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author | Andreas Sturmlechner <asturm@gentoo.org> | 2018-10-14 21:36:08 +0200 |
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committer | Andreas Sturmlechner <asturm@gentoo.org> | 2018-10-14 21:36:08 +0200 |
commit | e4efd52cc1039b2bb947e0fcd8f0b4047a660c87 (patch) | |
tree | 15fd5b4777c93b9add6cb6986fb111c55c233215 /sci-chemistry | |
parent | sci-chemistry/openbabel-python: Drop 2.3.2 (diff) | |
download | gentoo-e4efd52cc1039b2bb947e0fcd8f0b4047a660c87.tar.gz gentoo-e4efd52cc1039b2bb947e0fcd8f0b4047a660c87.tar.bz2 gentoo-e4efd52cc1039b2bb947e0fcd8f0b4047a660c87.zip |
sci-chemistry/openbabel-perl: Drop 2.3.2
Signed-off-by: Andreas Sturmlechner <asturm@gentoo.org>
Package-Manager: Portage-2.3.51, Repoman-2.3.11
Diffstat (limited to 'sci-chemistry')
4 files changed, 0 insertions, 222 deletions
diff --git a/sci-chemistry/openbabel-perl/Manifest b/sci-chemistry/openbabel-perl/Manifest index b44e078a63a8..ac268758e8cb 100644 --- a/sci-chemistry/openbabel-perl/Manifest +++ b/sci-chemistry/openbabel-perl/Manifest @@ -1,2 +1 @@ -DIST openbabel-2.3.2.tar.gz 20509105 BLAKE2B d475c2da0d7171650eeb4b78a948421b783bdbb9342c81114d3dbc19d5cbb273f7303438920ffaeef5b6332e4b72606a86ded5cbd3d7e541f62b59b46483bb69 SHA512 d0e1f8b758ffdd65ec6c31d988bffe3279355e286ce69fad12c5905b3b832e2b73ee95b1061b1576aba1ee9fe4da5e31ec30350c473be17493c657dc80caf919 DIST openbabel-2.4.1.tar.gz 11618304 BLAKE2B 8fc051e83add9be6456e281a109bd6bbec282a64ffc83309819f0decbf167b4914fbb7f1966e95e103f268754045b804317f51c79a952ace707c6af2bd320125 SHA512 427e678f0a911bd27b9a8a05e60b6e09f113be4e5dd180daaf80c28d06368e52b57501261755ab3817a8d31f2754db24471fd0ceee706d029386d6f70800e9c6 diff --git a/sci-chemistry/openbabel-perl/files/openbabel-perl-2.3.2-bindings_only.patch b/sci-chemistry/openbabel-perl/files/openbabel-perl-2.3.2-bindings_only.patch deleted file mode 100644 index 92e126a77d86..000000000000 --- a/sci-chemistry/openbabel-perl/files/openbabel-perl-2.3.2-bindings_only.patch +++ /dev/null @@ -1,108 +0,0 @@ -diff --git a/CMakeLists.txt b/CMakeLists.txt -index 449f4b4..1c9ad00 100644 ---- a/CMakeLists.txt -+++ b/CMakeLists.txt -@@ -252,7 +252,8 @@ if(NOT MSVC) - } - " SCANDIR_NEEDS_CONST) - -- set(OB_MODULE_PATH "${CMAKE_INSTALL_PREFIX}/${OB_PLUGIN_INSTALL_DIR}") -+ set(OB_MODULE_PATH "${CMAKE_INSTALL_PREFIX}/${OB_PLUGIN_INSTALL_DIR}" -+ CACHE PATH "Set to system install for bindings only build") - add_definitions(-DOB_MODULE_PATH="\\"${OB_MODULE_PATH}\\"") - - # Add some visibility support when using GCC -@@ -380,7 +381,8 @@ if(UNIX AND BUILD_SHARED) - if(APPLE) - set(CMAKE_INSTALL_NAME_DIR ${CMAKE_INSTALL_PREFIX}/${LIB_INSTALL_DIR}) - else() -- set(CMAKE_INSTALL_RPATH "${CMAKE_INSTALL_PREFIX}/${LIB_INSTALL_DIR}") -+ set(CMAKE_INSTALL_RPATH "${CMAKE_INSTALL_PREFIX}/${LIB_INSTALL_DIR}" -+ CACHE PATH "Set sane rpath") - set(CMAKE_SKIP_BUILD_RPATH FALSE) - set(CMAKE_BUILD_WITH_INSTALL_RPATH FALSE) - set(CMAKE_INSTALL_RPATH_USE_LINK_PATH TRUE) -@@ -477,6 +479,13 @@ endif() - # Should the language bindings be regenereted? - option(RUN_SWIG "Generate language bindings with SWIG" OFF) - -+# Build bindings only -+option(BINDINGS_ONLY "Build bindings only" OFF) -+ -+# Point to library if building bindings only -+set(BABEL_SYSTEM_LIBRARY ${BABEL_LIBRARY} -+ CACHE PATH "Point to openbabel library if building bindings only") -+ - # Should all bindings be built? - option(ALL_BINDINGS "Build all languages bindings" OFF) - -diff --git a/scripts/CMakeLists.txt b/scripts/CMakeLists.txt -index 16e9000..8f92e91 100644 ---- a/scripts/CMakeLists.txt -+++ b/scripts/CMakeLists.txt -@@ -92,16 +92,30 @@ if (DO_PYTHON_BINDINGS) - endif(RUN_SWIG) - - add_library(bindings_python MODULE ${openbabel_SOURCE_DIR}/scripts/python/openbabel-python.cpp) -- target_link_libraries(bindings_python ${PYTHON_LIBRARIES} ${BABEL_LIBRARY}) -+ if(BINDINGS_ONLY) -+ target_link_libraries(bindings_python ${PYTHON_LIBRARIES} ${BABEL_SYSTEM_LIBRARY}) -+ else() -+ target_link_libraries(bindings_python ${PYTHON_LIBRARIES} ${BABEL_LIBRARY}) -+ endif() -+ - if(NOT WIN32) - set_target_properties(bindings_python PROPERTIES - OUTPUT_NAME _openbabel - PREFIX "" - SUFFIX .so ) -- add_dependencies(bindings_python openbabel) -- install(TARGETS bindings_python LIBRARY DESTINATION ${LIB_INSTALL_DIR}) -- install(FILES ${openbabel_SOURCE_DIR}/scripts/python/openbabel.py DESTINATION ${LIB_INSTALL_DIR}) -- install(FILES ${openbabel_SOURCE_DIR}/scripts/python/pybel.py DESTINATION ${LIB_INSTALL_DIR}) -+ if(NOT BINDINGS_ONLY) -+ add_dependencies(bindings_python openbabel) -+ endif() -+ -+ install(TARGETS bindings_python -+ LIBRARY DESTINATION ${LIB_INSTALL_DIR} -+ COMPONENT bindings_python) -+ install(FILES ${openbabel_SOURCE_DIR}/scripts/python/openbabel.py -+ DESTINATION ${LIB_INSTALL_DIR} -+ COMPONENT bindings_python) -+ install(FILES ${openbabel_SOURCE_DIR}/scripts/python/pybel.py -+ DESTINATION ${LIB_INSTALL_DIR} -+ COMPONENT bindings_python) - else(NOT WIN32) - set_target_properties(bindings_python PROPERTIES - OUTPUT_NAME _openbabel -@@ -231,13 +245,25 @@ if (DO_PERL_BINDINGS) - endif (RUN_SWIG) - - add_library(bindings_perl MODULE ${openbabel_SOURCE_DIR}/scripts/perl/openbabel-perl.cpp) -- target_link_libraries(bindings_perl ${PERL_LIBRARY} ${BABEL_LIBRARY} ${PERL_EXTRA_LINK_FLAGS}) -+ if(BINDINGS_ONLY) -+ target_link_libraries(bindings_perl ${PERL_LIBRARY} ${BABEL_SYSTEM_LIBRARY} ${PERL_EXTRA_LINK_FLAGS}) -+ else() -+ target_link_libraries(bindings_perl ${PERL_LIBRARY} ${BABEL_LIBRARY} ${PERL_EXTRA_LINK_FLAGS}) -+ endif() -+ - set_target_properties(bindings_perl PROPERTIES - PREFIX "" - OUTPUT_NAME OpenBabel) -- add_dependencies(bindings_perl openbabel) -- install(TARGETS bindings_perl LIBRARY DESTINATION ${LIB_INSTALL_DIR}) -- install(FILES ${openbabel_SOURCE_DIR}/scripts/perl/OpenBabel.pm DESTINATION ${LIB_INSTALL_DIR}) -+ if(NOT BINDINGS_ONLY) -+ add_dependencies(bindings_perl openbabel) -+ endif() -+ -+ install(TARGETS bindings_perl -+ LIBRARY DESTINATION ${LIB_INSTALL_DIR}/auto/Chemistry/OpenBabel/ -+ COMPONENT bindings_perl) -+ install(FILES ${openbabel_SOURCE_DIR}/scripts/perl/OpenBabel.pm -+ DESTINATION ${LIB_INSTALL_DIR}/Chemistry/ -+ COMPONENT bindings_perl) - - endif (DO_PERL_BINDINGS) - diff --git a/sci-chemistry/openbabel-perl/files/openbabel-perl-2.3.2-trunk_cmake.patch b/sci-chemistry/openbabel-perl/files/openbabel-perl-2.3.2-trunk_cmake.patch deleted file mode 100644 index b72a622a3afb..000000000000 --- a/sci-chemistry/openbabel-perl/files/openbabel-perl-2.3.2-trunk_cmake.patch +++ /dev/null @@ -1,41 +0,0 @@ -diff --git a/scripts/CMakeLists.txt b/scripts/CMakeLists.txt -index e7298ce..16e9000 100644 ---- a/scripts/CMakeLists.txt -+++ b/scripts/CMakeLists.txt -@@ -231,36 +239,6 @@ if (DO_PERL_BINDINGS) - install(TARGETS bindings_perl LIBRARY DESTINATION ${LIB_INSTALL_DIR}) - install(FILES ${openbabel_SOURCE_DIR}/scripts/perl/OpenBabel.pm DESTINATION ${LIB_INSTALL_DIR}) - -- set(PERL_INSTALLDIRS_TEXT "") -- if (OBPERL_INSTALLDIRS) -- set(PERL_INSTALLDIRS_TEXT "INSTALLDIRS=${OBPERL_INSTALLDIRS}") -- endif (OBPERL_INSTALLDIRS) -- -- if (NOT MSVC) -- add_custom_target(pre_bindings_perl ALL -- # Create the scripts/perl directory; we cannot do this inside -- # bindings_perl as the WORKING_DIRECTORY needs to already exist! -- COMMAND ${CMAKE_COMMAND} -E make_directory ${openbabel_BINARY_DIR}/scripts/perl -- ) -- add_custom_target(bindings_perl ALL -- COMMAND ${CMAKE_COMMAND} -E copy ${openbabel_SOURCE_DIR}/scripts/perl/Makefile.PL ${openbabel_BINARY_DIR}/scripts/perl -- COMMAND ${CMAKE_COMMAND} -E copy ${openbabel_SOURCE_DIR}/scripts/perl/OpenBabel.pm ${openbabel_BINARY_DIR}/scripts/perl -- COMMAND ${CMAKE_COMMAND} -E copy ${openbabel_SOURCE_DIR}/scripts/perl/openbabel-perl.cpp ${openbabel_BINARY_DIR}/scripts/perl -- COMMAND PERL5LIB=${openbabel_SOURCE_DIR}/scripts/perl/inc SRC_DIR=${openbabel_SOURCE_DIR} OBJ_DIR=${openbabel_BINARY_DIR} ${PERL_EXECUTABLE} ${openbabel_BINARY_DIR}/scripts/perl/Makefile.PL ${PERL_PREFIX_TEXT} ${PERL_INSTALLDIRS_TEXT} -- COMMAND