eclasses_=toolchain-funcs 1542e649be915f43f6908a9e93909961 multilib 5ca4e49abed8e3a2f7b56920eadee157 edos2unix 33e347e171066657f91f8b0c72ec8773 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 wrapper 4a1902f969e5718126434fc35f3a0d9c eutils 23cb2d46c80c12aa8b25973b4cdcb257 flag-o-matic 629c5cdf86e3c68e26f2365c54c5d9f5 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 58ec4e54962bf45d065fb95030701514 xdg-utils fffb53a53cf17c9c0c998a3c0a590c7e cmake 44afbf15c35884f7c840470f1cf05d0d _md5_=1b739cad0275e6dc5a320723611b78e9 diff --git a/metadata/md5-cache/sci-biology/lagan-2.0-r4 b/metadata/md5-cache/sci-biology/lagan-2.0-r4 index e449df6a88ae..7f6def6825ac 100644 --- a/metadata/md5-cache/sci-biology/lagan-2.0-r4 +++ b/metadata/md5-cache/sci-biology/lagan-2.0-r4 @@ -8,5 +8,5 @@ LICENSE=GPL-2 RDEPEND=dev-lang/perl SLOT=0 SRC_URI=http://lagan.stanford.edu/lagan_web/lagan20.tar.gz -_eclasses_=toolchain-funcs 3484f775017f532a8d1ae02c65defe13 multilib 4fbbbc98f236f1b43acd99476bc3cd85 +_eclasses_=toolchain-funcs 1542e649be915f43f6908a9e93909961 multilib 5ca4e49abed8e3a2f7b56920eadee157 _md5_=c4b4e347541c85d423cac28e03a104d4 diff --git a/metadata/md5-cache/sci-biology/libgtextutils-0.6.1-r1 b/metadata/md5-cache/sci-biology/libgtextutils-0.6.1-r1 index e91ee13b8fd1..b0d1ef0afbd8 100644 --- a/metadata/md5-cache/sci-biology/libgtextutils-0.6.1-r1 +++ b/metadata/md5-cache/sci-biology/libgtextutils-0.6.1-r1 @@ -8,5 +8,5 @@ KEYWORDS=~amd64 ~x86 LICENSE=AGPL-3 SLOT=0/0 SRC_URI=http://hannonlab.cshl.edu/fastx_toolkit/libgtextutils-0.6.1.tar.bz2 -_eclasses_=gnuconfig b6b3e92f8b8c996400074b5f61a59256 toolchain-funcs 3484f775017f532a8d1ae02c65defe13 multilib 4fbbbc98f236f1b43acd99476bc3cd85 libtool 241a8f577b9781a42a7421e53448a44e autotools 2fd69a56a527d12409ba43c733b7ac8f +_eclasses_=gnuconfig b6b3e92f8b8c996400074b5f61a59256 toolchain-funcs 1542e649be915f43f6908a9e93909961 multilib 5ca4e49abed8e3a2f7b56920eadee157 libtool 241a8f577b9781a42a7421e53448a44e autotools 9e6965bfaa00f52cc61e0d4bc44c87b3 _md5_=bf69c3370f31858d1ff072c30305ca99 diff --git a/metadata/md5-cache/sci-biology/mafft-7.490 b/metadata/md5-cache/sci-biology/mafft-7.490 index 2c8b8a0288b4..6b2690c24e18 100644 --- a/metadata/md5-cache/sci-biology/mafft-7.490 +++ b/metadata/md5-cache/sci-biology/mafft-7.490 @@ -7,5 +7,5 @@ KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux ~x64-macos LICENSE=BSD SLOT=0 SRC_URI=https://mafft.cbrc.jp/alignment/software/mafft-7.490-without-extensions-src.tgz -_eclasses_=toolchain-funcs 3484f775017f532a8d1ae02c65defe13 multilib 4fbbbc98f236f1b43acd99476bc3cd85 flag-o-matic a3abd6002fafb3022597be6b8d01f88b +_eclasses_=toolchain-funcs 1542e649be915f43f6908a9e93909961 multilib 5ca4e49abed8e3a2f7b56920eadee157 flag-o-matic 629c5cdf86e3c68e26f2365c54c5d9f5 _md5_=04971be2bc4044a9c136d12a7e51b23d diff --git a/metadata/md5-cache/sci-biology/maq-0.7.1-r3 b/metadata/md5-cache/sci-biology/maq-0.7.1-r3 index 8df53702e343..6711f4eafcba 100644 --- a/metadata/md5-cache/sci-biology/maq-0.7.1-r3 +++ b/metadata/md5-cache/sci-biology/maq-0.7.1-r3 @@ -10,5 +10,5 @@ LICENSE=GPL-3 RDEPEND=sys-libs/zlib SLOT=0 SRC_URI=mirror://sourceforge/maq/maq-0.7.1.tar.bz2 mirror://sourceforge/maq/calib-36.dat.gz -_eclasses_=gnuconfig b6b3e92f8b8c996400074b5f61a59256 toolchain-funcs 3484f775017f532a8d1ae02c65defe13 multilib 4fbbbc98f236f1b43acd99476bc3cd85 libtool 241a8f577b9781a42a7421e53448a44e autotools 2fd69a56a527d12409ba43c733b7ac8f +_eclasses_=gnuconfig b6b3e92f8b8c996400074b5f61a59256 toolchain-funcs 1542e649be915f43f6908a9e93909961 multilib 5ca4e49abed8e3a2f7b56920eadee157 libtool 241a8f577b9781a42a7421e53448a44e autotools 9e6965bfaa00f52cc61e0d4bc44c87b3 _md5_=063e8f4add19e5b685018dfb11be0196 diff --git a/metadata/md5-cache/sci-biology/maqview-0.2.5-r4 b/metadata/md5-cache/sci-biology/maqview-0.2.5-r4 index 91a32eb7f547..46812435eb4c 100644 --- a/metadata/md5-cache/sci-biology/maqview-0.2.5-r4 +++ b/metadata/md5-cache/sci-biology/maqview-0.2.5-r4 @@ -10,5 +10,5 @@ LICENSE=GPL-3 RDEPEND=media-libs/freeglut sys-libs/zlib sci-biology/maq SLOT=0 SRC_URI=mirror://sourceforge/maq/maqview-0.2.5.tar.gz -_eclasses_=gnuconfig b6b3e92f8b8c996400074b5f61a59256 toolchain-funcs 3484f775017f532a8d1ae02c65defe13 multilib 4fbbbc98f236f1b43acd99476bc3cd85 libtool 241a8f577b9781a42a7421e53448a44e autotools 2fd69a56a527d12409ba43c733b7ac8f +_eclasses_=gnuconfig b6b3e92f8b8c996400074b5f61a59256 toolchain-funcs 1542e649be915f43f6908a9e93909961 multilib 5ca4e49abed8e3a2f7b56920eadee157 libtool 241a8f577b9781a42a7421e53448a44e autotools 9e6965bfaa00f52cc61e0d4bc44c87b3 _md5_=ce6e22a8dca500f24263e27d73b9eda4 diff --git a/metadata/md5-cache/sci-biology/mcl-14.137 b/metadata/md5-cache/sci-biology/mcl-14.137 index 224437fea0ac..9b2daa01cc25 100644 --- a/metadata/md5-cache/sci-biology/mcl-14.137 +++ b/metadata/md5-cache/sci-biology/mcl-14.137 @@ -9,5 +9,5 @@ KEYWORDS=~amd64 ~x86 LICENSE=GPL-2 SLOT=0 SRC_URI=http://micans.org/mcl/src/mcl-14-137.tar.gz -_eclasses_=gnuconfig b6b3e92f8b8c996400074b5f61a59256 toolchain-funcs 3484f775017f532a8d1ae02c65defe13 multilib 4fbbbc98f236f1b43acd99476bc3cd85 libtool 241a8f577b9781a42a7421e53448a44e autotools 2fd69a56a527d12409ba43c733b7ac8f +_eclasses_=gnuconfig