proj/gentoo: Initial commit

This commit represents a new era for Gentoo:
Storing the gentoo-x86 tree in Git, as converted from CVS.

This commit is the start of the NEW history.
Any historical data is intended to be grafted onto this point.

Creation process:
1. Take final CVS checkout snapshot
2. Remove ALL ChangeLog* files
3. Transform all Manifests to thin
4. Remove empty Manifests
5. Convert all stale $Header$/$Id$ CVS keywords to non-expanded Git $Id$
5.1. Do not touch files with -kb/-ko keyword flags.

Signed-off-by: Robin H. Johnson <robbat2@gentoo.org>
X-Thanks: Alec Warner <antarus@gentoo.org> - did the GSoC 2006 migration tests
X-Thanks: Robin H. Johnson <robbat2@gentoo.org> - infra guy, herding this project
X-Thanks: Nguyen Thai Ngoc Duy <pclouds@gentoo.org> - Former Gentoo developer, wrote Git features for the migration
X-Thanks: Brian Harring <ferringb@gentoo.org> - wrote much python to improve cvs2svn
X-Thanks: Rich Freeman <rich0@gentoo.org> - validation scripts
X-Thanks: Patrick Lauer <patrick@gentoo.org> - Gentoo dev, running new 2014 work in migration
X-Thanks: Michał Górny <mgorny@gentoo.org> - scripts, QA, nagging
X-Thanks: All of other Gentoo developers - many ideas and lots of paint on the bikeshed

1 files changed, 99 insertions, 0 deletions

diff --git a/sci-chemistry/azara/azara-2.8-r5.ebuild b/sci-chemistry/azara/azara-2.8-r5.ebuild
new file mode 100644
index 000000000000..4b90f2ccbd2b
--- /dev/null
+++ b/sci-chemistry/azara/azara-2.8-r5.ebuild
@@ -0,0 +1,99 @@
+# Copyright 1999-2015 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Id$
+
+EAPI=5
+
+PYTHON_COMPAT=( python2_7 )
+
+inherit eutils python-r1 toolchain-funcs
+
+DESCRIPTION="A suite of programmes to process and view NMR data"
+HOMEPAGE="http://www.bio.cam.ac.uk/azara/"
+SRC_URI="http://www.bio.cam.ac.uk/ccpn/download/${PN}/${P}-src.tgz"
+
+LICENSE="AZARA"
+SLOT="0"
+KEYWORDS="~amd64 ~x86 ~amd64-linux"
+IUSE="xpm X"
+
+RDEPEND="
+	x11-libs/libX11
+	x11-libs/motif:0
+	xpm? ( x11-libs/libXpm )"
+DEPEND="${RDEPEND}"
+
+src_prepare() {
+	cat > ENVIRONMENT <<- EOF
+	CC=$(tc-getCC)
+	CFLAGS = ${CFLAGS}
+	LFLAGS = ${LDFLAGS}
+	MATH_LIB = -lm
+	X11_INCLUDE_DIR = -I"${EPREFIX}/usr/X11R6/include"
+	MOTIF_INCLUDE_DIR = -I"${EPREFIX}/usr/include" -I../global
+	X11_LIB_DIR = -L"${EPREFIX}/usr/$(get_libdir)"
+	MOTIF_LIB_DIR = -L"${EPREFIX}/usr/$(get_libdir)"
+	X11_LIB = -lX11
+	MOTIF_LIB = -lXm -lXt
+	SHARED_FLAGS = -shared
+	ENDIAN_FLAG = -DBIG_ENDIAN_DATA -DWRITE_ENDIAN_PAR
+	PIC = -fPIC
+	EOF
+
+	use xpm && echo "XPMUSE=\"XPM_FLAG=-DUSE_XPM XPM_LIB=-lXpm\"" >> ENVIRONMENT
+
+	epatch \
+		"${FILESDIR}"/${PV}-prll.patch \
+		"${FILESDIR}"/${PV}-impl-dec.patch \
+		"${FILESDIR}"/${PV}-python.patch \
+		"${FILESDIR}"/${PV}-64bit.patch
+}
+
+src_compile() {
+	local mymake
+	local makeflags
+
+	mymake="${mymake} help nongui"
+	use X && mymake="${mymake} gui"
+
+	emake ${mymake}
+
+	compilation() {
+		python_export PYTHON_CFLAGS PYTHON_LIBS
+		cd "${BUILD_DIR}" || die
+		emake DataRows_clean
+		emake \
+			PYTHON_INCLUDE_DIR="${PYTHON_CFLAGS}" \
+			PYTHON_LIB="${PYTHON_LIBS}" \
+			DataRows
+	}
+	python_copy_sources
+	python_foreach_impl compilation
+}
+
+src_install() {
+	rm bin/pythonAzara || die
+	if ! use X; then
+		rm bin/plot* || die
+	fi
+
+	dodoc CHANGES* README*
+	dohtml -r html/*
+
+	cd bin || die
+	dobin ${PN}
+	rm ${PN} || die
+	for bin in *; do
+		newbin ${bin} ${bin}-${PN}
+	done
+
+	installation() {
+		cd "${BUILD_DIR}" || die
+		python_domodule lib/DataRows.so
+	}
+	python_foreach_impl installation
+}
+
+pkg_postinst() {
+	einfo "Due to collision we moved all binary to *-${PN}"
+}