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authorPacho Ramos <pacho@gentoo.org>2023-10-19 16:54:11 +0200
committerPacho Ramos <pacho@gentoo.org>2023-10-19 16:54:18 +0200
commitadf08d70bad8ab6b9ad3cbae8429ae5cff35f78b (patch)
treee7c6fca18d1e66c59534d6dc85e697f6e6cd0bc2 /sci-biology
parentgames-puzzle/gnome-sudoku: Version bump to 45.1 (diff)
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sci-biology/stride: add 20060723
Update upstream sources location and rebase our patch Closes: https://bugs.gentoo.org/912948 Signed-off-by: Pacho Ramos <pacho@gentoo.org>
Diffstat (limited to 'sci-biology')
-rw-r--r--sci-biology/stride/Manifest2
-rw-r--r--sci-biology/stride/stride-20060723.ebuild35
2 files changed, 37 insertions, 0 deletions
diff --git a/sci-biology/stride/Manifest b/sci-biology/stride/Manifest
index 8d9e9236f0cc..bfd0e48635ba 100644
--- a/sci-biology/stride/Manifest
+++ b/sci-biology/stride/Manifest
@@ -1,2 +1,4 @@
DIST stride-20011129.tar.gz 56441 BLAKE2B 4d4cd3f9f6cef997fff10571aecb70cb21056e88c5130e7dfdafe15a6fb353656d0635b4d65895ef115479a87dcf600b659455d15460344c838543a2e356bfae SHA512 cbd40fce4684728f363520540132fc1a0003126954a145d59aeff48adb20fdaa66520bd12b56ee5d2906e8ea97bf78a225204105b820f7f368aee5e790a6471b
+DIST stride-20030408.tar.gz 318997 BLAKE2B 0a6fbb7da0a18cc9fbc4beb3214488080e5f6b85b93f87a33f3d6c38385da12707ee0eb2a10a86c9f6dd3884bd043e3f7f36c6aac797da7dc4f351fab047a950 SHA512 50d71c053118ca078dd9a4659d9b0f62d1f1101519e01b258a088e229ad2062bec917160c7794f18c96d982992d5571f93508365ff4f6e76438da8183390b498
+DIST stride-20060723-update-r1.patch.xz 5888 BLAKE2B 6f477787004fd962b2faf5f0dd1a497067608eb8fcc5d16e161d918ecff7a6b86184eeb5f97ece4465d7595dd64fd0958a6bcedb76f2b666bdc4d0947e51eda0 SHA512 5ecaa5c262856009e188c00a9cf75765fcd7988ebe3cf0389101a4c281fdbc8d085a024fa78b6c88916528d1158133873ebf38a070a66b7e76f842586646ba2d
DIST stride-20060723-update.patch.bz2 5621 BLAKE2B 266a7371c0963a996430c1f809b46196e8bf179fcf2afb4380f6eccd092c03b29d5b09b8a8438ee7848d0f411920db2e4465ef646c75a406197412f35e880179 SHA512 e06eb68b907615e12dc1a9981be157400e9ffed9391a906cb4eb3ef4067b7027c26cc600298053bfc5d2bbbebbbfefe0e6b18d0e4f6fef2172768e6f95498af1
diff --git a/sci-biology/stride/stride-20060723.ebuild b/sci-biology/stride/stride-20060723.ebuild
new file mode 100644
index 000000000000..007a2688b0f7
--- /dev/null
+++ b/sci-biology/stride/stride-20060723.ebuild
@@ -0,0 +1,35 @@
+# Copyright 1999-2023 Gentoo Authors
+# Distributed under the terms of the GNU General Public License v2
+
+EAPI=8
+inherit toolchain-funcs
+
+DESCRIPTION="Protein secondary structure assignment from atomic coordinates"
+HOMEPAGE="http://webclu.bio.wzw.tum.de/stride/"
+# Version 20030408 per dates in upstream tarball
+UPSTREAM_VER="20030408"
+SRC_URI="https://webclu.bio.wzw.tum.de/stride/${PN}.tar.gz -> ${PN}-${UPSTREAM_VER}.tar.gz
+ https://dev.gentoo.org/~pacho/${PN}/${PN}-20060723-update-r1.patch.xz"
+
+LICENSE="STRIDE"
+SLOT="0"
+KEYWORDS="~amd64 ~ppc ~x86 ~amd64-linux ~x86-linux"
+RESTRICT="mirror bindist"
+
+S="${WORKDIR}"
+PATCHES=(
+ # This patch updates the source to the most recent
+ # version which was kindly provided by the author
+ "${S}"/${P}-update-r1.patch
+
+ "${FILESDIR}"/${PN}-20011129-fix-buildsystem.patch
+ "${FILESDIR}"/${PN}-20011129-clang16.patch
+)
+
+src_configure() {
+ tc-export CC
+}
+
+src_install() {
+ dobin ${PN}
+}