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author | Andreas Sturmlechner <asturm@gentoo.org> | 2019-06-15 21:42:00 +0200 |
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committer | Andreas Sturmlechner <asturm@gentoo.org> | 2019-06-15 22:56:08 +0200 |
commit | df2c62a10c80eb73d5c12bf143ae1c2c2321d980 (patch) | |
tree | 9033d43391dbfba8be98aeb609cc951d2e72b975 /sci-libs | |
parent | dev-python/pytables: Drop 3.3.0 and 3.4.2 (diff) | |
download | gentoo-df2c62a10c80eb73d5c12bf143ae1c2c2321d980.tar.gz gentoo-df2c62a10c80eb73d5c12bf143ae1c2c2321d980.tar.bz2 gentoo-df2c62a10c80eb73d5c12bf143ae1c2c2321d980.zip |
sci-libs/hdf5: Drop 1.8.18 and 1.10.1
Package-Manager: Portage-2.3.67, Repoman-2.3.14
Signed-off-by: Andreas Sturmlechner <asturm@gentoo.org>
Diffstat (limited to 'sci-libs')
-rw-r--r-- | sci-libs/hdf5/Manifest | 2 | ||||
-rw-r--r-- | sci-libs/hdf5/files/hdf5-1.8.15-implicits.patch | 43 | ||||
-rw-r--r-- | sci-libs/hdf5/hdf5-1.10.1.ebuild | 95 | ||||
-rw-r--r-- | sci-libs/hdf5/hdf5-1.8.18.ebuild | 111 | ||||
-rw-r--r-- | sci-libs/hdf5/metadata.xml | 5 |
5 files changed, 1 insertions, 255 deletions
diff --git a/sci-libs/hdf5/Manifest b/sci-libs/hdf5/Manifest index e8b5dd2438ce..64df5831a55d 100644 --- a/sci-libs/hdf5/Manifest +++ b/sci-libs/hdf5/Manifest @@ -1,3 +1 @@ -DIST hdf5-1.10.1.tar.bz2 11769617 BLAKE2B 66ad762aed90cea9e58a9735bf0e189d78befc40cac0e566586e967f2b3ba6f5bf8a6bfd12a2f4062f8b20900c16d467c34134c17dedfd8f345cb96bd853a2fe SHA512 266b0e2f28c5fd540099a4955244ddb8c03aca3ad40d626358643f033a6ae5e9266a1d6c1d60925c7d42d24d28a1549d3305fe8ddb42cec2379af7231b93e554 DIST hdf5-1.10.5.tar.bz2 8706317 BLAKE2B ac326be8fe4ccc4b0153f15bc7d65aa8f1adc2ae279d3980f57ed46722b754d3f36ecf1d6273c75e80ed1afd4bbf10c6b1c5d9408e1f83a4b2e397e7902a7d3c SHA512 769e43b8672e26fe24ed68da0228c010d3d9bc950ca09f0bc60707911a2f26f2f8415c8abc8ec06e07667148d8cdb3b0c7b3e7860d9b19739629c5dfd5ce73d4 -DIST hdf5-1.8.18.tar.bz2 10081294 BLAKE2B cf0d0c8a41576bcf816460eaabcfab29cfffba240721a64fe584c42fbb322470f29fb93c8513f7bbdedeeb392c2fe64cd3261b47b47de5b01828dae0b1929cd3 SHA512 01f6d14bdd3be2ced9c63cc9e1820cd7ea11db649ff9f3a3055c18c4b0fffe777fd23baad536e3bce31c4d76fe17db64a3972762e1bb4d232927c1ca140e72b2 diff --git a/sci-libs/hdf5/files/hdf5-1.8.15-implicits.patch b/sci-libs/hdf5/files/hdf5-1.8.15-implicits.patch deleted file mode 100644 index 72e096170975..000000000000 --- a/sci-libs/hdf5/files/hdf5-1.8.15-implicits.patch +++ /dev/null @@ -1,43 +0,0 @@ ---- a/hl/src/H5LTanalyze.c -+++ b/hl/src/H5LTanalyze.c -@@ -40,6 +40,7 @@ - #include <string.h> - #include <errno.h> - #include <stdlib.h> -+#include <unistd.h> - - /* end standard C headers. */ - ---- a/hl/src/H5LTanalyze.l -+++ b/hl/src/H5LTanalyze.l -@@ -16,6 +16,7 @@ - %{ - #include <stdlib.h> - #include <string.h> -+#include <unistd.h> - #include <hdf5.h> - #include "H5LTparse.h" - ---- a/test/cache_common.h -+++ b/test/cache_common.h -@@ -702,5 +702,8 @@ void validate_mdc_config(hid_t file_id, - hbool_t compare_init, - int test_num); - -+hbool_t resize_configs_are_equal(const H5C_auto_size_ctl_t *a, -+ const H5C_auto_size_ctl_t *b, -+ hbool_t compare_init); - #endif /* _CACHE_COMMON_H */ - ---- a/testpar/t_span_tree.c -+++ b/testpar/t_span_tree.c -@@ -37,6 +37,9 @@ - #include "hdf5.h" - #include "H5private.h" - #include "testphdf5.h" -+#define H5S_PACKAGE -+#define H5S_TESTING -+#include "H5Spkg.h" - - - static void coll_write_test(int chunk_factor); diff --git a/sci-libs/hdf5/hdf5-1.10.1.ebuild b/sci-libs/hdf5/hdf5-1.10.1.ebuild deleted file mode 100644 index 6cf18a83be0f..000000000000 --- a/sci-libs/hdf5/hdf5-1.10.1.ebuild +++ /dev/null @@ -1,95 +0,0 @@ -# Copyright 1999-2017 Gentoo Foundation -# Distributed under the terms of the GNU General Public License v2 - -EAPI=5 - -FORTRAN_NEEDED=fortran -AUTOTOOLS_AUTORECONF=1 - -inherit autotools-utils eutils fortran-2 flag-o-matic toolchain-funcs multilib versionator prefix - -MY_P=${PN}-${PV/_p/-patch} -MAJOR_P=${PN}-$(get_version_component_range 1-2 ${PV}) - -DESCRIPTION="General purpose library and file format for storing scientific data" -HOMEPAGE="http://www.hdfgroup.org/HDF5/" -SRC_URI="http://www.hdfgroup.org/ftp/HDF5/releases/${MAJOR_P}/${MY_P}/src/${MY_P}.tar.bz2" - -LICENSE="NCSA-HDF" -SLOT="0/${PV%%_p*}" -KEYWORDS="~alpha ~amd64 ~arm ~arm64 ~ia64 ~ppc ~ppc64 ~sparc ~x86 ~x86-fbsd ~amd64-linux ~x86-linux" -IUSE="cxx debug examples fortran +hl mpi static-libs szip threads zlib" - -REQUIRED_USE=" - cxx? ( !mpi ) mpi? ( !cxx ) - threads? ( !cxx !mpi !fortran !hl )" - -RDEPEND=" - mpi? ( virtual/mpi[romio] ) - szip? ( virtual/szip ) - zlib? ( sys-libs/zlib:0= )" - -DEPEND="${RDEPEND} - sys-devel/libtool:2 - >=sys-devel/autoconf-2.69" - -S="${WORKDIR}/${MY_P}" - -PATCHES=( - "${FILESDIR}"/${PN}-1.8.9-static_libgfortran.patch - "${FILESDIR}"/${PN}-1.8.9-mpicxx.patch - "${FILESDIR}"/${PN}-1.8.13-no-messing-ldpath.patch -) - -pkg_setup() { - tc-export CXX CC AR # workaround for bug 285148 - use fortran && fortran-2_pkg_setup - - if use mpi; then - if has_version 'sci-libs/hdf5[-mpi]'; then - ewarn "Installing hdf5 with mpi enabled with a previous hdf5 with mpi disabled may fail." - ewarn "Try to uninstall the current hdf5 prior to enabling mpi support." - fi - export CC=mpicc - use fortran && export FC=mpif90 - elif has_version 'sci-libs/hdf5[mpi]'; then - ewarn "Installing hdf5 with mpi disabled while having hdf5 installed with mpi enabled may fail." - ewarn "Try to uninstall the current hdf5 prior to disabling mpi support." - fi -} - -src_prepare() { - # respect gentoo examples directory - sed \ - -e "s:hdf5_examples:doc/${PF}/examples:g" \ - -i $(find . -name Makefile.am) $(find . -name "run*.sh.in") || die - sed \ - -e '/docdir/d' \ - -i config/commence.am || die - if ! use examples; then - sed -e '/^install:/ s/install-examples//' \ - -i Makefile.am || die #409091 - fi - # enable shared libs by default for h5cc config utility - sed -i -e "s/SHLIB:-no/SHLIB:-yes/g" tools/src/misc/h5cc.in || die - hprefixify m4/libtool.m4 - autotools-utils_src_prepare -} - -src_configure() { - local myeconfargs=( - --docdir="${EPREFIX}"/usr/share/doc/${PF} - --enable-deprecated-symbols - $(use debug && echo --enable-build-mode=debug || echo --enable-build-mode=production) - $(use_enable debug codestack) - $(use_enable cxx) - $(use_enable fortran) - $(use_enable hl) - $(use_enable mpi parallel) - $(use_enable threads threadsafe) - $(use_with szip szlib) - $(use_with threads pthread) - $(use_with zlib) - ) - autotools-utils_src_configure -} diff --git a/sci-libs/hdf5/hdf5-1.8.18.ebuild b/sci-libs/hdf5/hdf5-1.8.18.ebuild deleted file mode 100644 index 4057134a614e..000000000000 --- a/sci-libs/hdf5/hdf5-1.8.18.ebuild +++ /dev/null @@ -1,111 +0,0 @@ -# Copyright 1999-2017 Gentoo Foundation -# Distributed under the terms of the GNU General Public License v2 - -EAPI=5 - -FORTRAN_NEEDED=fortran -AUTOTOOLS_AUTORECONF=1 - -inherit autotools-utils eutils fortran-2 flag-o-matic toolchain-funcs multilib - -MY_P=${PN}-${PV/_p/-patch} - -DESCRIPTION="General purpose library and file format for storing scientific data" -HOMEPAGE="http://www.hdfgroup.org/HDF5/" -#SRC_URI="https://support.hdfgroup.org/ftp/HDF5/releases/${MY_P}/src/${MY_P}.tar.bz2" -# TODO: return to proper SRC_URI once upstream fixes their release -SRC_URI="https://support.hdfgroup.org/ftp/HDF5/current18/src/${MY_P}.tar.bz2" - -LICENSE="NCSA-HDF" -SLOT="0/${PV%%_p*}" -KEYWORDS="alpha amd64 ~arm ~arm64 ia64 ppc ppc64 sparc x86 ~x86-fbsd ~amd64-linux ~x86-linux" -IUSE="cxx debug examples fortran fortran2003 +hl mpi static-libs szip threads zlib" - -REQUIRED_USE=" - threads? ( !cxx !mpi !fortran !hl ) - fortran2003? ( fortran )" - -RDEPEND=" - mpi? ( virtual/mpi[romio] ) - szip? ( virtual/szip ) - zlib? ( sys-libs/zlib:0= )" - -DEPEND="${RDEPEND} - sys-devel/libtool:2 - >=sys-devel/autoconf-2.69" - -S="${WORKDIR}/${MY_P}" - -PATCHES=( - "${FILESDIR}"/${PN}-1.8.9-static_libgfortran.patch - "${FILESDIR}"/${PN}-1.8.9-mpicxx.patch - "${FILESDIR}"/${PN}-1.8.13-no-messing-ldpath.patch - "${FILESDIR}"/${PN}-1.8.15-implicits.patch -) - -pkg_setup() { - tc-export CXX CC AR # workaround for bug 285148 - if use fortran; then - use fortran2003 && FORTRAN_STANDARD=2003 - fortran-2_pkg_setup - fi - if use mpi; then - if has_version 'sci-libs/hdf5[-mpi]'; then - ewarn "Installing hdf5 with mpi enabled with a previous hdf5 with mpi disabled may fail." - ewarn "Try to uninstall the current hdf5 prior to enabling mpi support." - fi - export CC=mpicc - use fortran && export FC=mpif90 - if use cxx ; then - export CXX=mpicxx - ewarn "USE='mpi cxx' requires a configuration unsupported by upstream. Use at your own risk." - ewarn "In particular, the C++ API is not parallel safe." - fi - elif has_version 'sci-libs/hdf5[mpi]'; then - ewarn "Installing hdf5 with mpi disabled while having hdf5 installed with mpi enabled may fail." - ewarn "Try to uninstall the current hdf5 prior to disabling mpi support." - fi -} - -src_prepare() { - # respect gentoo examples directory - sed \ - -e "s:hdf5_examples:doc/${PF}/examples:g" \ - -i $(find . -name Makefile.am) $(find . -name "run*.sh.in") || die - sed \ - -e '/docdir/d' \ - -i config/commence.am || die - if ! use examples; then - sed -e '/^install:/ s/install-examples//' \ - -i Makefile.am || die #409091 - fi - # enable shared libs by default for h5cc config utility - sed -i -e "s/SHLIB:-no/SHLIB:-yes/g" tools/misc/h5cc.in || die - # bug #419677 - use prefix && \ - append-ldflags -Wl,-rpath,"${EPREFIX}"/usr/$(get_libdir) \ - -Wl,-rpath,"${EPREFIX}"/$(get_libdir) - autotools-utils_src_prepare -} - -src_configure() { - local myeconfargs=( - --enable-production - --docdir="${EPREFIX}"/usr/share/doc/${PF} - --enable-deprecated-symbols - $(use_enable prefix sharedlib-rpath) - $(use_enable debug debug all) - $(use_enable debug codestack) - $(use_enable cxx) - $(use_enable fortran) - $(use_enable fortran2003) - $(use_enable hl) - $(use_enable mpi parallel) - $(use_enable threads threadsafe) - $(use_with szip szlib) - $(use_with threads pthread) - $(use_with zlib) - $(use mpi && use cxx && echo --enable-unsupported) - ) - autotools-utils_src_configure -} diff --git a/sci-libs/hdf5/metadata.xml b/sci-libs/hdf5/metadata.xml index 9c9d5071aa84..040542a30ae7 100644 --- a/sci-libs/hdf5/metadata.xml +++ b/sci-libs/hdf5/metadata.xml @@ -12,9 +12,6 @@ than 2 GB, and supports parallel I/O. </longdescription> <use> - <flag name="fortran2003">Enable new features that require Fortran 2003 - (http://www.hdfgroup.org/HDF5/doc/fortran/NewFeatures_F2003.pdf)</flag> - <flag name="hl">Enable high level API - (https://support.hdfgroup.org/HDF5/doc/HL/index.html)</flag> + <flag name="hl">Enable high level API (https://support.hdfgroup.org/HDF5/doc/HL/index.html)</flag> </use> </pkgmetadata> |