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authorSimon Stelling <blubb@gentoo.org>2005-11-19 18:23:19 +0000
committerSimon Stelling <blubb@gentoo.org>2005-11-19 18:23:19 +0000
commite2d36defb407b5d57b35c70c064d399856572208 (patch)
tree2426d340f8ee60e9058c1d420e407701612353b6 /sci-biology
parentSecurity version bump with stable keywords for denial of service vulnerabilit... (diff)
downloadhistorical-e2d36defb407b5d57b35c70c064d399856572208.tar.gz
historical-e2d36defb407b5d57b35c70c064d399856572208.tar.bz2
historical-e2d36defb407b5d57b35c70c064d399856572208.zip
stable on amd64
Package-Manager: portage-2.0.51.22-r3
Diffstat (limited to 'sci-biology')
-rw-r--r--sci-biology/aaindex/ChangeLog5
-rw-r--r--sci-biology/aaindex/aaindex-6.0.ebuild4
-rw-r--r--sci-biology/cutg/ChangeLog5
-rw-r--r--sci-biology/cutg/cutg-148.ebuild4
-rw-r--r--sci-biology/emboss/ChangeLog5
-rw-r--r--sci-biology/emboss/emboss-3.0.0.ebuild4
-rw-r--r--sci-biology/prints/ChangeLog5
-rw-r--r--sci-biology/prints/prints-37.0.ebuild4
-rw-r--r--sci-biology/prosite/ChangeLog5
-rw-r--r--sci-biology/prosite/prosite-19.10.ebuild4
-rw-r--r--sci-biology/rebase/ChangeLog5
-rw-r--r--sci-biology/rebase/rebase-509.ebuild4
-rw-r--r--sci-biology/transfac/ChangeLog5
-rw-r--r--sci-biology/transfac/transfac-3.2.ebuild4
14 files changed, 42 insertions, 21 deletions
diff --git a/sci-biology/aaindex/ChangeLog b/sci-biology/aaindex/ChangeLog
index e73639c1fc2f..7932b255dcf7 100644
--- a/sci-biology/aaindex/ChangeLog
+++ b/sci-biology/aaindex/ChangeLog
@@ -1,6 +1,9 @@
# ChangeLog for sci-biology/aaindex
# Copyright 2000-2005 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/aaindex/ChangeLog,v 1.9 2005/10/18 13:39:42 ribosome Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/aaindex/ChangeLog,v 1.10 2005/11/19 18:22:36 blubb Exp $
+
+ 19 Nov 2005; Simon Stelling <blubb@gentoo.org> aaindex-6.0.ebuild:
+ stable on amd64
*aaindex-7.0 (18 Oct 2005)
diff --git a/sci-biology/aaindex/aaindex-6.0.ebuild b/sci-biology/aaindex/aaindex-6.0.ebuild
index f8727cbb282c..38f88099a274 100644
--- a/sci-biology/aaindex/aaindex-6.0.ebuild
+++ b/sci-biology/aaindex/aaindex-6.0.ebuild
@@ -1,6 +1,6 @@
# Copyright 1999-2005 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/aaindex/aaindex-6.0.ebuild,v 1.9 2005/09/04 14:51:37 blubb Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/aaindex/aaindex-6.0.ebuild,v 1.10 2005/11/19 18:22:36 blubb Exp $
DESCRIPTION="Amino acid indices and similarity matrices"
HOMEPAGE="http://www.genome.ad.jp/aaindex"
@@ -11,7 +11,7 @@ SRC_URI="ftp://ftp.genome.ad.jp/pub/db/genomenet/${PN}/${PN}.doc
ftp://ftp.genome.ad.jp/pub/db/genomenet/${PN}/list_of_indices"
LICENSE="public-domain"
SLOT="0"
-KEYWORDS="~amd64 ppc ppc-macos ppc64 x86"
+KEYWORDS="amd64 ppc ppc-macos ppc64 x86"
IUSE="emboss minimal"
