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Diffstat (limited to 'sci-biology/express/express-1.5.1.ebuild')
-rw-r--r-- | sci-biology/express/express-1.5.1.ebuild | 37 |
1 files changed, 37 insertions, 0 deletions
diff --git a/sci-biology/express/express-1.5.1.ebuild b/sci-biology/express/express-1.5.1.ebuild new file mode 100644 index 000000000000..231b1f878ba3 --- /dev/null +++ b/sci-biology/express/express-1.5.1.ebuild @@ -0,0 +1,37 @@ +# Copyright 1999-2014 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Id$ + +EAPI=5 + +inherit cmake-utils + +DESCRIPTION="Streaming RNA-Seq Analysis" +HOMEPAGE="http://bio.math.berkeley.edu/eXpress/" +SRC_URI="http://bio.math.berkeley.edu/eXpress/downloads/${P}/${P}-src.tgz" + +LICENSE="Artistic" +SLOT="0" +KEYWORDS="~amd64 ~x86" +IUSE="" + +DEPEND=" + >=dev-libs/boost-1.52.0:= + dev-libs/protobuf + dev-util/google-perftools + sys-libs/zlib + sci-biology/bamtools" +RDEPEND="${DEPEND}" + +S="${WORKDIR}/${P}-src" + +PATCHES=( + "${FILESDIR}"/${P}-buildsystem.patch +) + +src_configure() { + local mycmakeargs=( + -DBAMTOOLS_INCLUDE="${EPREFIX}/usr/include/bamtools" + ) + cmake-utils_src_configure +} |