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authorSven Wegener <swegener@gentoo.org>2005-07-09 22:57:34 +0000
committerSven Wegener <swegener@gentoo.org>2005-07-09 22:57:34 +0000
commit850222242afe2cd162bae961fa806982486dae3e (patch)
treee838f5ece7bade7c04a21dd6013ca50a0ed5aeed /sci-biology
parentVersion bumped (diff)
downloadhistorical-850222242afe2cd162bae961fa806982486dae3e.tar.gz
historical-850222242afe2cd162bae961fa806982486dae3e.tar.bz2
historical-850222242afe2cd162bae961fa806982486dae3e.zip
QA: Removed CATEGORY=
Package-Manager: portage-2.0.51.22-r1
Diffstat (limited to 'sci-biology')
-rw-r--r--sci-biology/bioperl-pipeline/bioperl-pipeline-0.1.ebuild8
-rw-r--r--sci-biology/bioperl-run/bioperl-run-1.2.2.ebuild3
-rw-r--r--sci-biology/bioperl-run/bioperl-run-1.4.ebuild3
-rw-r--r--sci-biology/bioperl/bioperl-1.0.2.ebuild3
-rw-r--r--sci-biology/bioperl/bioperl-1.2.2.ebuild6
-rw-r--r--sci-biology/bioperl/bioperl-1.2.3.ebuild7
-rw-r--r--sci-biology/bioperl/bioperl-1.2.ebuild4
-rw-r--r--sci-biology/bioperl/bioperl-1.4.ebuild4
-rw-r--r--sci-biology/generic-genome-browser/generic-genome-browser-1.58.ebuild7
9 files changed, 11 insertions, 34 deletions
diff --git a/sci-biology/bioperl-pipeline/bioperl-pipeline-0.1.ebuild b/sci-biology/bioperl-pipeline/bioperl-pipeline-0.1.ebuild
index 2092ef754016..7336cb639861 100644
--- a/sci-biology/bioperl-pipeline/bioperl-pipeline-0.1.ebuild
+++ b/sci-biology/bioperl-pipeline/bioperl-pipeline-0.1.ebuild
@@ -1,9 +1,8 @@
# Copyright 1999-2005 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/bioperl-pipeline/bioperl-pipeline-0.1.ebuild,v 1.4 2005/07/09 17:59:22 swegener Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/bioperl-pipeline/bioperl-pipeline-0.1.ebuild,v 1.5 2005/07/09 22:55:04 swegener Exp $
inherit perl-module
-CATEGORY="sci-biology"
DESCRIPTION="A collection of tools for bioinformatics, genomics and life science research: Biopipe"
HOMEPAGE="http://www.biopipe.org/"
@@ -25,11 +24,6 @@ RDEPEND="
DEPEND=""
-src_unpack() {
- unpack ${A}
- cd ${S}
-}
-
src_compile() {
# there's a test to run for BioGFFDB if using mysql
perl-module_src_compile || die "compile failed"
diff --git a/sci-biology/bioperl-run/bioperl-run-1.2.2.ebuild b/sci-biology/bioperl-run/bioperl-run-1.2.2.ebuild
index bf89df65c25c..c3fa6fdf8211 100644
--- a/sci-biology/bioperl-run/bioperl-run-1.2.2.ebuild
+++ b/sci-biology/bioperl-run/bioperl-run-1.2.2.ebuild
@@ -1,9 +1,8 @@
# Copyright 1999-2005 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/bioperl-run/bioperl-run-1.2.2.ebuild,v 1.4 2005/05/25 13:56:38 mcummings Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/bioperl-run/bioperl-run-1.2.2.ebuild,v 1.5 2005/07/09 22:56:10 swegener Exp $
inherit perl-module eutils
-CATEGORY="sci-biology"
DESCRIPTION="A collection of tools for bioinformatics, genomics and life science research: subset required to run analyses"
HOMEPAGE="http://www.bioperl.org/"
diff --git a/sci-biology/bioperl-run/bioperl-run-1.4.ebuild b/sci-biology/bioperl-run/bioperl-run-1.4.ebuild
index bbbaf4568d55..674f77c34f2a 100644
--- a/sci-biology/bioperl-run/bioperl-run-1.4.ebuild
+++ b/sci-biology/bioperl-run/bioperl-run-1.4.ebuild
@@ -1,9 +1,8 @@
# Copyright 1999-2005 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/bioperl-run/bioperl-run-1.4.ebuild,v 1.4 2005/05/25 13:56:55 mcummings Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/bioperl-run/bioperl-run-1.4.ebuild,v 1.5 2005/07/09 22:56:10 swegener Exp $
inherit perl-module eutils
-CATEGORY="sci-biology"
DESCRIPTION="A collection of tools for bioinformatics, genomics and life science research: subset required to run analyses"
HOMEPAGE="http://www.bioperl.org/"
diff --git a/sci-biology/bioperl/bioperl-1.0.2.ebuild b/sci-biology/bioperl/bioperl-1.0.2.ebuild
index 24a0e31176ac..54d46c701d7f 100644
--- a/sci-biology/bioperl/bioperl-1.0.2.ebuild
+++ b/sci-biology/bioperl/bioperl-1.0.2.ebuild
@@ -1,9 +1,8 @@
# Copyright 1999-2005 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/bioperl/bioperl-1.0.2.ebuild,v 1.5 2005/05/25 14:46:11 mcummings Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/bioperl/bioperl-1.0.2.ebuild,v 1.6 2005/07/09 22:57:34 swegener Exp $
inherit perl-module
-CATEGORY="sci-biology"