# Minimal build keeps only the indexed files (if applicable) and the documentation.
# The non-indexed database is not installed.
diff --git a/sci-biology/cutg/ChangeLog b/sci-biology/cutg/ChangeLog
index c30bb92b5abb..8025a57c26c9 100644
--- a/sci-biology/cutg/ChangeLog
+++ b/sci-biology/cutg/ChangeLog
@@ -1,6 +1,9 @@
# ChangeLog for sci-biology/cutg
# Copyright 2000-2005 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/cutg/ChangeLog,v 1.30 2005/10/18 00:19:37 ribosome Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/cutg/ChangeLog,v 1.31 2005/11/19 18:22:06 blubb Exp $
+
+ 19 Nov 2005; Simon Stelling <blubb@gentoo.org> cutg-148.ebuild:
+ stable on amd64
*cutg-149 (18 Oct 2005)
diff --git a/sci-biology/cutg/cutg-148.ebuild b/sci-biology/cutg/cutg-148.ebuild
index c85000525229..311dd552281d 100644
--- a/sci-biology/cutg/cutg-148.ebuild
+++ b/sci-biology/cutg/cutg-148.ebuild
@@ -1,6 +1,6 @@
# Copyright 1999-2005 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/cutg/cutg-148.ebuild,v 1.6 2005/10/08 21:47:38 hansmi Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/cutg/cutg-148.ebuild,v 1.7 2005/11/19 18:22:06 blubb Exp $
DESCRIPTION="Codon usage tables calculated from GenBank"
HOMEPAGE="http://www.kazusa.or.jp/codon/"
@@ -8,7 +8,7 @@ SRC_URI="ftp://ftp.kazusa.or.jp/pub/codon/current/compressed/CUTG.${PV}.tar.gz"
LICENSE="public-domain"
SLOT="0"
-KEYWORDS="~amd64 ppc ppc-macos ppc64 x86"
+KEYWORDS="amd64 ppc ppc-macos ppc64 x86"
IUSE="emboss minimal"
# Minimal build keeps only the indexed files (if applicable) and the documentation.
# The non-indexed database is not installed.
diff --git a/sci-biology/emboss/ChangeLog b/sci-biology/emboss/ChangeLog
index aaf5b94ef8c8..2fd4735e9261 100644
--- a/sci-biology/emboss/ChangeLog
+++ b/sci-biology/emboss/ChangeLog
@@ -1,6 +1,9 @@
# ChangeLog for sci-biology/emboss
# Copyright 2000-2005 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/emboss/ChangeLog,v 1.22 2005/10/04 00:13:13 ribosome Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/emboss/ChangeLog,v 1.23 2005/11/19 18:22:47 blubb Exp $
+
+ 19 Nov 2005; Simon Stelling <blubb@gentoo.org> emboss-3.0.0.ebuild:
+ stable on amd64
04 Oct 2005; Olivier Fisette <ribosome@gentoo.org> -emboss-2.10.0.ebuild:
Removed obsolete version.
diff --git a/sci-biology/emboss/emboss-3.0.0.ebuild b/sci-biology/emboss/emboss-3.0.0.ebuild
index 40c18ed7d4c7..a3925783d8df 100644
--- a/sci-biology/emboss/emboss-3.0.0.ebuild
+++ b/sci-biology/emboss/emboss-3.0.0.ebuild
@@ -1,6 +1,6 @@
# Copyright 1999-2005 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/emboss/emboss-3.0.0.ebuild,v 1.7 2005/10/03 21:57:27 ribosome Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/emboss/emboss-3.0.0.ebuild,v 1.8 2005/11/19 18:22:47 blubb Exp $
DESCRIPTION="The European Molecular Biology Open Software Suite - A sequence analysis package"
HOMEPAGE="http://emboss.sourceforge.net/"
@@ -8,7 +8,7 @@ SRC_URI="ftp://${PN}.open-bio.org/pub/EMBOSS/EMBOSS-${PV}.tar.gz"
LICENSE="GPL-2 LGPL-2"
SLOT="0"
-KEYWORDS="~amd64 ppc ppc-macos ppc64 x86"
+KEYWORDS="amd64 ppc ppc-macos ppc64 x86"
IUSE="X png minimal"
DEPEND="X? ( virtual/x11 )