b6b3e92f8b8c996400074b5f61a59256 toolchain-funcs 1542e649be915f43f6908a9e93909961 multilib 5ca4e49abed8e3a2f7b56920eadee157 libtool 241a8f577b9781a42a7421e53448a44e autotools 9e6965bfaa00f52cc61e0d4bc44c87b3 _md5_=9779366f51f2fea08274072a9a019159 diff --git a/metadata/md5-cache/sci-biology/mosaik-2.2.30 b/metadata/md5-cache/sci-biology/mosaik-2.2.30 index 8e3010e705c5..6a999a72119a 100644 --- a/metadata/md5-cache/sci-biology/mosaik-2.2.30 +++ b/metadata/md5-cache/sci-biology/mosaik-2.2.30 @@ -7,5 +7,5 @@ KEYWORDS=~amd64 ~x86 LICENSE=GPL-2 SLOT=0 SRC_URI=https://github.com/wanpinglee/MOSAIK/archive/5c25216d3522d6a33e53875cd76a6d65001e4e67.tar.gz -> mosaik-2.2.30.tar.gz -_eclasses_=toolchain-funcs 3484f775017f532a8d1ae02c65defe13 multilib 4fbbbc98f236f1b43acd99476bc3cd85 edos2unix 33e347e171066657f91f8b0c72ec8773 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 wrapper 4a1902f969e5718126434fc35f3a0d9c eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic a3abd6002fafb3022597be6b8d01f88b vcs-snapshot 19dc666868420457132a7514d4621476 +_eclasses_=toolchain-funcs 1542e649be915f43f6908a9e93909961 multilib 5ca4e49abed8e3a2f7b56920eadee157 edos2unix 33e347e171066657f91f8b0c72ec8773 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 wrapper 4a1902f969e5718126434fc35f3a0d9c eutils 23cb2d46c80c12aa8b25973b4cdcb257 flag-o-matic 629c5cdf86e3c68e26f2365c54c5d9f5 vcs-snapshot 19dc666868420457132a7514d4621476 _md5_=b275a0e18dbe85d2a2e24cebc796c134 diff --git a/metadata/md5-cache/sci-biology/mothur-1.27.0-r1 b/metadata/md5-cache/sci-biology/mothur-1.27.0-r1 index 7e9e54858c19..4c60b3a2898f 100644 --- a/metadata/md5-cache/sci-biology/mothur-1.27.0-r1 +++ b/metadata/md5-cache/sci-biology/mothur-1.27.0-r1 @@ -11,5 +11,5 @@ LICENSE=GPL-3 RDEPEND=sci-biology/uchime mpi? ( virtual/mpi ) virtual/fortran SLOT=0 SRC_URI=https://www.mothur.org/w/images/c/cb/Mothur.1.27.0.zip -> mothur-1.27.0.zip -_eclasses_=toolchain-funcs 3484f775017f532a8d1ae02c65defe13 multilib 4fbbbc98f236f1b43acd99476bc3cd85 edos2unix 33e347e171066657f91f8b0c72ec8773 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 wrapper 4a1902f969e5718126434fc35f3a0d9c eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic a3abd6002fafb3022597be6b8d01f88b fortran-2 72d28c6872beb1e7cb99684b0ae4715d +_eclasses_=toolchain-funcs 1542e649be915f43f6908a9e93909961 multilib 5ca4e49abed8e3a2f7b56920eadee157 edos2unix 33e347e171066657f91f8b0c72ec8773 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 wrapper 4a1902f969e5718126434fc35f3a0d9c eutils 23cb2d46c80c12aa8b25973b4cdcb257 flag-o-matic 629c5cdf86e3c68e26f2365c54c5d9f5 fortran-2 72d28c6872beb1e7cb99684b0ae4715d _md5_=2a931ea6d0536a0cb3441d235f5d2d6b diff --git a/metadata/md5-cache/sci-biology/mrbayes-3.1.2-r2 b/metadata/md5-cache/sci-biology/mrbayes-3.1.2-r2 index 04145886de4a..21c26d466a43 100644 --- a/metadata/md5-cache/sci-biology/mrbayes-3.1.2-r2 +++ b/metadata/md5-cache/sci-biology/mrbayes-3.1.2-r2 @@ -10,5 +10,5 @@ LICENSE=GPL-2 RDEPEND=sys-libs/ncurses:= mpi? ( virtual/mpi ) readline? ( sys-libs/readline:= ) SLOT=0 SRC_URI=mirror://sourceforge/mrbayes/mrbayes-3.1.2.tar.gz -_eclasses_=toolchain-funcs 3484f775017f532a8d1ae02c65defe13 multilib 4fbbbc98f236f1b43acd99476bc3cd85 +_eclasses_=toolchain-funcs 1542e649be915f43f6908a9e93909961 multilib 5ca4e49abed8e3a2f7b56920eadee157 _md5_=5905565f0c29b3c7b9098cfb7a50e760 diff --git a/metadata/md5-cache/sci-biology/mummer-3.23-r1 b/metadata/md5-cache/sci-biology/mummer-3.23-r1 index 131482d38894..b4311f03b663 100644 --- a/metadata/md5-cache/sci-biology/mummer-3.23-r1 +++ b/metadata/md5-cache/sci-biology/mummer-3.23-r1 @@ -9,5 +9,5 @@ LICENSE=Artistic RDEPEND=app-shells/tcsh dev-lang/perl SLOT=0 SRC_URI=mirror://sourceforge/mummer/MUMmer3.23.tar.gz -_eclasses_=toolchain-funcs 3484f775017f532a8d1ae02c65defe13 multilib 4fbbbc98f236f1b43acd99476bc3cd85 flag-o-matic a3abd6002fafb3022597be6b8d01f88b +_eclasses_=toolchain-funcs 1542e649be915f43f6908a9e93909961 multilib 5ca4e49abed8e3a2f7b56920eadee157 flag-o-matic 629c5cdf86e3c68e26f2365c54c5d9f5 _md5_=7103f6fc8a8d965ba2e5b71b09010e1d diff --git a/metadata/md5-cache/sci-biology/muscle-3.8.31 b/metadata/md5-cache/sci-biology/muscle-3.8.31 index 7e0dc8884ee4..eea33522ee27 100644 --- a/metadata/md5-cache/sci-biology/muscle-3.8.31 +++ b/metadata/md5-cache/sci-biology/muscle-3.8.31 @@ -8,5 +8,5 @@ LICENSE=public-domain RDEPEND=!sci-libs/libmuscle SLOT=0 SRC_URI=http://www.drive5.com/muscle/downloads3.8.31/muscle3.8.31_src.tar.gz -_eclasses_=toolchain-funcs 3484f775017f532a8d1ae02c65defe13 multilib 4fbbbc98f236f1b43acd99476bc3cd85 +_eclasses_=toolchain-funcs 1542e649be915f43f6908a9e93909961 multilib 5ca4e49abed8e3a2f7b56920eadee157 _md5_=70730a85bf27816f07c7b7498e5adc91 diff --git a/metadata/md5-cache/sci-biology/newick-utils-1.6-r1 b/metadata/md5-cache/sci-biology/newick-utils-1.6-r1 index 1be1315594c7..c0ff8c76e862 100644 --- a/metadata/md5-cache/sci-biology/newick-utils-1.6-r1 +++ b/metadata/md5-cache/sci-biology/newick-utils-1.6-r1 @@ -11,5 +11,5 @@ LICENSE=BSD RDEPEND=xml? ( dev-libs/libxml2 ) !dev-games/libnw SLOT=0 SRC_URI=http://cegg.unige.ch/pub/newick-utils-1.6.tar.gz -_eclasses_=gnuconfig b6b3e92f8b8c996400074b5f61a59256 toolchain-funcs 