PERL5LIB=${openbabel_SOURCE_DIR}/scripts/perl/inc make -- DEPENDS openbabel ${openbabel_SOURCE_DIR}/scripts/perl/openbabel-perl.cpp -- WORKING_DIRECTORY ${openbabel_BINARY_DIR}/scripts/perl -- ) -- add_dependencies(bindings_perl pre_bindings_perl openbabel) -- install(CODE "execute_process(COMMAND make install DESTDIR=\$ENV{DESTDIR} WORKING_DIRECTORY ${openbabel_BINARY_DIR}/scripts/perl)") -- -- else (NOT MSVC) -- add_library(bindings_perl MODULE ${openbabel_SOURCE_DIR}/scripts/perl/openbabel-perl.cpp) -- target_link_libraries(bindings_perl ${PERL_LIBRARY} ${BABEL_LIBRARY}) -- set_target_properties(bindings_perl PROPERTIES -- OUTPUT_NAME openbabel_perl ) -- endif(NOT MSVC) -- - endif (DO_PERL_BINDINGS) - - ################### diff --git a/sci-chemistry/openbabel-perl/openbabel-perl-2.3.2.ebuild b/sci-chemistry/openbabel-perl/openbabel-perl-2.3.2.ebuild deleted file mode 100644 index 25a87bc1b7ef..000000000000 --- a/sci-chemistry/openbabel-perl/openbabel-perl-2.3.2.ebuild +++ /dev/null @@ -1,72 +0,0 @@ -# Copyright 1999-2017 Gentoo Foundation -# Distributed under the terms of the GNU General Public License v2 - -EAPI=5 - -inherit cmake-utils eutils perl-module - -DESCRIPTION="Perl bindings for OpenBabel" -HOMEPAGE="http://openbabel.sourceforge.net/" -SRC_URI="mirror://sourceforge/openbabel/openbabel-${PV}.tar.gz" - -KEYWORDS="amd64 ~arm x86 ~amd64-linux ~x86-linux" -SLOT="0" -LICENSE="GPL-2" -IUSE="" - -RDEPEND=" - dev-lang/perl:= - ~sci-chemistry/openbabel-${PV}" -DEPEND="${RDEPEND} - >=dev-util/cmake-2.4.8 - >=dev-lang/swig-2" - -S="${WORKDIR}/openbabel-${PV}" - -PATCHES=( - "${FILESDIR}"/${P}-trunk_cmake.patch - "${FILESDIR}"/${P}-bindings_only.patch - "${FILESDIR}"/${P}-gcc-6_and_7-backport.patch -) - -src_prepare() { - sed \ - -e '/__GNUC__/s:== 4:>= 4:g' \ - -i include/openbabel/shared_ptr.h || die - cmake-utils_src_prepare - perl_set_version -} - -src_configure() { - local mycmakeargs=( - -DCMAKE_INSTALL_RPATH= - -DBINDINGS_ONLY=ON - -DBABEL_SYSTEM_LIBRARY="${EPREFIX}/usr/$(get_libdir)/libopenbabel.so" - -DOB_MODULE_PATH="${EPREFIX}/usr/$(get_libdir)/openbabel/${PV}" - -DLIB_INSTALL_DIR="${D}/${VENDOR_ARCH}" - -DPERL_BINDINGS=ON - -DRUN_SWIG=ON - ) - - cmake-utils_src_configure -} - -src_compile() { - cmake-utils_src_compile bindings_perl -} - -src_test() { - mkdir "${CMAKE_BUILD_DIR}/$(get_libdir)/Chemistry" - cp \ - "${CMAKE_USE_DIR}/scripts/perl/OpenBabel.pm" \ - "${CMAKE_BUILD_DIR}/$(get_libdir)/Chemistry/" - for i in "${CMAKE_USE_DIR}"/scripts/perl/t/*; do - einfo "Running test: ${i}" - perl -I"${CMAKE_BUILD_DIR}/$(get_libdir)" "${i}" || die - done -} - -src_install() { - cd "${CMAKE_BUILD_DIR}" - cmake -DCOMPONENT=bindings_perl -P cmake_install.cmake -} |