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author | Michał Górny <mgorny@gentoo.org> | 2021-10-17 21:50:21 +0200 |
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committer | Michał Górny <mgorny@gentoo.org> | 2021-10-17 23:15:09 +0200 |
commit | 172dfd29ebd308cd3f56d2255690668599943450 (patch) | |
tree | d21331d9eb4958758f817facb67973c9c5ddcc59 | |
parent | dev-python/marshmallow: Bump to 3.14.0 (diff) | |
download | gentoo-172dfd29ebd308cd3f56d2255690668599943450.tar.gz gentoo-172dfd29ebd308cd3f56d2255690668599943450.tar.bz2 gentoo-172dfd29ebd308cd3f56d2255690668599943450.zip |
dev-python/pandas: Bump to 1.3.4
Signed-off-by: Michał Górny <mgorny@gentoo.org>
-rw-r--r-- | dev-python/pandas/Manifest | 1 | ||||
-rw-r--r-- | dev-python/pandas/pandas-1.3.4.ebuild | 192 |
2 files changed, 193 insertions, 0 deletions
diff --git a/dev-python/pandas/Manifest b/dev-python/pandas/Manifest index 9ee16d550922..c3ef0bab1820 100644 --- a/dev-python/pandas/Manifest +++ b/dev-python/pandas/Manifest @@ -5,3 +5,4 @@ DIST pandas-1.3.0.tar.gz 4721119 BLAKE2B f09eedd848686597a755da929683e841be61cce DIST pandas-1.3.1.tar.gz 4724471 BLAKE2B 3c645927d25ba5cfd8f2822f07752149cc4a33c0b3b32d1f45986397b877b338a5287170281231058c37e2930152a6bd5f3f50fddf32805f05de49150abd6dd6 SHA512 ec57d123038cd4018dbfbe2da2d10211d507cdbaa849f4752c5770d017c55cf1d2c4b29f7c86e480695205e95622b28cd75319338644302732eb4ac9efef6993 DIST pandas-1.3.2.tar.gz 4727155 BLAKE2B 0d667a70a4f45d47677af9d9f18ef5bcaad7d52fe780fa0646fbdcedaf426ef6a3ea768886b85a4051419d5965fe316c6162d770297e5dc679234ad99d22908b SHA512 5ba8b7c7f048e13f2493235b941ada34f9416777405fae4040688f88d004564aa6c8eddfb0dc5a78e97e8370a0293a75ba63704fea4e25bc5b003a619016a9c1 DIST pandas-1.3.3.tar.gz 4730758 BLAKE2B 0ef945b2181329265b93fbdb7f9c35497ef847508cc2166b6e2a12ad1a2faa3940d5c8f375754ec34db4e236934a1f903f1e58e6882c6de0018a16b38f50f136 SHA512 a3a871a9954c7249311b9904e588d85fba4d6aa07463308b08b789b93a1eb63e36dac1b0d4254a5379085c05c5633ef31b615d0c60963c796dd7a33d815a5534 +DIST pandas-1.3.4.tar.gz 4734599 BLAKE2B a71b5b57198defcf4f6d848f445c7112668994f089b62a6bce1028ab4ba8a9bf3adc3c393699332fb0c76818ed80164843114e68e57232c495cee03ec5e88009 SHA512 c821365b1f06d69c61b957c4768a5f86b39d97d74b0732ea0eaade9d21bca8f652e38f91f83adf2fc6488f227c75d4e5e64e8f131456e7f0a93ecfcf237190a6 diff --git a/dev-python/pandas/pandas-1.3.4.ebuild b/dev-python/pandas/pandas-1.3.4.ebuild new file mode 100644 index 000000000000..4c3b594f00c9 --- /dev/null +++ b/dev-python/pandas/pandas-1.3.4.ebuild @@ -0,0 +1,192 @@ +# Copyright 1999-2021 Gentoo Authors +# Distributed under the terms of the GNU General Public License v2 + +EAPI=8 + +PYTHON_COMPAT=( python3_{8..10} ) +PYTHON_REQ_USE="threads(+)" + +VIRTUALX_REQUIRED="manual" + +inherit distutils-r1 multiprocessing optfeature virtualx + +DESCRIPTION="Powerful data structures for data analysis and statistics" +HOMEPAGE="https://pandas.pydata.org/ https://github.com/pandas-dev/pandas/" +SRC_URI=" + https://github.com/pandas-dev/pandas/releases/download/v${PV}/${P}.tar.gz" +S="${WORKDIR}/${P/_/}" + +SLOT="0" +LICENSE="BSD" +KEYWORDS="~amd64 ~arm ~arm64 ~ppc ~ppc64 ~riscv ~s390 ~x86" +IUSE="doc full-support minimal test X" +RESTRICT="!test? ( test )" + +RECOMMENDED_DEPEND=" + >=dev-python/bottleneck-1.2.1[${PYTHON_USEDEP}] + >=dev-python/numexpr-2.7.0[${PYTHON_USEDEP}] +" + +# TODO: add pandas-gbq to the tree +OPTIONAL_DEPEND=" + dev-python/beautifulsoup4[${PYTHON_USEDEP}] + dev-python/blosc[${PYTHON_USEDEP}] + || ( + dev-python/html5lib[${PYTHON_USEDEP}] + dev-python/lxml[${PYTHON_USEDEP}] + ) + dev-python/jinja[${PYTHON_USEDEP}] + dev-python/matplotlib[${PYTHON_USEDEP}] + || ( + dev-python/openpyxl[${PYTHON_USEDEP}] + dev-python/xlsxwriter[${PYTHON_USEDEP}] + ) + >=dev-python/pytables-3.2.1[${PYTHON_USEDEP}] + dev-python/statsmodels[${PYTHON_USEDEP}] + >=dev-python/xarray-0.12.3[${PYTHON_USEDEP}] + >=dev-python/sqlalchemy-1.3.0[${PYTHON_USEDEP}] + >=dev-python/xlrd-1.2.0[${PYTHON_USEDEP}] + >=dev-python/xlwt-1.3.0[${PYTHON_USEDEP}] + >=dev-python/scipy-1.1[${PYTHON_USEDEP}] + X? ( + || ( + dev-python/PyQt5[${PYTHON_USEDEP}] + x11-misc/xclip + x11-misc/xsel + ) + ) +" +COMMON_DEPEND=" + >=dev-python/numpy-1.17.3[${PYTHON_USEDEP}] + >=dev-python/python-dateutil-2.8.1-r3[${PYTHON_USEDEP}] + >=dev-python/pytz-2017.3[${PYTHON_USEDEP}] +" +DEPEND="${COMMON_DEPEND} + >=dev-python/cython-0.29.21[${PYTHON_USEDEP}] + doc? ( + ${VIRTUALX_DEPEND} + app-text/pandoc + dev-python/beautifulsoup4[${PYTHON_USEDEP}] + dev-python/html5lib[${PYTHON_USEDEP}] + dev-python/ipython[${PYTHON_USEDEP}] + dev-python/lxml[${PYTHON_USEDEP}] + dev-python/matplotlib[${PYTHON_USEDEP}] + dev-python/nbsphinx[${PYTHON_USEDEP}] + >=dev-python/numpydoc-0.9.1[${PYTHON_USEDEP}] + >=dev-python/openpyxl-1.6.1[${PYTHON_USEDEP}] + >=dev-python/pytables-3.0.0[${PYTHON_USEDEP}] + dev-python/pytz[${PYTHON_USEDEP}] + dev-python/rpy[${PYTHON_USEDEP}] + dev-python/sphinx[${PYTHON_USEDEP}] + dev-python/xlrd[${PYTHON_USEDEP}] + dev-python/xlwt[${PYTHON_USEDEP}] + dev-python/scipy[${PYTHON_USEDEP}] + x11-misc/xclip + ) + test? ( + ${VIRTUALX_DEPEND} + ${RECOMMENDED_DEPEND} + ${OPTIONAL_DEPEND} + dev-python/beautifulsoup4[${PYTHON_USEDEP}] + dev-python/hypothesis[${PYTHON_USEDEP}] + dev-python/openpyxl[${PYTHON_USEDEP}] + dev-python/pymysql[${PYTHON_USEDEP}] + >=dev-python/pytest-6[${PYTHON_USEDEP}] + dev-python/pytest-xdist[${PYTHON_USEDEP}] + dev-python/psycopg:2[${PYTHON_USEDEP}] + dev-python/xlsxwriter[${PYTHON_USEDEP}] + x11-misc/xclip + x11-misc/xsel + ) +" +# dev-python/statsmodels invokes a circular dep +# hence rm from doc? ( ), again +RDEPEND="${COMMON_DEPEND} + !minimal? ( ${RECOMMENDED_DEPEND} ) + full-support? ( ${OPTIONAL_DEPEND} ) +" + +python_prepare_all() { + # Prevent un-needed download during build + sed -e "/^ 'sphinx.ext.intersphinx',/d" \ + -i doc/source/conf.py || die + + # requires package installed + sed -e '/extra_compile_args =/s:"-Werror"::' \ + -i setup.py || die + + distutils-r1_python_prepare_all +} + +python_compile() { + distutils-r1_python_compile -j1 +} + +python_compile_all() { + # To build docs the need be located in $BUILD_DIR, + # else PYTHONPATH points to unusable modules. + if use doc; then + cd "${BUILD_DIR}"/lib || die + cp -ar "${S}"/doc . && cd doc || die + LANG=C PYTHONPATH=. virtx ${EPYTHON} make.py html + fi +} + +python_test() { + local deselect=( + # test for rounding errors, fails if we have better precision + # e.g. on amd64 with FMA or on arm64 + # https://github.com/pandas-dev/pandas/issues/38921 + pandas/tests/window/test_rolling.py::test_rolling_var_numerical_issues + + # weird issue, doesn't seem very important + 'pandas/tests/base/test_misc.py::test_memory_usage[series-with-empty-index]' + + # old psycopg2 API + pandas/tests/tools/test_to_datetime.py::TestToDatetime::test_to_datetime_tz_psycopg2 + + # Internet + pandas/tests/io/xml/test_xml.py::test_wrong_url + + # TODO: some data path problems? + pandas/tests/io/test_fsspec.py::test_read_csv + pandas/tests/io/test_fsspec.py::test_markdown_options + ) + + local -x LC_ALL=C.UTF-8 + pushd "${BUILD_DIR}"/lib > /dev/null || die + "${EPYTHON}" -c "import pandas; pandas.show_versions()" || die + PYTHONPATH=. virtx epytest pandas --skip-slow --skip-network \ + ${deselect[@]/#/--deselect } -m "not single" \ + -n "$(makeopts_jobs "${MAKEOPTS}" "$(get_nproc)")" + find . '(' -name .pytest_cache -o -name .hypothesis ')' \ + -exec rm -r {} + || die + popd > /dev/null || die +} + +python_install_all() { + if use doc; then + dodoc -r "${BUILD_DIR}"/lib/doc/build/html + einfo "An initial build of docs is absent of references to statsmodels" + einfo "due to circular dependency. To have them included, emerge" + einfo "statsmodels next and re-emerge pandas with USE doc" + fi + + distutils-r1_python_install_all +} + +pkg_postinst() { + optfeature "accelerating certain types of NaN evaluations, using specialized cython routines to achieve large speedups." dev-python/bottleneck + optfeature "accelerating certain numerical operations, using multiple cores as well as smart chunking and caching to achieve large speedups" ">=dev-python/numexpr-2.1" + optfeature "needed for pandas.io.html.read_html" dev-python/beautifulsoup4 dev-python/html5lib dev-python/lxml + optfeature "for msgpack compression using blosc" dev-python/blosc + optfeature "Template engine for conditional HTML formatting" dev-python/jinja + optfeature "Plotting support" dev-python/matplotlib + optfeature "Needed for Excel I/O" ">=dev-python/openpyxl-3.0.0" dev-python/xlsxwriter dev-python/xlrd dev-python/xlwt + optfeature "necessary for HDF5-based storage" ">=dev-python/pytables-3.2.1" + optfeature "R I/O support" dev-python/rpy + optfeature "Needed for parts of pandas.stats" dev-python/statsmodels + optfeature "SQL database support" ">=dev-python/sqlalchemy-1.3.0" + optfeature "miscellaneous statistical functions" dev-python/scipy + optfeature "necessary to use pandas.io.clipboard.read_clipboard support" dev-python/PyQt5 dev-python/pygtk x11-misc/xclip x11-misc/xsel +} |