3484f775017f532a8d1ae02c65defe13 multilib 4fbbbc98f236f1b43acd99476bc3cd85 libtool 241a8f577b9781a42a7421e53448a44e autotools 2fd69a56a527d12409ba43c733b7ac8f +_eclasses_=gnuconfig b6b3e92f8b8c996400074b5f61a59256 toolchain-funcs 1542e649be915f43f6908a9e93909961 multilib 5ca4e49abed8e3a2f7b56920eadee157 libtool 241a8f577b9781a42a7421e53448a44e autotools 9e6965bfaa00f52cc61e0d4bc44c87b3 _md5_=fac40fe86b457a75883a5eb465ce18d8 diff --git a/metadata/md5-cache/sci-biology/pals-1.0-r2 b/metadata/md5-cache/sci-biology/pals-1.0-r2 index be04dd22b7bb..d65994a35198 100644 --- a/metadata/md5-cache/sci-biology/pals-1.0-r2 +++ b/metadata/md5-cache/sci-biology/pals-1.0-r2 @@ -7,5 +7,5 @@ KEYWORDS=amd64 x86 LICENSE=public-domain SLOT=0 SRC_URI=http://www.drive5.com/pals/pals_source.tar.gz -> pals-1.0.tar.gz -_eclasses_=toolchain-funcs 3484f775017f532a8d1ae02c65defe13 multilib 4fbbbc98f236f1b43acd99476bc3cd85 +_eclasses_=toolchain-funcs 1542e649be915f43f6908a9e93909961 multilib 5ca4e49abed8e3a2f7b56920eadee157 _md5_=0374a4cc1893f560fdb963ab9e27c56b diff --git a/metadata/md5-cache/sci-biology/paml-4.9j b/metadata/md5-cache/sci-biology/paml-4.9j index df769fb2f8e8..f6dfb76b0b36 100644 --- a/metadata/md5-cache/sci-biology/paml-4.9j +++ b/metadata/md5-cache/sci-biology/paml-4.9j @@ -7,5 +7,5 @@ KEYWORDS=~amd64 ~x86 LICENSE=free-noncomm SLOT=0 SRC_URI=http://abacus.gene.ucl.ac.uk/software/paml4.9j.tgz -_eclasses_=toolchain-funcs 3484f775017f532a8d1ae02c65defe13 multilib 4fbbbc98f236f1b43acd99476bc3cd85 +_eclasses_=toolchain-funcs 1542e649be915f43f6908a9e93909961 multilib 5ca4e49abed8e3a2f7b56920eadee157 _md5_=236ce838eff8e04f8059e18110b3ff38 diff --git a/metadata/md5-cache/sci-biology/phrap-1.080812-r2 b/metadata/md5-cache/sci-biology/phrap-1.080812-r2 index 32a9655212e4..6f2ffae25172 100644 --- a/metadata/md5-cache/sci-biology/phrap-1.080812-r2 +++ b/metadata/md5-cache/sci-biology/phrap-1.080812-r2 @@ -9,5 +9,5 @@ RDEPEND=dev-lang/perl dev-perl/Tk RESTRICT=fetch SLOT=0 SRC_URI=phrap-1.080812-distrib.tar.gz -_eclasses_=toolchain-funcs 3484f775017f532a8d1ae02c65defe13 multilib 4fbbbc98f236f1b43acd99476bc3cd85 +_eclasses_=toolchain-funcs 1542e649be915f43f6908a9e93909961 multilib 5ca4e49abed8e3a2f7b56920eadee157 _md5_=8f5aa73e6a49ffbd5804d4ddea05b2b8 diff --git a/metadata/md5-cache/sci-biology/phred-071220-r2 b/metadata/md5-cache/sci-biology/phred-071220-r2 index 5a09503976ba..95c613a3b8c7 100644 --- a/metadata/md5-cache/sci-biology/phred-071220-r2 +++ b/metadata/md5-cache/sci-biology/phred-071220-r2 @@ -8,5 +8,5 @@ LICENSE=phrap RESTRICT=fetch SLOT=0 SRC_URI=phred-dist-071220.b-acd.tar.gz -_eclasses_=toolchain-funcs 3484f775017f532a8d1ae02c65defe13 multilib 4fbbbc98f236f1b43acd99476bc3cd85 +_eclasses_=toolchain-funcs 1542e649be915f43f6908a9e93909961 multilib 5ca4e49abed8e3a2f7b56920eadee157 _md5_=b4f0ecabb29f6151604a63619790300c diff --git a/metadata/md5-cache/sci-biology/phylip-3.698 b/metadata/md5-cache/sci-biology/phylip-3.698 index 81734bf95c17..4078d2b344dc 100644 --- a/metadata/md5-cache/sci-biology/phylip-3.698 +++ b/metadata/md5-cache/sci-biology/phylip-3.698 @@ -10,5 +10,5 @@ LICENSE=BSD-2 RDEPEND=x11-libs/libXaw !dev-lang/elixir SLOT=0 SRC_URI=http://evolution.gs.washington.edu/phylip/download/phylip-3.698.zip -_eclasses_=toolchain-funcs 3484f775017f532a8d1ae02c65defe13 multilib 4fbbbc98f236f1b43acd99476bc3cd85 edos2unix 33e347e171066657f91f8b0c72ec8773 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 wrapper 4a1902f969e5718126434fc35f3a0d9c eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic a3abd6002fafb3022597be6b8d01f88b +_eclasses_=toolchain-funcs 1542e649be915f43f6908a9e93909961 multilib 5ca4e49abed8e3a2f7b56920eadee157 edos2unix 33e347e171066657f91f8b0c72ec8773 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 wrapper 4a1902f969e5718126434fc35f3a0d9c eutils 23cb2d46c80c12aa8b25973b4cdcb257 flag-o-matic 629c5cdf86e3c68e26f2365c54c5d9f5 _md5_=b3a777c086ea4a6cd489efcb5bde7b66 diff --git a/metadata/md5-cache/sci-biology/phyml-2.4.5-r4 b/metadata/md5-cache/sci-biology/phyml-2.4.5-r4 index 94c923d0bd0b..1237e4c98743 100644 --- a/metadata/md5-cache/sci-biology/phyml-2.4.5-r4 +++ b/metadata/md5-cache/sci-biology/phyml-2.4.5-r4 @@ -7,5 +7,5 @@ KEYWORDS=amd64 ~ppc x86 LICENSE=GPL-2 SLOT=0 SRC_URI=http://www.lirmm.fr/~guindon/phyml_v2.4.5.tar.gz -_eclasses_=toolchain-funcs 3484f775017f532a8d1ae02c65defe13 multilib 4fbbbc98f236f1b43acd99476bc3cd85 +_eclasses_=toolchain-funcs 1542e649be915f43f6908a9e93909961 multilib 5ca4e49abed8e3a2f7b56920eadee157 _md5_=d7f38a7c0005dca5f3da1d1fbd9780ae diff --git a/metadata/md5-cache/sci-biology/piler-1.0-r2 b/metadata/md5-cache/sci-biology/piler-1.0-r2 index 9fe141077414..2628037e5044 100644 --- a/metadata/md5-cache/sci-biology/piler-1.0-r2 +++ b/metadata/md5-cache/sci-biology/piler-1.0-r2 @@ -8,5 +8,5 @@ LICENSE=public-domain RDEPEND=|| ( sci-biology/muscle sci-libs/libmuscle ) sci-biology/pals SLOT=0 SRC_URI=http://www.drive5.com/piler/piler_source.tar.gz -> piler-1.0.tar.gz -_eclasses_=toolchain-funcs 3484f775017f532a8d1ae02c65defe13 multilib 4fbbbc98f236f1b43acd99476bc3cd85 +_eclasses_=toolchain-funcs 1542e649be915f43f6908a9e93909961 multilib 5ca4e49abed8e3a2f7b56920eadee157 _md5_=5a8dffca1e2b80e93cf1efdff5fd3fd0 