Commenting out references to USE=mpi, which is currently broken.

Package-Manager: portage-2.1.3.15

4 files changed, 22 insertions, 20 deletions

diff --git a/sci-biology/ncbi-tools/ChangeLog b/sci-biology/ncbi-tools/ChangeLog
index a556e3b9daff..44fb907f1005 100644
--- a/sci-biology/ncbi-tools/ChangeLog
+++ b/sci-biology/ncbi-tools/ChangeLog
@@ -1,6 +1,10 @@
 # ChangeLog for sci-biology/ncbi-tools
 # Copyright 2000-2007 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/ncbi-tools/ChangeLog,v 1.55 2007/10/14 21:24:46 je_fro Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/ncbi-tools/ChangeLog,v 1.56 2007/10/19 22:22:41 je_fro Exp $
+
+  19 Oct 2007; Jeff Gardner <je_fro@gentoo.org> ncbi-tools-20070826.ebuild:
+  Commenting out any reference to USE=mpi, which is currently broken (bug
+  #196466).
 
   14 Oct 2007; Jeff Gardner <je_fro@gentoo.org> ncbi-tools-20070826.ebuild:
   Commented out a stray reference to mpi that I missed the first time.
diff --git a/sci-biology/ncbi-tools/Manifest b/sci-biology/ncbi-tools/Manifest
index fb738afb2330..7bf1ea7eaeaf 100644
--- a/sci-biology/ncbi-tools/Manifest
+++ b/sci-biology/ncbi-tools/Manifest
@@ -19,7 +19,6 @@ MD5 23986a001c85eb8c2c319aacfa9cb40c files/ncbirc 33
 RMD160 3bfa36288b608b4e29252ad1972bb8c06cded3e1 files/ncbirc 33
 SHA256 8687909c83658049cbad656b6d99c8e6143365286e2fa981fbdddc87b178ab8e files/ncbirc 33
 DIST mpiblast-20060625.tar.gz 165096 RMD160 22a9bda3ea63076c1411f8c361c7bbf84213e215 SHA1 e0acdde2770973b752396a6ba1a99b47ea4ddcde SHA256 49eb549196b306d6c152b12522ff2ca08163f4d3a2582118790c88c327c15097
-DIST mpiblast-20070826.tar.gz 286819 RMD160 7d12b92f1db7ace02066fb83a5912fe0eed2d5c2 SHA1 60fe1733ec0c68c6a4f6415dc247ad9eca479930 SHA256 80ed15b5fa115f428e5483e4c60c037d4a30d2bd1dd2c332423bb105827322a5
 DIST ncbi-tools-20050605.tar.gz 14458684 RMD160 82d3c008e9b1741e8ac286d66c1ad68693663590 SHA1 7e1ddd3f049df7c906f2681453c5e5a7b12622d8 SHA256 e0108faeb84da35da82acaa925c084fbeb455c5e571cdcaae5b02c612df46209
 DIST ncbi-tools-20060507.tar.gz 15396356 RMD160 56114d25ace0338d1ef5c8c2a3cc36ce740a12e3 SHA1 64269236b09fba29d4afe0cd8a3ac6a47fee5218 SHA256 b3cac971d552b2ad86ee7d82e77e6a425b98b33a7b6f1c77062aff133e34d129
 DIST ncbi-tools-20061015.tar.gz 15772715 RMD160 034124b92d4320be31b2bacbb0966270cbfa63b3 SHA1 4e7990e9fed1cc507d10a1b5285e51dc183d318a SHA256 0833f4b4f0389f75cdc0754329b3b8c1420c5b9abd7f3d8e352b4c134b3446de
@@ -37,14 +36,14 @@ EBUILD ncbi-tools-20061015-r1.ebuild 6495 RMD160 24ab84b6a4bce25a0571c78a5489d57
 MD5 b87146ee80dd26bf9d65078fafb9bedb ncbi-tools-20061015-r1.ebuild 6495
