diff options
Diffstat (limited to 'dev-lang/R')
| -rw-r--r-- | dev-lang/R/ChangeLog | 7 | ||||
| -rw-r--r-- | dev-lang/R/Manifest | 4 | ||||
| -rw-r--r-- | dev-lang/R/R-2.15.1.ebuild | 173 |
3 files changed, 182 insertions, 2 deletions
diff --git a/dev-lang/R/ChangeLog b/dev-lang/R/ChangeLog index a4cea293aa67..f3b7368581e2 100644 --- a/dev-lang/R/ChangeLog +++ b/dev-lang/R/ChangeLog @@ -1,6 +1,11 @@ # ChangeLog for dev-lang/R # Copyright 1999-2012 Gentoo Foundation; Distributed under the GPL v2 -# $Header: /var/cvsroot/gentoo-x86/dev-lang/R/ChangeLog,v 1.203 2012/06/22 15:50:57 calchan Exp $ +# $Header: /var/cvsroot/gentoo-x86/dev-lang/R/ChangeLog,v 1.204 2012/06/29 00:30:17 calchan Exp $ + +*R-2.15.1 (29 Jun 2012) + + 29 Jun 2012; Denis Dupeyron <calchan@gentoo.org> +R-2.15.1.ebuild: + Version bump. 22 Jun 2012; Denis Dupeyron <calchan@gentoo.org> R-2.15.0.ebuild: Removed debugging code which stayed behind by mistake. Many thanks to Gabriel diff --git a/dev-lang/R/Manifest b/dev-lang/R/Manifest index 97d5709e4ea0..583828915528 100644 --- a/dev-lang/R/Manifest +++ b/dev-lang/R/Manifest @@ -11,11 +11,13 @@ DIST R-2.10.1.tar.gz 19705604 RMD160 7acf060192f205da4731d0ea3c2cc318b65b7e91 SH DIST R-2.14.1.tar.gz 23697861 RMD160 9dcd1d135701e3c682585346e7c48ac2c62012fd SHA1 5803a213480a749e36bccc155aecb13070ade096 SHA256 d8a18914005975f40ed8fb37e3532422f769fb454651a9ed75f73c2bee9c0c4c DIST R-2.14.2.tar.gz 23893986 RMD160 6055dd28a99baa7b23c55f74dc1479e93a0dee58 SHA1 523dca7694e4d0c8701fcc783ea3767e46fe7a62 SHA256 ccd8b43a746dc7105a1c77423ea1bb72dc333b41d9e9801a96d6f71c2266736e DIST R-2.15.0.tar.gz 24195517 RMD160 eef2b98441469b21aff9b013986c89c3c57908b0 SHA1 a633f87fdbd22e8c371971c535ca815e63c297f6 SHA256 6f26304773e92d8b61f150e1ccd21c153a32b89e8032b1ece45e5f4c34d9e397 +DIST R-2.15.1.tar.gz 24592493 RMD160 84a010906424f3e84b84a71236424a8f2bf1df08 SHA1 f0e6912be6dfc0d1fdc4be66048304d8befe8424 SHA256 96e4baea9dc7653b9160d7f2e1d321d0f252fee37ceb4273d4c94f0d4d815485 DIST R-20120306.bash_completion.bz2 4325 RMD160 2cc48e78a067f4cd4e92dec5119d11a93f691baf SHA1 6a0022d62b86986471ee114f4d7fcd159d16952f SHA256 63003bcad2c35edc5e3329b72f85aaa0b8843b9ec424dc015b50212976372c3f DIST R.bash_completion.bz2 4019 RMD160 796951fb32e9ea4074dcd5ba3da5955ec0193993 SHA1 05ddebef0df16f0bf35aecc8fcb702ad5d106e5e SHA256 424790f7be27a0aad7b65289c97cb15d2ca9ee272f30f3e5c906217e487c7f85 EBUILD R-2.10.1.ebuild 4525 RMD160 fb0226c2a3521698f71e460832552e0b6f58ad98 SHA1 490b0bc3731330e389cbe8bdcb54b894bd830b9c SHA256 9d02913f707accb1a91a07704b118cdd6376af0ed1f661d8038af7eab6cdae4a EBUILD R-2.14.1.ebuild 4334 RMD160 b85c8c99869c40b793b9b82352cb9cf16047366b SHA1 65b9e8c63ebbfd2d1302a397d2e7b7049fdbc436 SHA256 4caa551320de5ea8b8e0acf252eb54cb502862dcc993dab5e2d63899e11461f8 EBUILD R-2.14.2.ebuild 4421 RMD160 1902a7206c803fb3e09e3b6417e0fd865a1f6784 SHA1 1cb666269bd92e0f4acd79cb93b5556512c50675 SHA256 235ba61fc1f0e6c4062d971381426538119d476ac016a093f0b4e176028e7175 EBUILD R-2.15.0.ebuild 5238 RMD160 1ff0663ccffb7b347d062c5a47d8831764365111 