diff --git a/metadata/md5-cache/sci-biology/pilercr-1.0-r2 b/metadata/md5-cache/sci-biology/pilercr-1.0-r2 index 404925e62f4e..7bf72b1e00bd 100644 --- a/metadata/md5-cache/sci-biology/pilercr-1.0-r2 +++ b/metadata/md5-cache/sci-biology/pilercr-1.0-r2 @@ -7,5 +7,5 @@ KEYWORDS=amd64 x86 LICENSE=public-domain SLOT=0 SRC_URI=http://www.drive5.com/pilercr/pilercr1.06.tar.gz -> pilercr-1.0.tar.gz -_eclasses_=toolchain-funcs 3484f775017f532a8d1ae02c65defe13 multilib 4fbbbc98f236f1b43acd99476bc3cd85 +_eclasses_=toolchain-funcs 1542e649be915f43f6908a9e93909961 multilib 5ca4e49abed8e3a2f7b56920eadee157 _md5_=d6fca147863ed9ae98f77d0b6f762060 diff --git a/metadata/md5-cache/sci-biology/plink-1.90_pre140514 b/metadata/md5-cache/sci-biology/plink-1.90_pre140514 index 4875fa69536b..70084bb8c640 100644 --- a/metadata/md5-cache/sci-biology/plink-1.90_pre140514 +++ b/metadata/md5-cache/sci-biology/plink-1.90_pre140514 @@ -10,5 +10,5 @@ LICENSE=GPL-2 RDEPEND=sys-libs/zlib virtual/cblas virtual/lapack SLOT=0 SRC_URI=http://pngu.mgh.harvard.edu/~purcell/static/bin/plink140514/plink_src.zip -> plink-1.90_pre140514.zip -_eclasses_=toolchain-funcs 3484f775017f532a8d1ae02c65defe13 multilib 4fbbbc98f236f1b43acd99476bc3cd85 +_eclasses_=toolchain-funcs 1542e649be915f43f6908a9e93909961 multilib 5ca4e49abed8e3a2f7b56920eadee157 _md5_=419587bbc06b4b3717534c9c0148238b diff --git a/metadata/md5-cache/sci-biology/poa-2-r1 b/metadata/md5-cache/sci-biology/poa-2-r1 index c44145e1c7f6..e7cadacd197a 100644 --- a/metadata/md5-cache/sci-biology/poa-2-r1 +++ b/metadata/md5-cache/sci-biology/poa-2-r1 @@ -7,5 +7,5 @@ KEYWORDS=~amd64 ~x86 LICENSE=GPL-2 SLOT=0 SRC_URI=mirror://sourceforge/poamsa/poaV2.tar.gz -_eclasses_=toolchain-funcs 3484f775017f532a8d1ae02c65defe13 multilib 4fbbbc98f236f1b43acd99476bc3cd85 +_eclasses_=toolchain-funcs 1542e649be915f43f6908a9e93909961 multilib 5ca4e49abed8e3a2f7b56920eadee157 _md5_=d7bb9c94a05320cd21ff72a8beb56406 diff --git a/metadata/md5-cache/sci-biology/prank-140603-r1 b/metadata/md5-cache/sci-biology/prank-140603-r1 index 39ab753710bb..323fc1afeed7 100644 --- a/metadata/md5-cache/sci-biology/prank-140603-r1 +++ b/metadata/md5-cache/sci-biology/prank-140603-r1 @@ -7,5 +7,5 @@ KEYWORDS=~amd64 ~x86 LICENSE=GPL-3 SLOT=0 SRC_URI=http://wasabiapp.org/download/prank/prank.source.140603.tgz -_eclasses_=toolchain-funcs 3484f775017f532a8d1ae02c65defe13 multilib 4fbbbc98f236f1b43acd99476bc3cd85 +_eclasses_=toolchain-funcs 1542e649be915f43f6908a9e93909961 multilib 5ca4e49abed8e3a2f7b56920eadee157 _md5_=07f1836dd1c44c4ebf19bb6a59f7141a diff --git a/metadata/md5-cache/sci-biology/primer3-2.3.7-r1 b/metadata/md5-cache/sci-biology/primer3-2.3.7-r1 index 191d056fd138..e9577e5f8eba 100644 --- a/metadata/md5-cache/sci-biology/primer3-2.3.7-r1 +++ b/metadata/md5-cache/sci-biology/primer3-2.3.7-r1 @@ -8,5 +8,5 @@ KEYWORDS=~amd64 ~ppc ~ppc64 ~sparc ~x86 ~amd64-linux ~x86-linux ~ppc-macos ~spar LICENSE=GPL-2 SLOT=0 SRC_URI=mirror://sourceforge/project/primer3/primer3/2.3.7/primer3-2.3.7.tar.gz -_eclasses_=toolchain-funcs 3484f775017f532a8d1ae02c65defe13 multilib 4fbbbc98f236f1b43acd99476bc3cd85 +_eclasses_=toolchain-funcs 1542e649be915f43f6908a9e93909961 multilib 5ca4e49abed8e3a2f7b56920eadee157 _md5_=f0e187a7011db2129b8874b8bf3e3496 diff --git a/metadata/md5-cache/sci-biology/probcons-1.12-r1 b/metadata/md5-cache/sci-biology/probcons-1.12-r1 index 5783bfc0010a..4594f4554bda 100644 --- a/metadata/md5-cache/sci-biology/probcons-1.12-r1 +++ b/metadata/md5-cache/sci-biology/probcons-1.12-r1 @@ -8,5 +8,5 @@ LICENSE=public-domain RDEPEND=!sci-geosciences/gmt sci-visualization/gnuplot SLOT=0 SRC_URI=http://probcons.stanford.edu/probcons_v1_12.tar.gz -_eclasses_=toolchain-funcs 3484f775017f532a8d1ae02c65defe13 multilib 4fbbbc98f236f1b43acd99476bc3cd85 +_eclasses_=toolchain-funcs 1542e649be915f43f6908a9e93909961 multilib 5ca4e49abed8e3a2f7b56920eadee157 _md5_=0f60285a7f7c2929aed4404425c3fc40 diff --git a/metadata/md5-cache/sci-biology/prodigal-2.6.3-r1 b/metadata/md5-cache/sci-biology/prodigal-2.6.3-r1 index 8b80bdc56340..60208de585ac 100644 --- a/metadata/md5-cache/sci-biology/prodigal-2.6.3-r1 +++ b/metadata/md5-cache/sci-biology/prodigal-2.6.3-r1 @@ -7,5 +7,5 @@ KEYWORDS=~amd64 LICENSE=GPL-3 SLOT=0 SRC_URI=https://github.com/hyattpd/Prodigal/archive/v2.6.3.tar.gz -> prodigal-2.6.3.tar.gz -_eclasses_=toolchain-funcs 3484f775017f532a8d1ae02c65defe13 multilib 4fbbbc98f236f1b43acd99476bc3cd85 +_eclasses_=toolchain-funcs 1542e649be915f43f6908a9e93909961 multilib 5ca4e49abed8e3a2f7b56920eadee157 _md5_=fbd84f84d9eeda38c197893cf2c079c8 diff --git a/metadata/md5-cache/sci-biology/pysam-0.19.1 b/metadata/md5-cache/sci-biology/pysam-0.19.1 index 5c16744127a7..a5139a2d0b1e 100644 --- a/metadata/md5-cache/sci-biology/pysam-0.19.1 +++ b/metadata/md5-cache/sci-biology/pysam-0.19.1 @@ -13,5 +13,5 @@ REQUIRED_USE=|| ( python_targets_python3_8 python_targets_python3_9 python_targe RESTRICT=!test? ( test ) SLOT=0 SRC_URI=https://github.com/pysam-developers/pysam/archive/v0.19.1.tar.gz -> pysam-0.19.1.gh.tar.gz -_eclasses_=multibuild d26d81f242cb193d899a72bca423d0bd multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 toolchain-funcs 3484f775017f532a8d1ae02c65defe13 multilib 