 RMD160 24ab84b6a4bce25a0571c78a5489d5725e81a01b ncbi-tools-20061015-r1.ebuild 6495
 SHA256 135d19e95452b5662a9751f4101ef17a66a618c3031894bb2aa8f761d64a85ad ncbi-tools-20061015-r1.ebuild 6495
-EBUILD ncbi-tools-20070826.ebuild 6688 RMD160 b5501170e6b330061092f80c093600d44e0979c1 SHA1 bf19afe26fcbcf8eb69ac30d0bdb03086618ed4a SHA256 136e38739d805f4d3ccb878635a1b7f8fcdbc76758081557854ea276a11f78a6
-MD5 e1c55cf9fe2f51cb3f36639fc43da27f ncbi-tools-20070826.ebuild 6688
-RMD160 b5501170e6b330061092f80c093600d44e0979c1 ncbi-tools-20070826.ebuild 6688
-SHA256 136e38739d805f4d3ccb878635a1b7f8fcdbc76758081557854ea276a11f78a6 ncbi-tools-20070826.ebuild 6688
-MISC ChangeLog 12479 RMD160 4a5fddb4db1a170c94996b82221012953f06c389 SHA1 e977d09e720dc951b243b646c4ae7464c787f817 SHA256 e113e4ee8ec9141ccdbfde8c6b7dc4269928c40c7678085b1cc1f55376400b50
-MD5 daa6b24b5fd2e56588ad8f11bb0e84e8 ChangeLog 12479
-RMD160 4a5fddb4db1a170c94996b82221012953f06c389 ChangeLog 12479
-SHA256 e113e4ee8ec9141ccdbfde8c6b7dc4269928c40c7678085b1cc1f55376400b50 ChangeLog 12479
+EBUILD ncbi-tools-20070826.ebuild 6692 RMD160 1fbe1feaabd9eba5f39d1cb60c49c1c2c024cfde SHA1 a137efca67772099706b721b4ccf05245bf7afc3 SHA256 fac57f3b92bc6ac9450cbb8ca4c6bb6865d29ced450656e8429a82d8609c09c6
+MD5 d4286b799fd80ed92e8c293c8df0c9c3 ncbi-tools-20070826.ebuild 6692
+RMD160 1fbe1feaabd9eba5f39d1cb60c49c1c2c024cfde ncbi-tools-20070826.ebuild 6692
+SHA256 fac57f3b92bc6ac9450cbb8ca4c6bb6865d29ced450656e8429a82d8609c09c6 ncbi-tools-20070826.ebuild 6692
+MISC ChangeLog 12642 RMD160 34d8351766c9252a92b434620bc3da8d5a154a76 SHA1 6c100b018bf7f393dd0375952da1ee27d4080d9e SHA256 8038413b387979a32fdc7fb5da52d62dece3749aed26b01c9ed2fb0996a041f7
+MD5 30bb1882a3cd22b9efc4e839584babd7 ChangeLog 12642
+RMD160 34d8351766c9252a92b434620bc3da8d5a154a76 ChangeLog 12642
+SHA256 8038413b387979a32fdc7fb5da52d62dece3749aed26b01c9ed2fb0996a041f7 ChangeLog 12642
 MISC metadata.xml 262 RMD160 4eabcbcb990d4d5e3b34db8c27bcd2c0cfcf7501 SHA1 3c024ca60a2b93ed0e0311f6b05ef5ef117bee31 SHA256 89af818a993faf14a4a87e2f254943420156c2a317c385480a9533ba682b650f
 MD5 5f35ae4b4cb1cd144db7c7c093d3fd80 metadata.xml 262
 RMD160 4eabcbcb990d4d5e3b34db8c27bcd2c0cfcf7501 metadata.xml 262
@@ -58,6 +57,6 @@ SHA256 d20530e140a48cab2fc12df5a0bf0957e956a6ea35a07b5b5ed42a43466ad4d7 files/di
 MD5 4a2b24a25719d45c6a999619053cb37c files/digest-ncbi-tools-20061015-r1 777
 RMD160 82eefb533a71585a5526c9762f9b389341863252 files/digest-ncbi-tools-20061015-r1 777
 SHA256 8dcb338c684c40627c2cfd3a425654b91b29f76804b3c14dde7e4bc4857e3031 files/digest-ncbi-tools-20061015-r1 777
-MD5 984f079788f2c7e8c7eae8c698ed8c88 files/digest-ncbi-tools-20070826 777
