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authorJustin Lecher <jlec@gentoo.org>2010-11-11 16:19:09 +0000
committerJustin Lecher <jlec@gentoo.org>2010-11-11 16:19:09 +0000
commit8f1e85274906d6cc65ab8e04e979b0ff85da5ea7 (patch)
tree5c971346b6f5e2d4b920d460bb453533a12bf851 /sci-chemistry
parentFix regex another time, #342849 wrt Sok Ann Yap. (diff)
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Version Bump
Package-Manager: portage-2.1.9.24/cvs/Linux x86_64
Diffstat (limited to 'sci-chemistry')
-rw-r--r--sci-chemistry/pymol-apbs-plugin/ChangeLog8
-rw-r--r--sci-chemistry/pymol-apbs-plugin/Manifest14
-rw-r--r--sci-chemistry/pymol-apbs-plugin/pymol-apbs-plugin-2.1_p24.ebuild57
3 files changed, 72 insertions, 7 deletions
diff --git a/sci-chemistry/pymol-apbs-plugin/ChangeLog b/sci-chemistry/pymol-apbs-plugin/ChangeLog
index 2d2e1b29cfad..3ece7b04d06e 100644
--- a/sci-chemistry/pymol-apbs-plugin/ChangeLog
+++ b/sci-chemistry/pymol-apbs-plugin/ChangeLog
@@ -1,6 +1,12 @@
# ChangeLog for sci-chemistry/pymol-apbs-plugin
# Copyright 1999-2010 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/pymol-apbs-plugin/ChangeLog,v 1.8 2010/06/24 18:02:19 angelos Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/pymol-apbs-plugin/ChangeLog,v 1.9 2010/11/11 16:19:09 jlec Exp $
+
+*pymol-apbs-plugin-2.1_p24 (11 Nov 2010)
+
+ 11 Nov 2010; Justin Lecher <jlec@gentoo.org>
+ +pymol-apbs-plugin-2.1_p24.ebuild:
+ Version Bump
24 Jun 2010; Christoph Mende <angelos@gentoo.org>
pymol-apbs-plugin-0_p18.ebuild:
diff --git a/sci-chemistry/pymol-apbs-plugin/Manifest b/sci-chemistry/pymol-apbs-plugin/Manifest
index 534a66ea773c..9356ebefe1da 100644
--- a/sci-chemistry/pymol-apbs-plugin/Manifest
+++ b/sci-chemistry/pymol-apbs-plugin/Manifest
@@ -1,16 +1,18 @@
-----BEGIN PGP SIGNED MESSAGE-----
-Hash: SHA256
+Hash: SHA1
DIST pymol-apbs-plugin-0_p15.py 104351 RMD160 852273d6e09eb17d06b0508408f957ac547b4c12 SHA1 215a9ad498c0c28f9d8db3c18c6822b7b44917ef SHA256 c5a259ddc1931f1ec4efe0ffc3ae9e9ac4a84a28c83a4f93a06ebb7c1bef0c1d
DIST pymol-apbs-plugin-0_p18.py 108766 RMD160 bdf7a1ce29bab9cbba990bd202d4e6c33673ac77 SHA1 84477e09f461d71416777a025492c1e6e8be8174 SHA256 ec09c5a0903ac965cc29fcf0a3c1999bd939f9791d037915596092698855d12c
+DIST pymol-apbs-plugin-2.1_p24.py 113049 RMD160 05f5a00bc834780689e2754f3eacf7bff5164773 SHA1 73417c5f28db8a10f3e73dc9ba4550228d1a2c63 SHA256 d51bb1bbbf641777ee36713c0c47696d7906179e42cac8cdd0e8e156ef081c9f
EBUILD pymol-apbs-plugin-0_p15.ebuild 1560 RMD160 b73994240f25549942dbc502fd39cfce14cc8232 SHA1 ebb65fb68bf50b1ab4e6ff8a1d03b5370564e968 SHA256 f8e5f0c27d8e545e7f35fe2c6a5748595ba6e32d87ae2811d70c20fae38162c8
EBUILD pymol-apbs-plugin-0_p18.ebuild 1562 RMD160 c706d1a4304ea71d6aa7af29f2be4162b7ba5991 SHA1 99cb3fd3b7d91b026d2e7a66388701a29ff155c8 SHA256 5243c77704b6fe53ac2a93cb4494b75356f8cc9347b25d5703215afe6e59be93