4fbbbc98f236f1b43acd99476bc3cd85 python-utils-r1 667174e2df1036a5520d3b3b3fb33e98 python-r1 e2883e4f04f0503cdf7f2954e2bf5e15 distutils-r1 a012c7f8c0a9dddadb3a4f56364c8f62 +_eclasses_=multibuild d26d81f242cb193d899a72bca423d0bd multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 toolchain-funcs 1542e649be915f43f6908a9e93909961 multilib 5ca4e49abed8e3a2f7b56920eadee157 python-utils-r1 667174e2df1036a5520d3b3b3fb33e98 python-r1 e2883e4f04f0503cdf7f2954e2bf5e15 distutils-r1 a012c7f8c0a9dddadb3a4f56364c8f62 _md5_=baed35c86cd8709cd139815786cd17ac diff --git a/metadata/md5-cache/sci-biology/qrna-2.0.3c-r3 b/metadata/md5-cache/sci-biology/qrna-2.0.3c-r3 index 60d5b8b3a286..4ebde0ea91f6 100644 --- a/metadata/md5-cache/sci-biology/qrna-2.0.3c-r3 +++ b/metadata/md5-cache/sci-biology/qrna-2.0.3c-r3 @@ -9,5 +9,5 @@ LICENSE=GPL-2 RDEPEND=dev-lang/perl sci-biology/hmmer:2 SLOT=0 SRC_URI=mirror://gentoo/qrna-2.0.3c.tar.bz2 -_eclasses_=toolchain-funcs 3484f775017f532a8d1ae02c65defe13 multilib 4fbbbc98f236f1b43acd99476bc3cd85 +_eclasses_=toolchain-funcs 1542e649be915f43f6908a9e93909961 multilib 5ca4e49abed8e3a2f7b56920eadee157 _md5_=fdc52d5355060d858ec78d793dc26d81 diff --git a/metadata/md5-cache/sci-biology/raxml-7.2.6 b/metadata/md5-cache/sci-biology/raxml-7.2.6 index 5bc4af921fd4..9bab2eba8e3a 100644 --- a/metadata/md5-cache/sci-biology/raxml-7.2.6 +++ b/metadata/md5-cache/sci-biology/raxml-7.2.6 @@ -9,5 +9,5 @@ LICENSE=GPL-2 REQUIRED_USE=cpu_flags_x86_sse3 SLOT=0 SRC_URI=http://wwwkramer.in.tum.de/exelixis/software/RAxML-7.2.6.tar.bz2 -_eclasses_=toolchain-funcs 3484f775017f532a8d1ae02c65defe13 multilib 4fbbbc98f236f1b43acd99476bc3cd85 edos2unix 33e347e171066657f91f8b0c72ec8773 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 wrapper 4a1902f969e5718126434fc35f3a0d9c eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic a3abd6002fafb3022597be6b8d01f88b +_eclasses_=toolchain-funcs 1542e649be915f43f6908a9e93909961 multilib 5ca4e49abed8e3a2f7b56920eadee157 edos2unix 33e347e171066657f91f8b0c72ec8773 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 wrapper 4a1902f969e5718126434fc35f3a0d9c eutils 23cb2d46c80c12aa8b25973b4cdcb257 flag-o-matic 629c5cdf86e3c68e26f2365c54c5d9f5 _md5_=14b77d8b019468c10a65f1358be0d8ae diff --git a/metadata/md5-cache/sci-biology/recon-1.08-r1 b/metadata/md5-cache/sci-biology/recon-1.08-r1 index 70f5a8aeb77b..ecb848cec1e0 100644 --- a/metadata/md5-cache/sci-biology/recon-1.08-r1 +++ b/metadata/md5-cache/sci-biology/recon-1.08-r1 @@ -9,5 +9,5 @@ LICENSE=GPL-2 RDEPEND=dev-lang/perl SLOT=0 SRC_URI=http://www.repeatmasker.org/RECON-1.08.tar.gz -_eclasses_=toolchain-funcs 3484f775017f532a8d1ae02c65defe13 multilib 4fbbbc98f236f1b43acd99476bc3cd85 +_eclasses_=toolchain-funcs 1542e649be915f43f6908a9e93909961 multilib 5ca4e49abed8e3a2f7b56920eadee157 _md5_=36772ec3438da03e296e39fc88b347ee diff --git a/metadata/md5-cache/sci-biology/rnaview-20040713-r5 b/metadata/md5-cache/sci-biology/rnaview-20040713-r5 index d8c2d981759b..e1fc1c7725c6 100644 --- a/metadata/md5-cache/sci-biology/rnaview-20040713-r5 +++ b/metadata/md5-cache/sci-biology/rnaview-20040713-r5 @@ -7,5 +7,5 @@ KEYWORDS=~amd64 ~x86 LICENSE=public-domain SLOT=0 SRC_URI=mirror://gentoo/rnaview-20040713.tar.bz2 -_eclasses_=toolchain-funcs 3484f775017f532a8d1ae02c65defe13 multilib 4fbbbc98f236f1b43acd99476bc3cd85 +_eclasses_=toolchain-funcs 1542e649be915f43f6908a9e93909961 multilib 5ca4e49abed8e3a2f7b56920eadee157 _md5_=dd5336243d83138448c13acb7f4d4ba2 diff --git a/metadata/md5-cache/sci-biology/samtools-0.1.20-r4 b/metadata/md5-cache/sci-biology/samtools-0.1.20-r4 index 005d0e2c9c03..590d027681a4 100644 --- a/metadata/md5-cache/sci-biology/samtools-0.1.20-r4 +++ b/metadata/md5-cache/sci-biology/samtools-0.1.20-r4 @@ -10,5 +10,5 @@ LICENSE=MIT RDEPEND=sys-libs/ncurses:0= dev-lang/perl SLOT=0.1-legacy SRC_URI=https://github.com/samtools/samtools/archive/0.1.20.tar.gz -> samtools-0.1.20.tar.gz -_eclasses_=toolchain-funcs 3484f775017f532a8d1ae02c65defe13 multilib 4fbbbc98f236f1b43acd99476bc3cd85 +_eclasses_=multilib 5ca4e49abed8e3a2f7b56920eadee157 toolchain-funcs 1542e649be915f43f6908a9e93909961 _md5_=89941c8b8d527ccc386063a3f533ef77 diff --git a/metadata/md5-cache/sci-biology/samtools-1.15.1 b/metadata/md5-cache/sci-biology/samtools-1.15.1 index 6811edc30bd5..888f6f264783 100644 --- a/metadata/md5-cache/sci-biology/samtools-1.15.1 +++ b/metadata/md5-cache/sci-biology/samtools-1.15.1 @@ -10,5 +10,5 @@ LICENSE=MIT RDEPEND=dev-lang/perl =sci-libs/htslib-1.15.1*:= sys-libs/ncurses:=[unicode(+)] sys-libs/zlib SLOT=0 SRC_URI=https://github.com/samtools/samtools/releases/download/1.15.1/samtools-1.15.1.tar.bz2 -_eclasses_=toolchain-funcs 3484f775017f532a8d1ae02c65defe13 multilib 4fbbbc98f236f1b43acd99476bc3cd85 +_eclasses_=toolchain-funcs 1542e649be915f43f6908a9e93909961 multilib 5ca4e49abed8e3a2f7b56920eadee157 _md5_=c347f2e80f020ce72d8f21220d346f1f diff --git a/metadata/md5-cache/sci-biology/seaview-4.6-r1 b/metadata/md5-cache/sci-biology/seaview-4.6-r1 index ace66802a3bb..328fce0a4cfb 100644 --- a/metadata/md5-cache/sci-biology/seaview-4.6-r1 +++ b/metadata/md5-cache/sci-biology/seaview-4.6-r1 @@ -11,5 +11,5 @@ LICENSE=public-domain RDEPEND=sci-biology/clustalw:2 