summaryrefslogtreecommitdiff
diff options
context:
space:
mode:
authorAndrey Kislyuk <weaver@gentoo.org>2011-10-08 22:36:00 +0000
committerAndrey Kislyuk <weaver@gentoo.org>2011-10-08 22:36:00 +0000
commitce1a0caa02e256b7686f34ce4b7ca37de859f084 (patch)
treeceb19eb1000f30299979b6935321940ed4dfa871 /sci-biology/vcftools
parentInstall samples to /usr/share/fr0st wrt #386463 by wyvern5 (diff)
downloadhistorical-ce1a0caa02e256b7686f34ce4b7ca37de859f084.tar.gz
historical-ce1a0caa02e256b7686f34ce4b7ca37de859f084.tar.bz2
historical-ce1a0caa02e256b7686f34ce4b7ca37de859f084.zip
patch vcftools to set perl libdir properly
Package-Manager: portage-2.2.0_alpha45/cvs/Linux x86_64
Diffstat (limited to 'sci-biology/vcftools')
-rw-r--r--sci-biology/vcftools/ChangeLog5
-rw-r--r--sci-biology/vcftools/Manifest10
-rw-r--r--sci-biology/vcftools/vcftools-0.1.6.ebuild5
3 files changed, 13 insertions, 7 deletions
diff --git a/sci-biology/vcftools/ChangeLog b/sci-biology/vcftools/ChangeLog
index 6f16022dd050..d83bc61dd70b 100644
--- a/sci-biology/vcftools/ChangeLog
+++ b/sci-biology/vcftools/ChangeLog
@@ -1,6 +1,9 @@
# ChangeLog for sci-biology/vcftools
# Copyright 1999-2011 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/vcftools/ChangeLog,v 1.1 2011/10/02 20:04:57 weaver Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/vcftools/ChangeLog,v 1.2 2011/10/08 22:36:00 weaver Exp $
+
+ 08 Oct 2011; Andrey Kislyuk <weaver@gentoo.org> vcftools-0.1.6.ebuild:
+ patch vcftools to set perl libdir properly
*vcftools-0.1.6 (02 Oct 2011)
diff --git a/sci-biology/vcftools/Manifest b/sci-biology/vcftools/Manifest
index 20c540fd8b06..7cf8c5376de9 100644
--- a/sci-biology/vcftools/Manifest
+++ b/sci-biology/vcftools/Manifest
@@ -2,13 +2,13 @@
Hash: SHA1
DIST vcftools_0.1.6.tar.gz 465875 RMD160 bb45afcbfd8f5f95f4b579e0ccb874c1c8408c28 SHA1 1cdd18366e879205f194940a03d3984bb83ece8c SHA256 44a63d3ee089350f66abc3491ec0d18a959e815a816278ea93f2f424b3428077
-EBUILD vcftools-0.1.6.ebuild 774 RMD160 a186e9ec162b439c1f6c7b707eff8fc45638f75e SHA1 c9a120ae9ac3e0ac7bc6ffd22638437ecfab7ef0 SHA256 6fd12d91bc04c505f144d153397abe358f03c0abe1004923e9e4b21662981738
-MISC ChangeLog 372 RMD160 8db397f200b459e87813b5d8b78c67608ed708c2 SHA1 7be03106f3a62c633235fcad323f0af1a66cb19f SHA256 b7bb5aa0bb70a93aa2184943171dd78b4f20a6f3cc35b2a4ec124d7b1fdaa989
+EBUILD vcftools-0.1.6.ebuild 904 RMD160 e10b982f3aad2cd1fc1b2d700e8250bb156f68b3 SHA1 a2a7b71c4993fc869fd50da20afe89e407ff4296 SHA256 dac12ed837c1505cb18faf42671fa0ade5cf72da80a3d33cd9962dc6507fc49b
+MISC ChangeLog 491 RMD160 3158c81a79ae2a80300034b54bfa53ba7102b753 SHA1 4f1bc1c34e4c6958bed735f1368418e3e38fd227 SHA256 147a76e44aa28a422f6a38e5edc06776df5a1aa7172fcfc1f1cc9717a572abd0
MISC metadata.xml 259 RMD160 d9d81b67d635fabd81aef8ae0edf971211ae9072 SHA1 8e32f751c67ff891fa35405a2cf6fb33752d6eb1 SHA256 541c3fbcf299d9a8ccf4132ee61f9e53a5d737cefdaa6fdc77764d8d4c7f3110
-----BEGIN PGP SIGNATURE-----
Version: GnuPG v1.4.11 (GNU/Linux)
-iEYEARECAAYFAk6Iw+8ACgkQ8xSwyhbn2OYPxgCgqgxY3PR8pWB0HmOO1AmC0Hah
-lbsAnRjgqM4TS5KW64f+z2uN4Dl+0YBT
-=hX2f
+iEYEARECAAYFAk6Q0FYACgkQ8xSwyhbn2OZangCdFonW0g2cNkAW7YqKBKCSkcuE
+WwgAoIfPx5Hgp5O80ikmG8ktYJqgqsQq
+=mFzS
-----END PGP SIGNATURE-----
diff --git a/sci-biology/vcftools/vcftools-0.1.6.ebuild b/sci-biology/vcftools/vcftools-0.1.6.ebuild
index e8caa0fb35fc..4c4a3fa11206 100644
--- a/sci-biology/vcftools/vcftools-0.1.6.ebuild
+++ b/sci-biology/vcftools/vcftools-0.1.6.ebuild
@@ -1,6 +1,6 @@
# Copyright 1999-2011 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/vcftools/vcftools-0.1.6.ebuild,v 1.1 2011/10/02 20:04:57 weaver Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/vcftools/vcftools-0.1.6.ebuild,v 1.2 2011/10/08 22:36:00 weaver Exp $
EAPI=4
@@ -28,5 +28,8 @@ src_install(){
doins perl/*.pm
exeinto /usr/share/${PN}/perl
doexe perl/{fill,vcf}-*
+ echo 'COLON_SEPARATED=PERL5LIB' > "${S}/99${PN}"
+ echo "PERL5LIB=/usr/share/${PN}/perl" >> "${S}/99${PN}"
+ doenvd "${S}/99${PN}"
dodoc README.txt
}