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Diffstat (limited to 'sci-chemistry/pymol-plugins-caver')
-rw-r--r--sci-chemistry/pymol-plugins-caver/Manifest1
-rw-r--r--sci-chemistry/pymol-plugins-caver/metadata.xml8
-rw-r--r--sci-chemistry/pymol-plugins-caver/pymol-plugins-caver-2.1.2.ebuild56
3 files changed, 0 insertions, 65 deletions
diff --git a/sci-chemistry/pymol-plugins-caver/Manifest b/sci-chemistry/pymol-plugins-caver/Manifest
deleted file mode 100644
index 4d7abe5d823c..000000000000
--- a/sci-chemistry/pymol-plugins-caver/Manifest
+++ /dev/null
@@ -1 +0,0 @@
-DIST Caver2_1_2_pymol_plugin.zip 5698331 BLAKE2B e1accfaea6faf1e8c545b88c965228ccb62710d4015ff681506971feba6bd18a4a8b0b6e6caf621c99830ba529a6ec17873cdd3d5e52ad6dc6f67d9457e4eb87 SHA512 9d28e059bb20f30cf6a0d25ed2eb080dcf9dbb753e9d4578d95e293b31c5cf5fe23d5177dccdb79c192ab3e65bb484b6eb22b26c267637b125404f871e01a52c
diff --git a/sci-chemistry/pymol-plugins-caver/metadata.xml b/sci-chemistry/pymol-plugins-caver/metadata.xml
deleted file mode 100644
index 8937bad0b175..000000000000
--- a/sci-chemistry/pymol-plugins-caver/metadata.xml
+++ /dev/null
@@ -1,8 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
-<pkgmetadata>
- <maintainer type="project">
- <email>sci-chemistry@gentoo.org</email>
- <name>Gentoo Chemistry Project</name>
- </maintainer>
-</pkgmetadata>
diff --git a/sci-chemistry/pymol-plugins-caver/pymol-plugins-caver-2.1.2.ebuild b/sci-chemistry/pymol-plugins-caver/pymol-plugins-caver-2.1.2.ebuild
deleted file mode 100644
index e189f885dcc5..000000000000
--- a/sci-chemistry/pymol-plugins-caver/pymol-plugins-caver-2.1.2.ebuild
+++ /dev/null
@@ -1,56 +0,0 @@
-# Copyright 1999-2019 Gentoo Authors
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=5
-
-PYTHON_COMPAT=( python2_7 )
-
-inherit multilib python-r1 eutils versionator java-utils-2
-
-MY_PV="$(replace_all_version_separators _)"
-MY_P="Caver${MY_PV}_pymol_plugin"
-
-DESCRIPTION="Calculation of pathways of proteins from buried cavities to outside solvent"
-HOMEPAGE="http://loschmidt.chemi.muni.cz/caver/"
-SRC_URI="${MY_P}.zip"
-
-LICENSE="CAVER"
-SLOT="0"
-KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux"
-IUSE=""
-REQUIRED_USE="${PYTHON_REQUIRED_USE}"
-
-RDEPEND="
- >=virtual/jre-1.6
- sci-chemistry/pymol[${PYTHON_USEDEP}]
- ${PYTHON_DEPS}"
-DEPEND="app-arch/unzip
- ${PYTHON_DEPS}"
-
-RESTRICT="bindist fetch"
-
-S="${WORKDIR}/${MY_P}"/linux_mac
-
-pkg_nofetch() {
- elog "Download ${A}"
- elog "from ${HOMEPAGE}. This requires registration."
- elog "Place tarballs into your DISTDIR directory."
-}
-
-src_install() {
- java-pkg_dojar Caver${MY_PV}/*.jar
-
- java-pkg_jarinto /usr/share/${PN}/lib/lib/
- java-pkg_dojar Caver${MY_PV}/lib/*.jar
-
- installation() {
- sed \
- -e "s:directory/where/jar/with/plugin/is/located:${EPREFIX}/usr/share/${PN}/lib/:g" \
- -i Caver${MY_PV}.py || die
-
- python_moduleinto pmg_tk/startup/
- python_domodule Caver${MY_PV}.py
- python_optimize
- }
- python_foreach_impl installation
-}