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authorJustin Lecher <jlec@gentoo.org>2015-02-27 11:22:05 +0000
committerJustin Lecher <jlec@gentoo.org>2015-02-27 11:22:05 +0000
commitacba91924694ff598ce5031e80c98b17387d5bcc (patch)
tree6b1128efdf4dbb9bcc95bb6aaef084eaee74670c /sci-biology/rebase
parentStable for sparc, wrt bug #535362 (diff)
downloadhistorical-acba91924694ff598ce5031e80c98b17387d5bcc.tar.gz
historical-acba91924694ff598ce5031e80c98b17387d5bcc.tar.bz2
historical-acba91924694ff598ce5031e80c98b17387d5bcc.zip
Version Bump
Package-Manager: portage-2.2.17/cvs/Linux x86_64 Manifest-Sign-Key: 0xB9D4F231BD1558AB!
Diffstat (limited to 'sci-biology/rebase')
-rw-r--r--sci-biology/rebase/ChangeLog7
-rw-r--r--sci-biology/rebase/Manifest32
-rw-r--r--sci-biology/rebase/rebase-1503.ebuild46
3 files changed, 69 insertions, 16 deletions
diff --git a/sci-biology/rebase/ChangeLog b/sci-biology/rebase/ChangeLog
index b6b7ef7d87e8..7a01d403ce7d 100644
--- a/sci-biology/rebase/ChangeLog
+++ b/sci-biology/rebase/ChangeLog
@@ -1,6 +1,11 @@
# ChangeLog for sci-biology/rebase
# Copyright 1999-2015 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/rebase/ChangeLog,v 1.143 2015/02/02 09:11:22 jlec Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/rebase/ChangeLog,v 1.144 2015/02/27 11:22:03 jlec Exp $
+
+*rebase-1503 (27 Feb 2015)
+
+ 27 Feb 2015; Justin Lecher <jlec@gentoo.org> +rebase-1503.ebuild:
+ Version Bump
*rebase-1502 (02 Feb 2015)
diff --git a/sci-biology/rebase/Manifest b/sci-biology/rebase/Manifest
index 358737a79791..9917e97d50b1 100644
--- a/sci-biology/rebase/Manifest
+++ b/sci-biology/rebase/Manifest
@@ -4,27 +4,29 @@ Hash: SHA512
DIST rebase-1412.tar.xz 65051884 SHA256 0056bf0b7f965749aa6704012417db74003576a77fbaee393123c88fab567d49 SHA512 e96d4c003b606eddb1274aa5b9baf422bb49310e5cdeba38c2c918c571420ece300dddff431160199950079b409d5aafe5fc322a1b9aa1f2727f79e571f76fb8 WHIRLPOOL 53ceb8b4a83048d5792fa569dea98830c3ae94400759e28822df7533569d26047f85aca9b0abd861ac89a944a83fb90d224b79fc2bfce4f79ff77daeb69c1b72
DIST rebase-1501.tar.xz 66478008 SHA256 4ffba0e98524cb25389f6cb0079792a4efc1e0f95101961105ecd67209c79f94 SHA512 46656da15d297d3a58382559da16659f0c01611910cde4284ef45e3f0d181bcb7878ba32465ea154e45a3658b731d4cb2a5a25f62105a05daf284bbd78df3592 WHIRLPOOL 57fdd5ddf01842e0214f64231c9171234e7dedd06b7d1faeef996142c67bfbfa582cd0a85f0156f9f51f1c6c12e7603c2b1aba7c4edb8c6e5c11af6247b84e02
DIST rebase-1502.tar.xz 513837344 SHA256 9d579b7ea0c93a199defd94fc378871a87f1b238aacd87649a5ad3e63caa4c5b SHA512 945c884c0b940e374e47b41f53d2d24edbab3f627ac015ff6033e2fc1bab1599c20595d03c31ec60b9aaa9f25e9dad09012bfd347a152b2b2b27996e157b730a WHIRLPOOL a8b145ac4cbe2edff39fac9934d5d6d43bcf16a89988e9b5e82682911196adb33ba8681a2de65e3a6f7e136bc259476316bdb24f0e46d83ce5572effe99aaaac
+DIST rebase-1503.tar.xz 67267924 SHA256 6f808fd86bcc13f92a6ca876fa910260fc50bce50ac4bbe04e8d87cd2f9a4822 SHA512 83f2b1f0b44cb674ca99e1a5a917cd55621d6cd33d2d4d0c635af1bc958c038e6e77f5d1e2d03623010eaecb2ae88d050829797d90cb7142b83f6baace4e4d96 WHIRLPOOL 2e267cd39c626d61d33b37625c9bc56f8f83a84bfa709ac37790b90a400bf2b6e5577c34d7ced6db747dc37fb2aa72071da1e254ba185e81574eac301abd42a6
EBUILD rebase-1412.ebuild 1201 SHA256 90871577aaea008997ca6b2c806411617602c830ebe53a208ab98b70c15ad8e8 SHA512 15fb7f7c0e5078c6e75b1d96122dd091694878b469240b06ffa6d3157ed5af8edfa2e6e3e71febdce1d7081e7ec65b751b83007f7cff839c1b70d28620fb91e0 WHIRLPOOL f88be98e00587f486816de38da561042108d1b7916376f9dcf42d615f3b978e6861f2a6c05a1439898f3c2e5d29ab8198dd3ebeddfcc3ab19bbe01e20a4339c0
