Removed buggy version (see bug #202602).

Package-Manager: portage-2.1.3.19

4 files changed, 8 insertions, 59 deletions

diff --git a/sci-biology/biopython/ChangeLog b/sci-biology/biopython/ChangeLog
index 74a67af5c96a..e2aa8bb2b32c 100644
--- a/sci-biology/biopython/ChangeLog
+++ b/sci-biology/biopython/ChangeLog
@@ -1,6 +1,9 @@
 # ChangeLog for sci-biology/biopython
 # Copyright 2002-2008 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/biopython/ChangeLog,v 1.19 2008/01/30 02:53:58 ribosome Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/biopython/ChangeLog,v 1.20 2008/01/30 02:56:32 ribosome Exp $
+
+  30 Jan 2008; Olivier Fisette <ribosome@gentoo.org> -biopython-1.43.ebuild:
+  Removed buggy version (see bug #202602).
 
 *biopython-1.44 (30 Jan 2008)
 
diff --git a/sci-biology/biopython/Manifest b/sci-biology/biopython/Manifest
index 4ef31d2613a9..6eccc97c629c 100644
--- a/sci-biology/biopython/Manifest
+++ b/sci-biology/biopython/Manifest
@@ -7,24 +7,19 @@ MD5 bab2613dd83d763460ca816118f91c62 files/biopython-1.44-sequtils-complement.pa
 RMD160 d7f8822ad8946e364bb4491a502055e7bf482478 files/biopython-1.44-sequtils-complement.patch 1033
 SHA256 9e2f0e85e8be14971667037ac49edec94d73241c88a7cf9caeba6234955ed780 files/biopython-1.44-sequtils-complement.patch 1033
 DIST biopython-1.42.tar.gz 3933507 RMD160 9f3027fb1b3326885376eaf7a5a714a26e0bc333 SHA1 107321d782b0a00bc3c302cd8c7e4b82c013d6d7 SHA256 ba4d00fdf7de67196ecba317dee09a14850b40596bd83d73e458c5f19fc9fc58
-DIST biopython-1.43.tar.gz 3867907 RMD160 d7d326659032f9587b85b339941ecb306b694403 SHA1 030e60be1686c81a289dde72811642636a094a28 SHA256 eb424da9efddbf376c31660786ecb34ff893ea752bf7300f4a06d1b8c6ba175b
 DIST biopython-1.44.tar.gz 3840036 RMD160 ecbbe2f46f0e5d124d910632dc9a7fd051202c0b SHA1 ca2a35c9e92a219256fe4fc2a232df5328f9f5d9 SHA256 e47c4a7c612e11cb6c1c0515274ce231646b31bbf1c9e3ac58998928c0ad3c72
 EBUILD biopython-1.42.ebuild 843 RMD160 b5894c9b6cd76e24e0968829908bc71ad064dd0b SHA1 80c6e3f57a2644ab83015cb1fd4e2744cff39003 SHA256 003a04d3d6f6fcfacae68a828726f52020d2c7f32f493813e928deff4d4f2538
 MD5 4f5b0b5715dd800f0b777304738fcf5f biopython-1.42.ebuild 843
 RMD160 b5894c9b6cd76e24e0968829908bc71ad064dd0b biopython-1.42.ebuild 843
 SHA256 003a04d3d6f6fcfacae68a828726f52020d2c7f32f493813e928deff4d4f2538 biopython-1.42.ebuild 843
-EBUILD biopython-1.43.ebuild 1224 RMD160 fda3e428e88912202ecd8f938d51b6d6c7e22c80 SHA1 32b717886e1950cd90f21c25c96e0c82d3eb2640 SHA256 1a127fc3189f323b4349ec32e78130dec22a4731a507fbdf1edf14ceebe29647
-MD5 1784c8af162b65ce450abf73cd0dc904 biopython-1.43.ebuild 1224
-RMD160 fda3e428e88912202ecd8f938d51b6d6c7e22c80 biopython-1.43.ebuild 1224
-SHA256 1a127fc3189f323b4349ec32e78130dec22a4731a507fbdf1edf14ceebe29647 biopython-1.43.ebuild 1224
 EBUILD biopython-1.44.ebuild 1283 RMD160 9b92d5b876aa4461d14d156fd35408a9661c6b04 SHA1 805e7277ef00ee27e123c3af588a9dbd969cc270 SHA256 095ba6142a0830f8e7ceb7350ca60149b27152b873bbd2b472d324a67febb322
 MD5 a01d7c847f01db81d2a22c4f523edaf1 biopython-1.44.ebuild 1283
 RMD160 9b92d5b876aa4461d14d156fd35408a9661c6b04 biopython-1.44.ebuild 1283
 SHA256 095ba6142a0830f8e7ceb7350ca60149b27152b873bbd2b472d324a67febb322 biopython-1.44.ebuild 1283
-MISC ChangeLog 4425 RMD160 c416e189705e9025fec10c6685528b3d82e4849a SHA1 0df876531a2d8198fe554e137bc408fa1b29b1e0 SHA256 4784d6e8ab63e52910ebbca82c297e327927f06cf7a5572b51f94eecc24b1a6e
-MD5 2fd4eb696ae4744bcdf3a6315b945c39 ChangeLog 4425
-RMD160 c416e189705e9025fec10c6685528b3d82e4849a ChangeLog 4425