sci-biology/phyml || ( sci-libs/libmuscle sci-biology/muscle ) sys-libs/zlib x11-libs/fltk:1[xft?] x11-libs/libX11 xft? ( x11-libs/libXft ) SLOT=0 SRC_URI=ftp://pbil.univ-lyon1.fr/pub/mol_phylogeny/seaview/archive/seaview_4.6.tar.gz -_eclasses_=desktop 22952d8f27cac191d75529d4c38e6bfa toolchain-funcs 3484f775017f532a8d1ae02c65defe13 multilib 4fbbbc98f236f1b43acd99476bc3cd85 +_eclasses_=desktop 22952d8f27cac191d75529d4c38e6bfa toolchain-funcs 1542e649be915f43f6908a9e93909961 multilib 5ca4e49abed8e3a2f7b56920eadee157 _md5_=a742711d8523a4e49524662c12d647c2 diff --git a/metadata/md5-cache/sci-biology/seqan-2.4.0-r1 b/metadata/md5-cache/sci-biology/seqan-2.4.0-r1 index 953e8bb215ed..014ee4c9b6b8 100644 --- a/metadata/md5-cache/sci-biology/seqan-2.4.0-r1 +++ b/metadata/md5-cache/sci-biology/seqan-2.4.0-r1 @@ -12,5 +12,5 @@ RDEPEND=app-arch/bzip2:= sys-libs/zlib !!sci-biology/seqan:2.0 !!sci-biology/seq REQUIRED_USE=cpu_flags_x86_sse4_1 SLOT=0 SRC_URI=https://github.com/seqan/seqan/archive/seqan-v2.4.0.tar.gz -_eclasses_=toolchain-funcs 3484f775017f532a8d1ae02c65defe13 multilib 4fbbbc98f236f1b43acd99476bc3cd85 edos2unix 33e347e171066657f91f8b0c72ec8773 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 wrapper 4a1902f969e5718126434fc35f3a0d9c eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic a3abd6002fafb3022597be6b8d01f88b multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 58ec4e54962bf45d065fb95030701514 xdg-utils fffb53a53cf17c9c0c998a3c0a590c7e cmake 44afbf15c35884f7c840470f1cf05d0d multibuild d26d81f242cb193d899a72bca423d0bd +_eclasses_=toolchain-funcs 1542e649be915f43f6908a9e93909961 multilib 5ca4e49abed8e3a2f7b56920eadee157 edos2unix 33e347e171066657f91f8b0c72ec8773 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 wrapper 4a1902f969e5718126434fc35f3a0d9c eutils 23cb2d46c80c12aa8b25973b4cdcb257 flag-o-matic 629c5cdf86e3c68e26f2365c54c5d9f5 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 58ec4e54962bf45d065fb95030701514 xdg-utils fffb53a53cf17c9c0c998a3c0a590c7e cmake 44afbf15c35884f7c840470f1cf05d0d multibuild d26d81f242cb193d899a72bca423d0bd _md5_=af3f619bf918af3c15697066b1de20bb diff --git a/metadata/md5-cache/sci-biology/seqan-3.1.0 b/metadata/md5-cache/sci-biology/seqan-3.1.0 index 75cf9db99d82..3ea6499ebbd5 100644 --- a/metadata/md5-cache/sci-biology/seqan-3.1.0 +++ b/metadata/md5-cache/sci-biology/seqan-3.1.0 @@ -12,5 +12,5 @@ RDEPEND=app-arch/bzip2:= dev-cpp/range-v3 dev-libs/cereal sci-libs/lemon sys-lib REQUIRED_USE=cpu_flags_x86_sse4_2 SLOT=0 SRC_URI=https://github.com/seqan/seqan3/releases/download/3.1.0/seqan3-3.1.0-Source.tar.xz -_eclasses_=toolchain-funcs 3484f775017f532a8d1ae02c65defe13 multilib 4fbbbc98f236f1b43acd99476bc3cd85 flag-o-matic a3abd6002fafb3022597be6b8d01f88b multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 58ec4e54962bf45d065fb95030701514 xdg-utils fffb53a53cf17c9c0c998a3c0a590c7e cmake 44afbf15c35884f7c840470f1cf05d0d +_eclasses_=toolchain-funcs 1542e649be915f43f6908a9e93909961 multilib 5ca4e49abed8e3a2f7b56920eadee157 flag-o-matic 629c5cdf86e3c68e26f2365c54c5d9f5 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 58ec4e54962bf45d065fb95030701514 xdg-utils fffb53a53cf17c9c0c998a3c0a590c7e cmake 44afbf15c35884f7c840470f1cf05d0d _md5_=327a33751512d78b13d5acd641ba3385 diff --git a/metadata/md5-cache/sci-biology/sibsim4-0.20 b/metadata/md5-cache/sci-biology/sibsim4-0.20 index db762e35d5dc..cc665ad4f6a6 100644 --- a/metadata/md5-cache/sci-biology/sibsim4-0.20 +++ b/metadata/md5-cache/sci-biology/sibsim4-0.20 @@ -7,5 +7,5 @@ KEYWORDS=amd64 x86 LICENSE=GPL-2 SLOT=0 SRC_URI=mirror://sourceforge/sibsim4/SIBsim4-0.20.tar.gz -_eclasses_=toolchain-funcs 3484f775017f532a8d1ae02c65defe13 multilib 4fbbbc98f236f1b43acd99476bc3cd85 +_eclasses_=toolchain-funcs 1542e649be915f43f6908a9e93909961 multilib 5ca4e49abed8e3a2f7b56920eadee157 _md5_=da65f25e1cebcf8c22efbffb6b2b5c95 diff --git a/metadata/md5-cache/sci-biology/sim4-20030921-r2 b/metadata/md5-cache/sci-biology/sim4-20030921-r2 index 215690be6246..d7b60fba3cc8 100644 --- a/metadata/md5-cache/sci-biology/sim4-20030921-r2 +++ b/metadata/md5-cache/sci-biology/sim4-20030921-r2 @@ -7,5 +7,5 @@ KEYWORDS=~amd64 ~ppc ~x86 LICENSE=GPL-2 SLOT=0 SRC_URI=mirror://gentoo/sim4-20030921.tar.gz -_eclasses_=toolchain-funcs 3484f775017f532a8d1ae02c65defe13 multilib 4fbbbc98f236f1b43acd99476bc3cd85 +_eclasses_=toolchain-funcs 1542e649be915f43f6908a9e93909961 multilib 5ca4e49abed8e3a2f7b56920eadee157 _md5_=d9ac88a2e3ccc00187d880fcca7f5db2 diff --git a/metadata/md5-cache/sci-biology/stride-20011129-r1 b/metadata/md5-cache/sci-biology/stride-20011129-r1 index 8a1462a232cd..5e6580f12db1 100644 --- a/metadata/md5-cache/sci-biology/stride-20011129-r1 +++ b/metadata/md5-cache/sci-biology/stride-20011129-r1 @@ -8,5 +8,5 @@ LICENSE=STRIDE RESTRICT=mirror bindist SLOT=0 SRC_URI=ftp://ftp.ebi.ac.uk/pub/software/unix/stride/src/stride.tar.gz -> stride-20011129.tar.gz https://dev.gentoo.org/~pacho/stride/stride-20060723-update.patch.bz2 -_eclasses_=toolchain-funcs 3484f775017f532a8d1ae02c65defe13 multilib 4fbbbc98f236f1b43acd99476bc3cd85 +_eclasses_=toolchain-funcs 1542e649be915f43f6908a9e93909961 multilib 5ca4e49abed8e3a2f7b56920eadee157 _md5_=9ec341e7ee97fc8fd15fa6e200e17bfd