SHA1 9c769f33074d23f17d21d66cc2a419f8bfeceb38 SHA256 ea06d93051b406a18cacad1ffb075c9506f1413edb6375293b33b6ccb2ed59ea -MISC ChangeLog 30662 RMD160 905ed5adaab168f955dd513d39fab285bf1edf31 SHA1 18a8dfeb07a9f60f46870a52aa69817d0258e8f1 SHA256 2cb68c9bcaa74bee958a86bda6f5831d84dafba90c4e8c975e162d46f34d154d +EBUILD R-2.15.1.ebuild 4915 RMD160 f32c14bb16898535dcadfafc427e64c33533afa1 SHA1 ef4520eb00b13338d1ee6169cc556d33e81dd370 SHA256 36e64b264ba7406373e7c9ec993d5ca5bdfeede95c0b17199633b10aa5736639 +MISC ChangeLog 30773 RMD160 ba0b18043565f04ff5457c624903f6ae1d3918ec SHA1 cc0c4651fdb528b6da2fb2a2ad0925d57fe212bd SHA256 a41765b5a10abaaa370c6add59c7f565b4d858d484a9674caa9d73b45f55df4e MISC metadata.xml 1124 RMD160 b1816af77325d46cb8670e0d23ea8b367b0b67f2 SHA1 631740a32ccdd45b3991d855b9cc44cd5e570507 SHA256 8f06d05ef29fdd4960269413a7e3e6ed5cfbdf32fa7cac5ed4c2750d58a4785b diff --git a/dev-lang/R/R-2.15.1.ebuild b/dev-lang/R/R-2.15.1.ebuild new file mode 100644 index 000000000000..4a352f3bb263 --- /dev/null +++ b/dev-lang/R/R-2.15.1.ebuild @@ -0,0 +1,173 @@ +# Copyright 1999-2012 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Header: /var/cvsroot/gentoo-x86/dev-lang/R/R-2.15.1.ebuild,v 1.1 2012/06/29 00:30:17 calchan Exp $ + +EAPI=4 + +inherit bash-completion-r1 autotools eutils flag-o-matic fortran-2 multilib versionator toolchain-funcs + +BCP=${PN}-20120306.bash_completion +DESCRIPTION="Language and environment for statistical computing and graphics" +HOMEPAGE="http://www.r-project.org/" +SRC_URI="mirror://cran/src/base/R-2/${P}.tar.gz + bash-completion? ( http://dev.gentoo.org/~bicatali/distfiles/${BCP}.bz2 )" + +LICENSE="|| ( GPL-2 GPL-3 ) LGPL-2.1" +SLOT="0" +KEYWORDS="~alpha ~amd64 ~hppa ~ia64 ~ppc ~ppc64 ~sparc ~x86 ~x86-fbsd" +IUSE="bash-completion cairo doc icu java jpeg lapack minimal nls openmp perl png profile readline static-libs tiff tk X" +REQUIRED_USE="png? ( || ( cairo X ) ) jpeg? ( || ( cairo X ) ) tiff? ( || ( cairo X ) )" + +CDEPEND="app-arch/bzip2 + app-text/ghostscript-gpl + dev-libs/libpcre + virtual/blas + virtual/fortran + cairo? ( x11-libs/cairo[X] x11-libs/pango ) + icu? ( dev-libs/icu ) + jpeg? ( virtual/jpeg ) + lapack? ( virtual/lapack ) + perl? ( dev-lang/perl ) + png? ( media-libs/libpng ) + readline? ( sys-libs/readline ) + tk? ( dev-lang/tk ) + X? ( x11-libs/libXmu x11-misc/xdg-utils )" + +DEPEND="${CDEPEND} + virtual/pkgconfig + doc? ( + virtual/latex-base + dev-texlive/texlive-fontsrecommended + )" + +RDEPEND="${CDEPEND} + ( || ( <sys-libs/zlib-1.2.5.1-r1 >=sys-libs/zlib-1.2.5.1-r2[minizip] ) ) + app-arch/xz-utils + java? ( >=virtual/jre-1.5 )" + +RESTRICT="minimal? ( test )" + +R_DIR="${EPREFIX}/usr/$(get_libdir)/${PN}" + +pkg_setup() { + if use openmp; then + FORTRAN_NEED_OPENMP=1 + tc-has-openmp || die "Please enable openmp support in your compiler" + fi + fortran-2_pkg_setup + filter-ldflags -Wl,-Bdirect -Bdirect + # avoid using existing R installation + unset R_HOME + # Temporary fix for bug #419761 + if [[ ($(tc-getCC) == *gcc) && ($(gcc-version) == 