summaryrefslogtreecommitdiff
diff options
context:
space:
mode:
authorPacho Ramos <pacho@gentoo.org>2016-11-27 13:39:20 +0100
committerPacho Ramos <pacho@gentoo.org>2016-11-27 13:43:50 +0100
commitb31cfe0f987401c87a608ee37f57158f70c071e0 (patch)
treee506c904e32bd85114f107953831fc96c86dd63e /sci-biology/gmap
parentsci-biology/bedtools: This needs slot 0 of samtools (#597982) (diff)
downloadgentoo-b31cfe0f987401c87a608ee37f57158f70c071e0.tar.gz
gentoo-b31cfe0f987401c87a608ee37f57158f70c071e0.tar.bz2
gentoo-b31cfe0f987401c87a608ee37f57158f70c071e0.zip
sci-biology/gmap: Drop old (#597984)
Package-Manager: portage-2.3.2
Diffstat (limited to 'sci-biology/gmap')
-rw-r--r--sci-biology/gmap/Manifest2
-rw-r--r--sci-biology/gmap/gmap-2011.10.07.ebuild36
-rw-r--r--sci-biology/gmap/gmap-2012.07.20.ebuild36
3 files changed, 0 insertions, 74 deletions
diff --git a/sci-biology/gmap/Manifest b/sci-biology/gmap/Manifest
index b31c4412a1c3..e0e1c1064243 100644
--- a/sci-biology/gmap/Manifest
+++ b/sci-biology/gmap/Manifest
@@ -1,3 +1 @@
-DIST gmap-gsnap-2011-10-07.tar.gz 3404351 SHA256 e508009592d5dd3442345dc5ce6fd9930366e008efa32e4c72dc243a495f3f20 SHA512 6546be4da41c45e41bdab71dcda69cbf172bc186ca64a2543461eb050f383641a13fea0cfcc6bb76b87cc4faa4c593944b029ee1ca2ba68dbaf7d939d0bf02e1 WHIRLPOOL 9f5cd62fb9cbb2cc73d6b971f29d8816e67e1b4b1b9906d8b06ddf99ffd9356bcdf19869066fb14ca5d3ad93a3b70527d05237be2f438da4db86898103bd2bf2
-DIST gmap-gsnap-2012-07-20.tar.gz 3623122 SHA256 4cd0c0a313cb7a35b8c7afd45b545e6062b343739f9ef522a09001d448aeb5ec SHA512 bbc22509fc63814a102f96ce0da6a1119c78de7fc2fc4fe17cc4d97881313a77818eaedc51bb6d4ce2426560925fe5ffa121acf972d7b3b097e8d3d65efb7b95 WHIRLPOOL 7318377e4cf80db5c5a9495bf68653fbc48051d6fa5748ed796e18888b6e20215d2714b753358fb4cc97aa9c8e441d53ef616ded6ee0923fe78312e78ee91e82
DIST gmap-gsnap-2015-12-31.v5.tar.gz 4169874 SHA256 2317ba63578ba87f534689c0bf6930a9b177df4aa8a75b2a82f2118760ff3037 SHA512 d42623c60c298d9d3009893432f3eef8cb764bf7cf26b42e6a95b27a468fffab20c8307597c4c8e1afdd61f35652246568c3162137ce59fc4850aaab1062bb48 WHIRLPOOL 2571b7d6a7bddf11b4cbaec22377af19a84633f7d8fe9de74b4c2fa12e0480a76df9a1f52b44199021aa05f6d846ef98d8fbb6f978e64f5b452bbaaafbdd6974
diff --git a/sci-biology/gmap/gmap-2011.10.07.ebuild b/sci-biology/gmap/gmap-2011.10.07.ebuild
deleted file mode 100644
index fb20296c2654..000000000000
--- a/sci-biology/gmap/gmap-2011.10.07.ebuild
+++ /dev/null
@@ -1,36 +0,0 @@
-# Copyright 1999-2011 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Id$
-
-EAPI="2"
-
-MY_PV=${PV//./-}
-
-DESCRIPTION="A Genomic Mapping and Alignment Program for mRNA and EST Sequences"
-HOMEPAGE="http://www.gene.com/share/gmap/"
-SRC_URI="http://research-pub.gene.com/gmap/src/gmap-gsnap-${MY_PV}.tar.gz"
-
-LICENSE="gmap"
-SLOT="0"
-IUSE="+samtools +goby"
-KEYWORDS="~amd64 ~x86"
-
-DEPEND="samtools? ( sci-biology/samtools )
- goby? ( sci-biology/goby-cpp )"
-RDEPEND="${DEPEND}"
-
-S="${WORKDIR}/gmap-${MY_PV}"
-
-src_configure() {
- econf $(use_with samtools) \
- $(use_with goby goby /usr)
-}
-
-src_install() {
- einstall || die
- dodoc AUTHORS ChangeLog README
-}
-
-src_test() {
- emake check || die
-}
diff --git a/sci-biology/gmap/gmap-2012.07.20.ebuild b/sci-biology/gmap/gmap-2012.07.20.ebuild
deleted file mode 100644
index cd20c09b57f8..000000000000
--- a/sci-biology/gmap/gmap-2012.07.20.ebuild
+++ /dev/null
@@ -1,36 +0,0 @@
-# Copyright 1999-2012 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Id$
-
-EAPI=4
-
-MY_PV=${PV//./-}
-
-DESCRIPTION="A Genomic Mapping and Alignment Program for mRNA and EST Sequences"
-HOMEPAGE="http://research-pub.gene.com/gmap/"
-SRC_URI="http://research-pub.gene.com/gmap/src/gmap-gsnap-${MY_PV}.tar.gz"
-
-LICENSE="gmap"
-SLOT="0"
-IUSE="+samtools +goby"
-KEYWORDS="~amd64 ~x86"
-
-DEPEND="samtools? ( sci-biology/samtools )
- goby? ( sci-biology/goby-cpp )"
-RDEPEND="${DEPEND}"
-
-S="${WORKDIR}/gmap-${MY_PV}"
-
-src_configure() {
- econf $(use_with samtools) \
- $(use_with goby goby /usr)
-}
-
-src_install() {
- einstall || die
- dodoc AUTHORS ChangeLog README
-}
-
-src_test() {
- emake check || die
-}