diff --git a/metadata/md5-cache/sci-biology/t-coffee-11.00-r3 b/metadata/md5-cache/sci-biology/t-coffee-11.00-r3 index 9f05e681ec48..2da26d35400d 100644 --- a/metadata/md5-cache/sci-biology/t-coffee-11.00-r3 +++ b/metadata/md5-cache/sci-biology/t-coffee-11.00-r3 @@ -8,5 +8,5 @@ LICENSE=GPL-2 RDEPEND=sci-biology/clustalw sci-chemistry/tm-align SLOT=0 SRC_URI=http://www.tcoffee.org/Packages/Beta/Latest/T-COFFEE_distribution_Version_11.00.4466924.tar.gz -_eclasses_=toolchain-funcs 3484f775017f532a8d1ae02c65defe13 multilib 4fbbbc98f236f1b43acd99476bc3cd85 flag-o-matic a3abd6002fafb3022597be6b8d01f88b +_eclasses_=toolchain-funcs 1542e649be915f43f6908a9e93909961 multilib 5ca4e49abed8e3a2f7b56920eadee157 flag-o-matic 629c5cdf86e3c68e26f2365c54c5d9f5 _md5_=4f19327a55b73328939540ced2179d21 diff --git a/metadata/md5-cache/sci-biology/treeviewx-0.5.1-r3 b/metadata/md5-cache/sci-biology/treeviewx-0.5.1-r3 index 77954b8f73ad..8e42903b4167 100644 --- a/metadata/md5-cache/sci-biology/treeviewx-0.5.1-r3 +++ b/metadata/md5-cache/sci-biology/treeviewx-0.5.1-r3 @@ -10,5 +10,5 @@ LICENSE=GPL-2 RDEPEND=x11-libs/wxGTK:3.0[X] SLOT=0 SRC_URI=http://darwin.zoology.gla.ac.uk/~rpage/treeviewx/download/0.5/tv-0.5.1.tar.gz -_eclasses_=gnuconfig b6b3e92f8b8c996400074b5f61a59256 toolchain-funcs 3484f775017f532a8d1ae02c65defe13 multilib 4fbbbc98f236f1b43acd99476bc3cd85 libtool 241a8f577b9781a42a7421e53448a44e autotools 2fd69a56a527d12409ba43c733b7ac8f edos2unix 33e347e171066657f91f8b0c72ec8773 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 wrapper 4a1902f969e5718126434fc35f3a0d9c eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic a3abd6002fafb3022597be6b8d01f88b wxwidgets c09e9b94378cadaf6ef86ec1534c0fd6 +_eclasses_=gnuconfig b6b3e92f8b8c996400074b5f61a59256 toolchain-funcs 1542e649be915f43f6908a9e93909961 multilib 5ca4e49abed8e3a2f7b56920eadee157 libtool 241a8f577b9781a42a7421e53448a44e autotools 9e6965bfaa00f52cc61e0d4bc44c87b3 edos2unix 33e347e171066657f91f8b0c72ec8773 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 wrapper 4a1902f969e5718126434fc35f3a0d9c eutils 23cb2d46c80c12aa8b25973b4cdcb257 flag-o-matic 629c5cdf86e3c68e26f2365c54c5d9f5 wxwidgets c09e9b94378cadaf6ef86ec1534c0fd6 _md5_=14493f936bb599dd7faec748cece70f3 diff --git a/metadata/md5-cache/sci-biology/trnascan-se-1.31-r2 b/metadata/md5-cache/sci-biology/trnascan-se-1.31-r2 index 565868068fd9..e43e94add155 100644 --- a/metadata/md5-cache/sci-biology/trnascan-se-1.31-r2 +++ b/metadata/md5-cache/sci-biology/trnascan-se-1.31-r2 @@ -9,5 +9,5 @@ LICENSE=GPL-2 RDEPEND=dev-lang/perl:= SLOT=0 SRC_URI=http://lowelab.ucsc.edu/software/tRNAscan-SE.tar.gz -> trnascan-se-1.31.tar.gz -_eclasses_=perl-functions c3fca037246e877693badea0df3b0ef8 toolchain-funcs 3484f775017f532a8d1ae02c65defe13 multilib 4fbbbc98f236f1b43acd99476bc3cd85 +_eclasses_=perl-functions c3fca037246e877693badea0df3b0ef8 toolchain-funcs 1542e649be915f43f6908a9e93909961 multilib 5ca4e49abed8e3a2f7b56920eadee157 _md5_=573bacb37768044a51d4a9ab21cdcf8c diff --git a/metadata/md5-cache/sci-biology/uchime-4.2.40-r1 b/metadata/md5-cache/sci-biology/uchime-4.2.40-r1 index 3ae1b55fcf7e..b8a3bc96c390 100644 --- a/metadata/md5-cache/sci-biology/uchime-4.2.40-r1 +++ b/metadata/md5-cache/sci-biology/uchime-4.2.40-r1 @@ -8,5 +8,5 @@ KEYWORDS=amd64 x86 ~amd64-linux ~x86-linux LICENSE=public-domain SLOT=0 SRC_URI=https://www.drive5.com/uchime/uchime4.2.40_src.tar.gz -_eclasses_=toolchain-funcs 3484f775017f532a8d1ae02c65defe13 multilib 4fbbbc98f236f1b43acd99476bc3cd85 flag-o-matic a3abd6002fafb3022597be6b8d01f88b multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 58ec4e54962bf45d065fb95030701514 xdg-utils fffb53a53cf17c9c0c998a3c0a590c7e cmake 44afbf15c35884f7c840470f1cf05d0d +_eclasses_=toolchain-funcs 1542e649be915f43f6908a9e93909961 multilib 5ca4e49abed8e3a2f7b56920eadee157 flag-o-matic 629c5cdf86e3c68e26f2365c54c5d9f5 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 58ec4e54962bf45d065fb95030701514 xdg-utils fffb53a53cf17c9c0c998a3c0a590c7e cmake 44afbf15c35884f7c840470f1cf05d0d _md5_=75e1e97ed1a0b22c90eebd09f4e46d59 diff --git a/metadata/md5-cache/sci-biology/ucsc-genome-browser-260-r1 b/metadata/md5-cache/sci-biology/ucsc-genome-browser-260-r1 index 63ddb5e7c7e8..34f1e452587b 100644 --- a/metadata/md5-cache/sci-biology/ucsc-genome-browser-260-r1 +++ b/metadata/md5-cache/sci-biology/ucsc-genome-browser-260-r1 @@ -11,5 +11,5 @@ RDEPEND=dev-libs/openssl:0= media-libs/libpng:0= !