-MISC ChangeLog 1602 RMD160 43906a7d88394d30d7a30e7512586606fd8100a7 SHA1 ea60f1e1a6c0c42f8b9aa2538bea17055a38201f SHA256 aa21288ba172c8926153e3b34b472a28e43a5d2e3f0f071871f8137aa29c7568
+EBUILD pymol-apbs-plugin-2.1_p24.ebuild 1563 RMD160 7c762556ec3d973891a694468b84634a3c990189 SHA1 f5a3ec559495b5724d9ef52ad9191da3dabc594d SHA256 9699ed1122483edd8d9a631273fba0daa8d0dbcd580161bd2a66251df90a8949
+MISC ChangeLog 1741 RMD160 a200a59a4cf474d29a84a67fbfb7bc82bf9e4b4d SHA1 1104faa9f70825e54caa7b1a74041cb1a026272e SHA256 66993b72e4a801e81961902601ac6d63337f41425fb6de389d6b07f2b2cf5f80
MISC metadata.xml 216 RMD160 04a6fc4e2160b439296b52aa97d5b7d83af75508 SHA1 9561c9e6eada6aac9b503407917900529ce703e9 SHA256 24f5c205c2655ef27138c8aa087701626f5b4c666229c9ef7fe814e63ea2e776
-----BEGIN PGP SIGNATURE-----
-Version: GnuPG v2.0.15 (GNU/Linux)
+Version: GnuPG v2.0.16 (GNU/Linux)
-iF4EAREIAAYFAkwjnckACgkQmWq1bYTyC0OVKgD+Pq7bCLb6Sl18japDECLxEOL0
-kwuxTt83cyLyfrp7ZcsBALAnAhHXY0C1/viz68Gpm5k8MtVewL0T939sm0bOGvyE
-=sR51
+iEUEARECAAYFAkzcF4IACgkQgAnW8HDreRZCZQCeIp3JpdRUSE8m+skRXjZGmH2n
+BdsAmKYu36CrsHlE8SNxrNH4vSUS+dE=
+=kI43
-----END PGP SIGNATURE-----
diff --git a/sci-chemistry/pymol-apbs-plugin/pymol-apbs-plugin-2.1_p24.ebuild b/sci-chemistry/pymol-apbs-plugin/pymol-apbs-plugin-2.1_p24.ebuild
new file mode 100644
index 000000000000..c7c4988005d7
--- /dev/null
+++ b/sci-chemistry/pymol-apbs-plugin/pymol-apbs-plugin-2.1_p24.ebuild
@@ -0,0 +1,57 @@
+# Copyright 1999-2010 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/pymol-apbs-plugin/pymol-apbs-plugin-2.1_p24.ebuild,v 1.1 2010/11/11 16:19:09 jlec Exp $
+
+EAPI="3"
+
+PYTHON_DEPEND="2"
+SUPPORT_PYTHON_ABIS="1"
+
+inherit python
+
+MY_PV="${PV##*_p}"
+
+DESCRIPTION="APBS plugin for pymol"
+HOMEPAGE="http://sourceforge.net/projects/pymolapbsplugin/"
+SRC_URI="http://pymolapbsplugin.svn.sourceforge.net/viewvc/pymolapbsplugin/trunk/src/apbsplugin.py?revision=${MY_PV} -> ${P}.py"
+
+SLOT="0"
+KEYWORDS="~amd64 ~ppc ~x86 ~amd64-linux ~x86-linux"
+LICENSE="pymol"
+IUSE=""
+
+RDEPEND="
+ sci-chemistry/apbs
+ sci-chemistry/pdb2pqr
+ !<sci-chemistry/pymol-1.2.2-r1"
+DEPEND="${RDEPEND}"
+RESTRICT_PYTHON_ABIS="3.*"
+
+src_unpack() {
+ mkdir "${S}"
+ cp "${DISTDIR}"/${P}.py "${S}"/
+ python_copy_sources
+}
+
+src_install() {
+ installation() {
+ sed \
+ -e "s:^APBS_BINARY_LOCATION.*:APBS_BINARY_LOCATION = \"${EPREFIX}/usr/bin/apbs\":g" \
+ -e "s:^APBS_PSIZE_LOCATION.*:APBS_PSIZE_LOCATION = \"${EPREFIX}/$(python_get_sitedir)/pdb2pqr/src/\":g" \
+ -e "s:^APBS_PDB2PQR_LOCATION.*:APBS_PDB2PQR_LOCATION = \"${EPREFIX}/$(python_get_sitedir)/pdb2pqr/\":g" \
+ -e "s:^TEMPORARY_FILE_DIR.*:TEMPORARY_FILE_DIR = \"./\":g" \
+ -i ${P}.py
+
+ insinto $(python_get_sitedir)/pmg_tk/startup/
+ newins ${P}.py apbs_tools.py || die
+ }
+ python_execute_function -s installation
+}
+
+pkg_postinst() {
+ python_mod_optimize pmg_tk/startup/apbs_tools.py
+}
+
+pkg_postrm() {
+ python_mod_cleanup pmg_tk/startup/apbs_tools.py
+}