-SHA256 4784d6e8ab63e52910ebbca82c297e327927f06cf7a5572b51f94eecc24b1a6e ChangeLog 4425
+MISC ChangeLog 4546 RMD160 b1ffc3ec89188d5529f1079864b2447e0c35cd0b SHA1 2d633e28d1821f953b486f7ab759bceb198538cb SHA256 5b582e7c948ec5589f2d1f6542d09d8d9ae6d3413689f62e65ce671d75475133
+MD5 b2ebea72f0512682e4a3c6dfa5646f61 ChangeLog 4546
+RMD160 b1ffc3ec89188d5529f1079864b2447e0c35cd0b ChangeLog 4546
+SHA256 5b582e7c948ec5589f2d1f6542d09d8d9ae6d3413689f62e65ce671d75475133 ChangeLog 4546
 MISC metadata.xml 262 RMD160 4eabcbcb990d4d5e3b34db8c27bcd2c0cfcf7501 SHA1 3c024ca60a2b93ed0e0311f6b05ef5ef117bee31 SHA256 89af818a993faf14a4a87e2f254943420156c2a317c385480a9533ba682b650f
 MD5 5f35ae4b4cb1cd144db7c7c093d3fd80 metadata.xml 262
 RMD160 4eabcbcb990d4d5e3b34db8c27bcd2c0cfcf7501 metadata.xml 262
@@ -32,9 +27,6 @@ SHA256 89af818a993faf14a4a87e2f254943420156c2a317c385480a9533ba682b650f metadata
 MD5 849ac28783dbe22d1aa863f1bddbc239 files/digest-biopython-1.42 247
 RMD160 530d31339488bdc57982b5d99b88632530e184d5 files/digest-biopython-1.42 247
 SHA256 ecaf906566a4d758f5ac3f8ffeecca195eae920c614579c2d64ecb307ce2c7dc files/digest-biopython-1.42 247
-MD5 21edeaf080b13692cd78336c1b0a69be files/digest-biopython-1.43 247
-RMD160 5d54095533d604b5c8be8e504d1130b31bac5d97 files/digest-biopython-1.43 247
-SHA256 c0e41064db41cdbd073b3aeb2bb2a1daaf8a333bf197aad6e075a94b04d1e1b7 files/digest-biopython-1.43 247
 MD5 a4b7eabdc2b67382d8160a94a0a1309a files/digest-biopython-1.44 247
 RMD160 a4356748c264f6cd623666ec8118134616cdccca files/digest-biopython-1.44 247
 SHA256 1bc8178234a3d25bae300b4be2516278865b99d3e3354cd4825bbb02c9f7ea24 files/digest-biopython-1.44 247
diff --git a/sci-biology/biopython/biopython-1.43.ebuild b/sci-biology/biopython/biopython-1.43.ebuild
deleted file mode 100644
index 4fb252896011..000000000000
--- a/sci-biology/biopython/biopython-1.43.ebuild
+++ /dev/null
@@ -1,43 +0,0 @@
-# Copyright 1999-2007 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/biopython/biopython-1.43.ebuild,v 1.1 2007/05/17 18:47:30 ribosome Exp $
-
-inherit distutils eutils
-
-DESCRIPTION="Biopython - Python modules for computational molecular biology"
-LICENSE="as-is"
-HOMEPAGE="http://www.biopython.org"
-SRC_URI="http://www.biopython.org/DIST/${P}.tar.gz"
-
-SLOT="0"
-IUSE="kdtree"
-KEYWORDS="~alpha ~amd64 ~ppc ~sparc ~x86"
-
-DEPEND=">=dev-lang/python-2.2
-		>=dev-python/egenix-mx-base-2.0.3
-		>=dev-python/numeric-19.0
-		>=dev-python/reportlab-1.11"
-
-src_unpack() {
-	unpack ${A}
-	cd "${S}"
-	epatch "${FILESDIR}/${P}-buildkdtree.patch"
-	if use kdtree; then
-		sed -i -e 's/USE_KDTREE = False/USE_KDTREE = True/' \
-				setup.py || die "Could not apply patch for KDTree support."
-	fi
-}
-
-src_compile() {
-	distutils_src_compile
-}
-
-src_install() {
-	DOCS="Doc/*.txt Doc/*.tex Doc/install/*.txt"
-	distutils_src_install
-
-	dohtml Doc/install/*.html || die "Failed to install HTML install docs."
-	dohtml Doc/*.html || die "Failed to install HTML docs."
-	cp -r Doc/examples/ Doc/*.pdf ${D}/usr/share/doc/${PF}/ || \
-			die "Failed to install documentation."
-}
diff --git a/sci-biology/biopython/files/digest-biopython-1.43 b/sci-biology/biopython/files/digest-biopython-1.43
deleted file mode 100644
index 759c7a1330c3..000000000000
--- a/sci-biology/biopython/files/digest-biopython-1.43
+++ /dev/null
@@ -1,3 +0,0 @@
-MD5 3c275b321bb1db7d8bda764913aaedcd biopython-1.43.tar.gz 3867907
-RMD160 d7d326659032f9587b85b339941ecb306b694403 biopython-1.43.tar.gz 3867907
-SHA256 eb424da9efddbf376c31660786ecb34ff893ea752bf7300f4a06d1b8c6ba175b biopython-1.43.tar.gz 3867907