<sci-biology/ucsc-genome-brows REQUIRED_USE=server? ( mysql ) SLOT=0 SRC_URI=http://hgdownload.cse.ucsc.edu/admin/jksrc.v260.zip -_eclasses_=toolchain-funcs 3484f775017f532a8d1ae02c65defe13 multilib 4fbbbc98f236f1b43acd99476bc3cd85 desktop 22952d8f27cac191d75529d4c38e6bfa edos2unix 33e347e171066657f91f8b0c72ec8773 estack 055c42df72f76a4f45ec92b35e83cd56 epatch 6af347b3c27477b48efaaa1261a0dd69 ltprune 97143780d341cc8d8f1d4c6187a36d29 preserve-libs a8e50acee31b5759b4df1f7707cae54b strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 vcs-clean d271b7bc7e6a009758d7d4ef749174e3 wrapper 4a1902f969e5718126434fc35f3a0d9c eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic a3abd6002fafb3022597be6b8d01f88b webapp d872f28d7595b70dd46545199ef35fb0 +_eclasses_=toolchain-funcs 1542e649be915f43f6908a9e93909961 multilib 5ca4e49abed8e3a2f7b56920eadee157 desktop 22952d8f27cac191d75529d4c38e6bfa edos2unix 33e347e171066657f91f8b0c72ec8773 estack 055c42df72f76a4f45ec92b35e83cd56 epatch 447396341f5f896d722e435a06f87a4f ltprune 97143780d341cc8d8f1d4c6187a36d29 preserve-libs a8e50acee31b5759b4df1f7707cae54b strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 vcs-clean d271b7bc7e6a009758d7d4ef749174e3 wrapper 4a1902f969e5718126434fc35f3a0d9c eutils 23cb2d46c80c12aa8b25973b4cdcb257 flag-o-matic 629c5cdf86e3c68e26f2365c54c5d9f5 webapp d872f28d7595b70dd46545199ef35fb0 _md5_=35cb93e40ad2d78c190e860dd3944557 diff --git a/metadata/md5-cache/sci-biology/unafold-3.8-r1 b/metadata/md5-cache/sci-biology/unafold-3.8-r1 index a95ed4d66784..9a0e418a382d 100644 --- a/metadata/md5-cache/sci-biology/unafold-3.8-r1 +++ b/metadata/md5-cache/sci-biology/unafold-3.8-r1 @@ -10,5 +10,5 @@ LICENSE=unafold RDEPEND=media-libs/freeglut media-libs/gd virtual/opengl SLOT=0 SRC_URI=http://dinamelt.bioinfo.rpi.edu/download/unafold-3.8.tar.bz2 -_eclasses_=toolchain-funcs 3484f775017f532a8d1ae02c65defe13 multilib 4fbbbc98f236f1b43acd99476bc3cd85 edos2unix 33e347e171066657f91f8b0c72ec8773 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 wrapper 4a1902f969e5718126434fc35f3a0d9c eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic a3abd6002fafb3022597be6b8d01f88b +_eclasses_=toolchain-funcs 1542e649be915f43f6908a9e93909961 multilib 5ca4e49abed8e3a2f7b56920eadee157 edos2unix 33e347e171066657f91f8b0c72ec8773 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 wrapper 4a1902f969e5718126434fc35f3a0d9c eutils 23cb2d46c80c12aa8b25973b4cdcb257 flag-o-matic 629c5cdf86e3c68e26f2365c54c5d9f5 _md5_=140380fdaf468f37ce9bb27d0026ec8e diff --git a/metadata/md5-cache/sci-biology/vcftools-0.1.16 b/metadata/md5-cache/sci-biology/vcftools-0.1.16 index b2d5ca1c00bf..28aee2c6883a 100644 --- a/metadata/md5-cache/sci-biology/vcftools-0.1.16 +++ b/metadata/md5-cache/sci-biology/vcftools-0.1.16 @@ -11,5 +11,5 @@ LICENSE=LGPL-3 RDEPEND=sys-libs/zlib dev-lang/perl:= lapack? ( virtual/lapack ) SLOT=0 SRC_URI=https://github.com/vcftools/vcftools/releases/download/v0.1.16/vcftools-0.1.16.tar.gz -_eclasses_=gnuconfig b6b3e92f8b8c996400074b5f61a59256 toolchain-funcs 3484f775017f532a8d1ae02c65defe13 multilib 4fbbbc98f236f1b43acd99476bc3cd85 libtool 241a8f577b9781a42a7421e53448a44e autotools 2fd69a56a527d12409ba43c733b7ac8f flag-o-matic a3abd6002fafb3022597be6b8d01f88b perl-functions c3fca037246e877693badea0df3b0ef8 +_eclasses_=gnuconfig b6b3e92f8b8c996400074b5f61a59256 toolchain-funcs 1542e649be915f43f6908a9e93909961 multilib 5ca4e49abed8e3a2f7b56920eadee157 libtool 241a8f577b9781a42a7421e53448a44e autotools 9e6965bfaa00f52cc61e0d4bc44c87b3 flag-o-matic 629c5cdf86e3c68e26f2365c54c5d9f5 perl-functions c3fca037246e877693badea0df3b0ef8 _md5_=faeb202e0aded0cb660ea87d6d7be81b diff --git a/metadata/md5-cache/sci-biology/velvet-1.2.10 b/metadata/md5-cache/sci-biology/velvet-1.2.10 index 74b559584531..a47a7e2c16b7 100644 --- a/metadata/md5-cache/sci-biology/velvet-1.2.10 +++ b/metadata/md5-cache/sci-biology/velvet-1.2.10 @@ -9,5 +9,5 @@ KEYWORDS=~amd64 ~x86 LICENSE=GPL-2 SLOT=0 SRC_URI=https://www.ebi.ac.uk/~zerbino/velvet/velvet_1.2.10.tgz -_eclasses_=toolchain-funcs 3484f775017f532a8d1ae02c65defe13 multilib 4fbbbc98f236f1b43acd99476bc3cd85 flag-o-matic a3abd6002fafb3022597be6b8d01f88b +_eclasses_=toolchain-funcs 1542e649be915f43f6908a9e93909961 multilib 5ca4e49abed8e3a2f7b56920eadee157 flag-o-matic 629c5cdf86e3c68e26f2365c54c5d9f5 _md5_=f48eb0348a1ac91d41dde22d3ced2ea1 diff --git a/metadata/md5-cache/sci-biology/wise-2.4.0_alpha-r1 b/metadata/md5-cache/sci-biology/wise-2.4.0_alpha-r1 index fde196911581..297429b97a2a 100644 --- a/metadata/md5-cache/sci-biology/wise-2.4.0_alpha-r1 +++ b/metadata/md5-cache/sci-biology/wise-2.4.0_alpha-r1 @@ -11,5 +11,5 @@ LICENSE=BSD RDEPEND=~sci-biology/hmmer-2.3.2 SLOT=0 SRC_URI=ftp://ftp.ebi.ac.uk/pub/software/wise2/wise2.4.0alpha.tar.gz https://dev.gentoo.org/~mgorny/dist/wise-2.4.0_alpha-patchset.tar.bz2 -_eclasses_=toolchain-funcs 3484f775017f532a8d1ae02c65defe13 multilib 4fbbbc98f236f1b43acd99476bc3cd85 +_eclasses_=toolchain-funcs 1542e649be915f43f6908a9e93909961 multilib 5ca4e49abed8e3a2f7b56920eadee157 _md5_=34f9a1f8b8f239e402200b9b5cb4f3cc diff --git a/metadata/md5-cache/sci-biology/yass-1.14-r3 b/metadata/md5-cache/sci-biology/yass-1.14-r3 index dffc7d55fb6b..e20f9ee8f325 100644 --- a/metadata/md5-cache/sci-biology/yass-1.14-r3 +++ b/metadata/md5-cache/sci-biology/yass-1.14-r3 @@ -11,5 +11,5 @@ LICENSE=GPL-2 RDEPEND=dmalloc? ( dev-libs/dmalloc ) SLOT=0 SRC_URI=http://bioinfo.lifl.fr/yass/files/yass-1.14.tar.gz -_eclasses_=gnuconfig b6b3e92f8b8c996400074b5f61a59256 toolchain-funcs 3484f775017f532a8d1ae02c65defe13 multilib 4fbbbc98f236f1b43acd99476bc3cd85 libtool 241a8f577b9781a42a7421e53448a44e autotools 2fd69a56a527d12409ba43c733b7ac8f +_eclasses_=gnuconfig b6b3e92f8b8c996400074b5f61a59256 toolchain-funcs 1542e649be915f43f6908a9e93909961 multilib 5ca4e49abed8e3a2f7b56920eadee157 libtool 241a8f577b9781a42a7421e53448a44e autotools 9e6965bfaa00f52cc61e0d4bc44c87b3 _md5_=9e0eb1b35801ce703a9a397be6421d47 |