DESCRIPTION="A collection of tools for bioinformatics, genomics and life science research"
HOMEPAGE="http://www.bioperl.org/"
diff --git a/sci-biology/bioperl/bioperl-1.2.2.ebuild b/sci-biology/bioperl/bioperl-1.2.2.ebuild
index 239ec5f3bb2f..64486bd35368 100644
--- a/sci-biology/bioperl/bioperl-1.2.2.ebuild
+++ b/sci-biology/bioperl/bioperl-1.2.2.ebuild
@@ -1,9 +1,8 @@
# Copyright 1999-2005 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/bioperl/bioperl-1.2.2.ebuild,v 1.5 2005/05/25 14:46:29 mcummings Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/bioperl/bioperl-1.2.2.ebuild,v 1.6 2005/07/09 22:57:34 swegener Exp $
inherit perl-module eutils
-CATEGORY="sci-biology"
DESCRIPTION="A collection of tools for bioinformatics, genomics and life science research"
HOMEPAGE="http://www.bioperl.org/"
@@ -15,8 +14,7 @@ SLOT="0"
KEYWORDS="x86"
IUSE="mysql gd"
-DEPEND="${DEPEND}
- perl-core/File-Temp
+DEPEND="perl-core/File-Temp
dev-perl/HTML-Parser
dev-perl/IO-String
dev-perl/IO-stringy
diff --git a/sci-biology/bioperl/bioperl-1.2.3.ebuild b/sci-biology/bioperl/bioperl-1.2.3.ebuild
index 375b1c23070d..7483c247e9c1 100644
--- a/sci-biology/bioperl/bioperl-1.2.3.ebuild
+++ b/sci-biology/bioperl/bioperl-1.2.3.ebuild
@@ -1,11 +1,9 @@
# Copyright 1999-2005 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/bioperl/bioperl-1.2.3.ebuild,v 1.5 2005/05/25 14:46:47 mcummings Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/bioperl/bioperl-1.2.3.ebuild,v 1.6 2005/07/09 22:57:34 swegener Exp $
inherit perl-module eutils
-CATEGORY="sci-biology"
-
DESCRIPTION="A collection of tools for bioinformatics, genomics and life science research"
HOMEPAGE="http://www.bioperl.org/"
#SRC_URI="http://www.cpan.org/modules/by-module/Bio/${P}.tar.gz"
@@ -16,8 +14,7 @@ SLOT="0"
KEYWORDS="x86"
IUSE="mysql gd"
-DEPEND="${DEPEND}
- perl-core/File-Temp
+DEPEND="perl-core/File-Temp
dev-perl/HTML-Parser
dev-perl/IO-String
dev-perl/IO-stringy
diff --git a/sci-biology/bioperl/bioperl-1.2.ebuild b/sci-biology/bioperl/bioperl-1.2.ebuild
index ed8c29d3a57b..f3a79a0b0f3a 100644
--- a/sci-biology/bioperl/bioperl-1.2.ebuild
+++ b/sci-biology/bioperl/bioperl-1.2.ebuild
@@ -1,11 +1,9 @@
# Copyright 1999-2005 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/bioperl/bioperl-1.2.ebuild,v 1.5 2005/05/25 14:47:05 mcummings Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/bioperl/bioperl-1.2.ebuild,v 1.6 2005/07/09 22:57:34 swegener Exp $
inherit perl-module debug
-CATEGORY="sci-biology"
-
DESCRIPTION="A collection of tools for bioinformatics, genomics and life science research"
HOMEPAGE="http://www.bioperl.org/"
SRC_URI="http://bioperl.org/ftp/DIST/${P}.tar.gz"
diff --git a/sci-biology/bioperl/bioperl-1.4.ebuild b/sci-biology/bioperl/bioperl-1.4.ebuild
index 5afad68f0089..0fa33f12f7ab 100644
--- a/sci-biology/bioperl/bioperl-1.4.ebuild
+++ b/sci-biology/bioperl/bioperl-1.4.ebuild
@@ -1,11 +1,9 @@
# Copyright 1999-2005 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/bioperl/bioperl-1.4.ebuild,v 1.7 2005/05/25 14:47:23 mcummings Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/bioperl/bioperl-1.4.ebuild,v 1.8 2005/07/09 22:57:34 swegener Exp $
inherit perl-module eutils
-CATEGORY="sci-biology"
-
DESCRIPTION="collection of tools for bioinformatics, genomics and life science research"
HOMEPAGE="http://www.bioperl.org/"
SRC_URI="http://www.bioperl.org/ftp/DIST/${P}.tar.bz2"
diff --git a/sci-biology/generic-genome-browser/generic-genome-browser-1.58.ebuild b/sci-biology/generic-genome-browser/generic-genome-browser-1.58.ebuild
index 4c759333f666..a247d469a056 100644
--- a/sci-biology/generic-genome-browser/generic-genome-browser-1.58.ebuild
+++ b/sci-biology/generic-genome-browser/generic-genome-browser-1.58.ebuild
@@ -1,11 +1,9 @@
# Copyright 1999-2005 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/generic-genome-browser/generic-genome-browser-1.58.ebuild,v 1.4 2005/05/24 16:00:30 mcummings Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/generic-genome-browser/generic-genome-browser-1.58.ebuild,v 1.5 2005/07/09 22:54:08 swegener Exp $
inherit perl-module
-CATEGORY="sci-biology"
-
MY_PN="Generic-Genome-Browser"
MY_P="${MY_PN}-${PV}"
@@ -45,7 +43,6 @@ DEPEND="
RDEPEND="${DEPEND}"
-
src_compile() {
cd ${S}
@@ -78,5 +75,3 @@ src_install() {
perl-module_src_install
}
-
-