diff --git a/sci-biology/prints/ChangeLog b/sci-biology/prints/ChangeLog
index d9ae1520232e..a0512cb01505 100644
--- a/sci-biology/prints/ChangeLog
+++ b/sci-biology/prints/ChangeLog
@@ -1,6 +1,9 @@
# ChangeLog for sci-biology/prints
# Copyright 2000-2005 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/prints/ChangeLog,v 1.10 2005/10/18 13:44:26 ribosome Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/prints/ChangeLog,v 1.11 2005/11/19 18:22:33 blubb Exp $
+
+ 19 Nov 2005; Simon Stelling <blubb@gentoo.org> prints-37.0.ebuild:
+ stable on amd64
*prints-38.0 (18 Oct 2005)
diff --git a/sci-biology/prints/prints-37.0.ebuild b/sci-biology/prints/prints-37.0.ebuild
index b096c321d5d9..02ff6f3a5fbc 100644
--- a/sci-biology/prints/prints-37.0.ebuild
+++ b/sci-biology/prints/prints-37.0.ebuild
@@ -1,6 +1,6 @@
# Copyright 1999-2005 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/prints/prints-37.0.ebuild,v 1.9 2005/09/04 14:54:45 blubb Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/prints/prints-37.0.ebuild,v 1.10 2005/11/19 18:22:33 blubb Exp $
DESCRIPTION="A protein motif fingerprint database"
HOMEPAGE="http://www.bioinf.man.ac.uk/dbbrowser/PRINTS/"
@@ -12,7 +12,7 @@ SRC_URI="ftp://ftp.ebi.ac.uk/pub/databases/${PN}/newpr.lis.gz
ftp://ftp.ebi.ac.uk/pub/databases/${PN}/${PN}37_0.vsn.gz"
LICENSE="public-domain"
SLOT="0"
-KEYWORDS="~amd64 ppc ppc-macos ppc64 x86"
+KEYWORDS="amd64 ppc ppc-macos ppc64 x86"
IUSE="emboss minimal"
# Minimal build keeps only the indexed files (if applicable) and the documentation.
# The non-indexed database is not installed.
diff --git a/sci-biology/prosite/ChangeLog b/sci-biology/prosite/ChangeLog
index df4f5b2c41aa..70ad5427897f 100644
--- a/sci-biology/prosite/ChangeLog
+++ b/sci-biology/prosite/ChangeLog
@@ -1,6 +1,6 @@
# ChangeLog for sci-biology/prosite
# Copyright 2000-2005 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/prosite/ChangeLog,v 1.54 2005/11/19 15:29:03 ribosome Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/prosite/ChangeLog,v 1.55 2005/11/19 18:23:19 blubb Exp $
19 Nov 2005; Olivier Fisette <ribosome@gentoo.org>
files/digest-prosite-19.14:
@@ -11,6 +11,9 @@
13 Nov 2005; Olivier Fisette <ribosome@gentoo.org> +prosite-19.14.ebuild:
New version
+ 19 Nov 2005; Simon Stelling <blubb@gentoo.org> prosite-19.10.ebuild:
+ stable on amd64
+
*prosite-19.13 (07 Nov 2005)
07 Nov 2005; Olivier Fisette <ribosome@gentoo.org> +prosite-19.13.ebuild:
diff --git a/sci-biology/prosite/prosite-19.10.ebuild b/sci-biology/prosite/prosite-19.10.ebuild
index 33c6b953259e..a20ec6f16d94 100644
--- a/sci-biology/prosite/prosite-19.10.ebuild
+++ b/sci-biology/prosite/prosite-19.10.ebuild
@@ -1,13 +1,13 @@
# Copyright 1999-2005 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/prosite/prosite-19.10.ebuild,v 1.5 2005/10/03 21:57:27 ribosome Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/prosite/prosite-19.10.ebuild,v 1.6 2005/11/19 18:23:19 blubb Exp $
DESCRIPTION="A protein families and domains database"
HOMEPAGE="http://ca.expasy.org/prosite"
SRC_URI="mirror://gentoo/${P}.tar.bz2"
LICENSE="swiss-prot"
SLOT="0"
-KEYWORDS="~amd64 ppc ppc-macos ppc64 x86"
+KEYWORDS="amd64 ppc ppc-macos ppc64 x86"
IUSE="emboss minimal"