4.7) ]]; then + append-flags -fno-ipa-cp-clone + fi +} + +src_prepare() { + # gentoo bug #322965 (not applied upstream) + # https://bugs.r-project.org/bugzilla3/show_bug.cgi?id=14505 + epatch "${FILESDIR}"/${PN}-2.11.1-parallel.patch + + # respect ldflags (not applied upstream) + # https://bugs.r-project.org/bugzilla3/show_bug.cgi?id=14506 + epatch "${FILESDIR}"/${PN}-2.12.1-ldflags.patch + + # gentoo bug #383431 + # https://bugs.r-project.org/bugzilla3/show_bug.cgi?id=14951 + epatch "${FILESDIR}"/${PN}-2.13.1-zlib_header_fix.patch + + # tiff automagic + # https://bugs.r-project.org/bugzilla3/show_bug.cgi?id=14952 + epatch "${FILESDIR}"/${PN}-2.14.1-tiff.patch + + # https://bugs.r-project.org/bugzilla3/show_bug.cgi?id=14953 + epatch "${FILESDIR}"/${PN}-2.14.1-rmath-shared.patch + + # fix packages.html for doc (gentoo bug #205103) + sed -i \ + -e "s:../../../library:../../../../$(get_libdir)/R/library:g" \ + src/library/tools/R/Rd.R || die + + # fix Rscript path when installed (gentoo bug #221061) + sed -i \ + -e "s:-DR_HOME='\"\$(rhome)\"':-DR_HOME='\"${R_DIR}\"':" \ + src/unix/Makefile.in || die "sed unix Makefile failed" + + # fix HTML links to manual (gentoo bug #273957) + sed -i \ + -e 's:\.\./manual/:manual/:g' \ + $(grep -Flr ../manual/ doc) || die "sed for HTML links failed" + + use lapack && \ + export LAPACK_LIBS="$(pkg-config --libs lapack)" + + if use X; then + export R_BROWSER="$(type -p xdg-open)" + export R_PDFVIEWER="$(type -p xdg-open)" + fi + use perl && \ + export PERL5LIB="${S}/share/perl:${PERL5LIB:+:}${PERL5LIB}" + AT_M4DIR=m4 eaclocal + eautoconf +} + +src_configure() { + econf \ + --enable-byte-compiled-packages \ + --enable-R-shlib \ + --with-system-zlib \ + --with-system-bzlib \ + --with-system-pcre \ + --with-system-xz \ + --with-blas="$(pkg-config --libs blas)" \ + --docdir="${EPREFIX}/usr/share/doc/${PF}" \ + rdocdir="${EPREFIX}/usr/share/doc/${PF}" \ + $(use_enable nls) \ + $(use_enable openmp) \ + $(use_enable profile R-profiling) \ + $(use_enable profile memory-profiling) \ + $(use_enable static-libs static) \ + $(use_enable static-libs R-static-lib) \ + $(use_with cairo) \ + $(use_with icu ICU) \ + $(use_with jpeg jpeglib) \ + $(use_with lapack) \ + $(use_with !minimal recommended-packages) \ + $(use_with png libpng) \ + $(use_with readline) \ + $(use_with tiff libtiff) \ + $(use_with tk tcltk) \ + $(use_with X x) +} + +src_compile(){ + export VARTEXFONTS="${T}/fonts" + emake + emake -C src/nmath/standalone shared $(use static-libs && echo static) + use doc && emake info pdf +} + +src_install() { + default + emake -C src/nmath/standalone DESTDIR="${D}" install + + if use doc; then + emake DESTDIR="${D}" install-info install-pdf + dosym ../manual /usr/share/doc/${PF}/html/manual + fi + + cat > 99R <<-EOF + LDPATH=${R_DIR}/lib + R_HOME=${R_DIR} + EOF + doenvd 99R + use bash-completion && newbashcomp "${WORKDIR}"/${BCP} ${PN} +} + +pkg_postinst() { + if use java; then + einfo "Re-initializing java paths for ${P}" + R CMD javareconf + fi +} |