-RMD160 f814152cd87856cc83ee6b0b85cec3aca2774e2c files/digest-ncbi-tools-20070826 777
-SHA256 c05cc9d28eabd96628bc027e532f0ab15dd1a890ca373e0b4cfab205a8813747 files/digest-ncbi-tools-20070826 777
+MD5 e367c9b53f2aae21c7430ab487ba3afc files/digest-ncbi-tools-20070826 524
+RMD160 7f17aa60015d7c5d4b1ba8f668c8b8d7d945f81f files/digest-ncbi-tools-20070826 524
+SHA256 29693de03dce7550265261f97e3e634ab8c49c25fead9e9097c40159c339a33c files/digest-ncbi-tools-20070826 524
diff --git a/sci-biology/ncbi-tools/files/digest-ncbi-tools-20070826 b/sci-biology/ncbi-tools/files/digest-ncbi-tools-20070826
index 201e64903d63..cc637bdddb28 100644
--- a/sci-biology/ncbi-tools/files/digest-ncbi-tools-20070826
+++ b/sci-biology/ncbi-tools/files/digest-ncbi-tools-20070826
@@ -1,6 +1,3 @@
-MD5 c6e0c8429e49793bf372889f83fed06d mpiblast-20070826.tar.gz 286819
-RMD160 7d12b92f1db7ace02066fb83a5912fe0eed2d5c2 mpiblast-20070826.tar.gz 286819
-SHA256 80ed15b5fa115f428e5483e4c60c037d4a30d2bd1dd2c332423bb105827322a5 mpiblast-20070826.tar.gz 286819
 MD5 c17f7b08c12823e4320661894110dcb1 ncbi-tools-20070826.tar.gz 17076175
 RMD160 00daadd503bf729c15ada0008e305492a076fe15 ncbi-tools-20070826.tar.gz 17076175
 SHA256 58be3bb76c4a112217c414fd5d05de58a893cfd6ace3856629616a97a61ee4c8 ncbi-tools-20070826.tar.gz 17076175
diff --git a/sci-biology/ncbi-tools/ncbi-tools-20070826.ebuild b/sci-biology/ncbi-tools/ncbi-tools-20070826.ebuild
index 6662c50391cd..dc8601189005 100644
--- a/sci-biology/ncbi-tools/ncbi-tools-20070826.ebuild
+++ b/sci-biology/ncbi-tools/ncbi-tools-20070826.ebuild
@@ -1,6 +1,6 @@
 # Copyright 1999-2007 Gentoo Foundation
 # Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/ncbi-tools/ncbi-tools-20070826.ebuild,v 1.2 2007/10/14 21:24:46 je_fro Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/ncbi-tools/ncbi-tools-20070826.ebuild,v 1.3 2007/10/19 22:22:41 je_fro Exp $
 
 inherit flag-o-matic toolchain-funcs eutils autotools
 
@@ -8,8 +8,9 @@ DESCRIPTION="Development toolkit and applications for computational biology"
 LICENSE="public-domain"
 HOMEPAGE="http://www.ncbi.nlm.nih.gov/"
 SRC_URI="mirror://gentoo/${P}.tar.gz
-	doc? ( mirror://gentoo/${PN}-sdk-doc.tar.bz2 )
-	mpi? ( mirror://gentoo/mpiblast-20070826.tar.gz )"
+	doc? ( mirror://gentoo/${PN}-sdk-doc.tar.bz2 )"
+
+#	mpi? ( mirror://gentoo/mpiblast-20070826.tar.gz )
 
 SLOT="0"
 KEYWORDS="~alpha ~amd64 ~ppc ~ppc64 ~sparc ~x86"
@@ -24,9 +25,10 @@ DEPEND="app-shells/tcsh
 	dev-lang/perl
 	media-libs/libpng
 	sys-devel/pmake
-	mpi? ( virtual/mpi )
 	X? ( virtual/motif )"
 
+#	mpi? ( virtual/mpi )
+
 S="${WORKDIR}/ncbi"
 
 EXTRA_VIB="asn2all asn2asn"