# Minimal build keeps only the indexed files (if applicable) and the documentation.
# The non-indexed database is not installed.
diff --git a/sci-biology/rebase/ChangeLog b/sci-biology/rebase/ChangeLog
index eb77c3af423b..496dda088b36 100644
--- a/sci-biology/rebase/ChangeLog
+++ b/sci-biology/rebase/ChangeLog
@@ -1,6 +1,9 @@
# ChangeLog for sci-biology/rebase
# Copyright 2000-2005 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/rebase/ChangeLog,v 1.40 2005/11/07 19:53:36 ribosome Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/rebase/ChangeLog,v 1.41 2005/11/19 18:22:16 blubb Exp $
+
+ 19 Nov 2005; Simon Stelling <blubb@gentoo.org> rebase-509.ebuild:
+ stable on amd64
*rebase-511 (07 Nov 2005)
diff --git a/sci-biology/rebase/rebase-509.ebuild b/sci-biology/rebase/rebase-509.ebuild
index 927628e224c5..223a65c7f8a0 100644
--- a/sci-biology/rebase/rebase-509.ebuild
+++ b/sci-biology/rebase/rebase-509.ebuild
@@ -1,6 +1,6 @@
# Copyright 1999-2005 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/rebase/rebase-509.ebuild,v 1.5 2005/10/08 21:51:58 j4rg0n Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/rebase/rebase-509.ebuild,v 1.6 2005/11/19 18:22:16 blubb Exp $
DESCRIPTION="A restriction enzyme database"
HOMEPAGE="http://rebase.neb.com"
@@ -8,7 +8,7 @@ SRC_URI="mirror://gentoo/${P}.tar.bz2"
LICENSE="public-domain"
SLOT="0"
-KEYWORDS="~amd64 ppc ppc-macos ppc64 x86"
+KEYWORDS="amd64 ppc ppc-macos ppc64 x86"
IUSE="emboss minimal"
# Minimal build keeps only the indexed files (if applicable) and the documentation.
# The non-indexed database is not installed.
diff --git a/sci-biology/transfac/ChangeLog b/sci-biology/transfac/ChangeLog
index d526ce25ad28..86987baa29e4 100644
--- a/sci-biology/transfac/ChangeLog
+++ b/sci-biology/transfac/ChangeLog
@@ -1,6 +1,9 @@
# ChangeLog for sci-biology/transfac
# Copyright 2000-2005 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/transfac/ChangeLog,v 1.9 2005/09/04 14:55:55 blubb Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/transfac/ChangeLog,v 1.10 2005/11/19 18:22:22 blubb Exp $
+
+ 19 Nov 2005; Simon Stelling <blubb@gentoo.org> transfac-3.2.ebuild:
+ stable on amd64
04 Sep 2005; Simon Stelling <blubb@gentoo.org> transfac-3.2.ebuild:
added ~amd64 keyword
diff --git a/sci-biology/transfac/transfac-3.2.ebuild b/sci-biology/transfac/transfac-3.2.ebuild
index 4df552442796..fc2242242f5e 100644
--- a/sci-biology/transfac/transfac-3.2.ebuild
+++ b/sci-biology/transfac/transfac-3.2.ebuild
@@ -1,6 +1,6 @@
# Copyright 1999-2005 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/transfac/transfac-3.2.ebuild,v 1.9 2005/09/04 14:55:55 blubb Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/transfac/transfac-3.2.ebuild,v 1.10 2005/11/19 18:22:22 blubb Exp $
DESCRIPTION="A database of eucaryotic transcription factors"
HOMEPAGE="http://www.gene-regulation.com/pub/databases.html"
@@ -8,7 +8,7 @@ SRC_URI="ftp://ftp.ebi.ac.uk/pub/databases/${PN}/${PN}32.tar.Z"
LICENSE="public-domain"
SLOT="3"
-KEYWORDS="~amd64 ppc ppc-macos ppc64 x86"
+KEYWORDS="amd64 ppc ppc-macos ppc64 x86"
IUSE="emboss minimal"
# Minimal build keeps only the indexed files (if applicable) and the documentation.
# The non-indexed database is not installed.