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* sci-biology/cufflinks: Drop debugging flags, fix compatibility with newer sam...Justin Lecher2014-10-025-16/+120
* sci-biology/rebase: Version BUmpJustin Lecher2014-09-303-24/+55
* sci-biology/cufflinks: Version BUmpJustin Lecher2014-09-253-16/+62
* sci-biology/cufflinks: Fix dep due to uncompatible samtools releaseJustin Lecher2014-09-253-13/+25
* sci-biology/samtools: Install bam headers and create libbam.so, #523644Justin Lecher2014-09-254-16/+156
* sci-biology/samtools: Add missing build dep, #523586Justin Lecher2014-09-243-21/+25
* sci-biology/plink: Rename USE lapack -> blas, fixing build problems, #514106Justin Lecher2014-09-223-23/+29
* sci-biology/samtools: Version Bump, #523224; drop oldJustin Lecher2014-09-207-169/+104
* sci-biology/vienna-rna: Version Bump, #522850Justin Lecher2014-09-154-9/+152
* sci-biology/rebase: Drop ebuild with deprecated EAPIJustin Lecher2014-09-153-71/+19
* sci-biology/rebase: Version BumpJustin Lecher2014-09-153-17/+72
* ppc stable wrt bug #520776; Drop old.Mikle Kolyada2014-08-294-119/+14
* Stable on amd64 and x86, wrt bug #520776Sergey Popov2014-08-293-12/+15
* QA: move AUTOTOOLS_IN_SOURCE_BUILD definition beforce inheriting autotools ec...Sergey Popov2014-08-293-23/+20
* bumped EAPI to 5 to support dev-lang/perl upgradesIan Stakenvicius2014-08-273-11/+17
* QA: drop trailing '.' from DESCRIPTIONSergei Trofimovich2014-08-108-29/+33
* Bump to EAPI=5 (bug #478714)Mikle Kolyada2014-08-0920-90/+99
* Stable for ppc, wrt bug #512118Agostino Sarubbo2014-08-033-23/+23
* sci-biology/rebase: Version BumpJustin Lecher2014-07-313-17/+72
* Non-maintainer commit. Update to use virtual/mysql wrt bug 508802Brian Evans2014-07-306-23/+30
* x86 stable wrt bug #512118Paweł Hajdan2014-07-273-12/+21
* Stable for amd64 wrt bug #512118José María Alonso2014-07-173-22/+17
* version bump; license changed, is slightly more lax nowIan Stakenvicius2014-07-163-7/+98
* Bump to EAPI=5Mikle Kolyada2014-07-153-13/+17
* Depend on virtual/perl-x instead of perl-core/xAndreas Hüttel2014-07-103-12/+27
* Remove oldAndreas Hüttel2014-07-093-40/+23
* sci-biology/infernal: Add patch as binary to prevent CVS magics, #431076Justin Lecher2014-07-064-29/+54
* sci-biology/abyss: Add missing dep on boost, #515156Justin Lecher2014-07-063-26/+10
* sci-biology/ncbi-tools++ removal. This version doesn't build with gnutls-3. S...Manuel Rüger2014-06-3010-1173/+0
* Convert to distutils-r1. Depend on setuptools.Mike Gilbert2014-06-304-29/+39
* sci-biology/rebase: Version BUmp, fixes broken snapshot, #512286Justin Lecher2014-06-043-5/+33
* sci-biology/biopython: Version Bump, thanks Martin Mokrejs <mmokrejs@fold.nat...Justin Lecher2014-06-033-16/+71
* sci-biology/rebase: Version BUmp; clean oldJustin Lecher2014-06-027-227/+13
* Add bedtools 2.20.1 thanks to Martin Mokrejs (bug #505538)Sven Vermeulen2014-05-303-5/+55
* sci-biology/plink: Version BUmp, #510716Justin Lecher2014-05-194-41/+84
* sci-biology/update-blastdb: Fix typoJustin Lecher2014-05-193-19/+22
* sci-biology/psipred: Add additional dep on sci-biology/update-blastJustin Lecher2014-05-148-39/+44
* sci-biology/ncbi-tools++: Block sci-biology/update-blastdbJustin Lecher2014-05-143-11/+28
* sci-biology/update-blastdb: New addition, written by meJustin Lecher2014-05-143-2/+58
* sci-biology/update-blastdb: New addition, written by meJustin Lecher2014-05-142-0/+14
* Remove ruby18 target.Manuel Rüger2014-05-074-11/+15
* sci-biology/biopython: Import changes from sci overlayJustin Lecher2014-05-075-15/+119
* sci-biology/profphd: Fix for newer perl, version BumpJustin Lecher2014-04-245-10/+88
* Fix LICENSE, add mirror and bindist restrictions, update SRC_URI, bug 470778.Ulrich Müller2014-04-173-15/+25
* sci-biology/psipred: Version BumpJustin Lecher2014-04-073-16/+81
* New e-mail address.Jeroen Roovers2014-03-243-21/+12
* sci-biology/samtools: Fix symlink creation, thanks Martin Mokrejs telling me ...Justin Lecher2014-03-233-15/+11
* sci-biology/rebase: Version BumpJustin Lecher2014-03-063-3/+78
* sci-biology/tophat: Version Bump, #502532; thanks José María Fernández Go...Justin Lecher2014-03-064-8/+185
* Reference correct library name on Darwin, thanks Linlin Yan in bug #491812Fabian Groffen2014-02-113-24/+16