EBUILD rebase-1501.ebuild 1205 SHA256 6b0ef3f05ba1dd898201f40049deb9dba1e3a389fddbd0cc3da84a680272b1b5 SHA512 82ad03d83ff2f0c27213ee6918dc77534d07c52b3abbf913f0865da3d817a02fbf54d3d92af540b5959ed19c069c3212117674b23a4694219665494c89c1f24b WHIRLPOOL 37691cede8d96d53a536b5e13619e5a05bec35c0c2b50cfe2a3ce6356569507aeb301197ac3c14fce6c7e21f54a9e3e2bc6c428ff37491fa5a19379b6bc8fb20
EBUILD rebase-1502.ebuild 1205 SHA256 7b65174eacd49e9d51f8a666c73dea5f7928b133f0a4ff02537c0452d66a580e SHA512 aeb3c4e8744c095f07095013de9bb15146d592e8ccba1e0d0a940347ceecbfb99d9cfb599e7bf2ee83956e670becedd899d978423637e47d1075209b52ffec39 WHIRLPOOL e1507aa6e09fe698d355ffd74486c5fab3dce43af7d28c04fae5040c1fe37b754b76414513b2bbadc18080dbafc4bf1886bfa54b8ad2bbf6ab35f913af08ccf6
-MISC ChangeLog 18378 SHA256 5b64a5f0dddd1490bedd139ccd4c0afdf65faf6e377d63f2bffc80c987f3b05d SHA512 f02ec626489de7081cebba374133edb9d84407ff8e38569c184d4e4bb12ebf026db75c2fe3b9095a81f177d82f192d58a191af030853d8cd67cc8a8d5e276a96 WHIRLPOOL 76189bb976492b1697036ab10965d5872ba44fa0e0d9fb560e72f6e05dad9cb3f2f09ecf5ced39b2a9112bedaa58360d094ad0c9811f2ddb37a005b92ddbbfd9
+EBUILD rebase-1503.ebuild 1205 SHA256 4d342e674eeca2d57d45961809e267859f9b3f22ce997ac42aff9cd278469e2a SHA512 40ee04680fa34bd2ee6ad217c3a8fa6152780829b7a0b21d3a8b9c3b70e1f9f0377cf1bb018f01a7103eafc08e40270c50f147627e59e490ad1ff124fcf8c142 WHIRLPOOL 7055a6dcf3d00350f32dadb0a4543b1bfeab74e7f22557f40099314599533cdf76fd1bc9ffcaefac3d92b3ef9818254b5d5ffc17ed1886e1cef9304fd4204939
+MISC ChangeLog 18490 SHA256 f2a1d1f373b5552270f2677a0d675392142db958caac606735d938e96b15c9a2 SHA512 50e72f443d0142b322f86dcdd8a4e105b2214f4f2af8e136e4e520ab34f6ce5e26d48a6f8938d320b33151ee6667aeb3b6816a87702a1625f9891e09d21f9fd3 WHIRLPOOL 2a85bf84a9a7fa8a1287ed3122eb4c8acdbd821055d6b616914c3f061c840c5e89d48c9c5b6cbc6325a65513ee03c977e31258579ba65582dd296aa433bb90bd
MISC metadata.xml 813 SHA256 392179fd31cd6876ae2e2501faa8b0733704f03d0414c3668fee1f74a8462e56 SHA512 cfbd842c417a0384b17428cf36d866acbac2f89fa1496f45a908cf0d885879b2318fd21a173dc0a8ddae81c00d1c5a5646296473e199ced9028daeb004bea42a WHIRLPOOL 21c9d1a421d157ae6848a6fd99996566a3b51309e246a4aee531b0abab88698a5323d35a22430d9a21f5803402beac917f5cd295f23651f3889304bbeb65d015
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diff --git a/sci-biology/rebase/rebase-1503.ebuild b/sci-biology/rebase/rebase-1503.ebuild
new file mode 100644
index 000000000000..2193472f818d
--- /dev/null
+++ b/sci-biology/rebase/rebase-1503.ebuild
@@ -0,0 +1,46 @@
+# Copyright 1999-2015 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/rebase/rebase-1503.ebuild,v 1.1 2015/02/27 11:22:03 jlec Exp $
+
+EAPI=5
+
+MY_PV=${PV#1}
+
+DESCRIPTION="A restriction enzyme database"
+HOMEPAGE="http://rebase.neb.com"
+SRC_URI="http://dev.gentoo.org/~jlec/distfiles/${P}.tar.xz"
+
+SLOT="0"
+LICENSE="public-domain"
+KEYWORDS="~amd64 ~ppc ~x86 ~amd64-linux ~x86-linux ~ppc-macos ~sparc-solaris ~x86-solaris"
+IUSE="emboss minimal"
+
+RDEPEND="emboss? ( >=sci-biology/emboss-5.0.0 )"
+DEPEND="${RDEPEND}"
+
+RESTRICT="binchecks strip"
+
+src_compile() {
+ if use emboss; then
+ echo; einfo "Indexing Rebase for usage with EMBOSS."
+ mkdir REBASE || die
+ EMBOSS_DATA="." rebaseextract -auto -infile withrefm.${MY_PV} \
+ -protofile proto.${MY_PV} -equivalences \
+ || die "Indexing Rebase failed."
+ echo
+ fi
+}
+
+src_install() {
+ if ! use minimal; then
+ insinto /usr/share/${PN}
+ doins withrefm.${MY_PV} proto.${MY_PV}
+ fi
+ newdoc REBASE.DOC README
+ if use emboss; then
+ insinto /usr/share/EMBOSS/data/REBASE
+ doins REBASE/embossre.{enz,ref,sup}
+ insinto /usr/share/EMBOSS/data
+ doins REBASE/embossre.equ
+ fi
+}