diff options
author | Aaron Bauman <bman@gentoo.org> | 2020-07-27 22:33:32 -0400 |
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committer | Aaron Bauman <bman@gentoo.org> | 2020-07-27 22:33:32 -0400 |
commit | f63396228c129fdbac0b2b6bf90ca0dbe64bfb08 (patch) | |
tree | 7f870e5b96903f3fd9ebe72e4da5188f7092f94d /sci-chemistry | |
parent | app-misc/OpenRGB-0.3-r1: Revbump, add udev USE flag to install udev rules (diff) | |
download | gentoo-f63396228c129fdbac0b2b6bf90ca0dbe64bfb08.tar.gz gentoo-f63396228c129fdbac0b2b6bf90ca0dbe64bfb08.tar.bz2 gentoo-f63396228c129fdbac0b2b6bf90ca0dbe64bfb08.zip |
*/*: Drop last-rited Py2 only pkgs
Bug: https://bugs.gentoo.org/616064
Closes: https://bugs.gentoo.org/721904
Closes: https://bugs.gentoo.org/609686
Closes: https://bugs.gentoo.org/695016
Closes: https://bugs.gentoo.org/722616
Closes: https://bugs.gentoo.org/684098
Closes: https://bugs.gentoo.org/672164
Closes: https://bugs.gentoo.org/699136
Closes: https://bugs.gentoo.org/690776
Closes: https://bugs.gentoo.org/695912
Closes: https://bugs.gentoo.org/697004
Closes: https://bugs.gentoo.org/711026
Signed-off-by: Aaron Bauman <bman@gentoo.org>
Diffstat (limited to 'sci-chemistry')
-rw-r--r-- | sci-chemistry/bkchem/Manifest | 1 | ||||
-rw-r--r-- | sci-chemistry/bkchem/bkchem-0.14.0_pre2-r2.ebuild | 40 | ||||
-rw-r--r-- | sci-chemistry/bkchem/files/bkchem-0.14.0_pre2-nolauncher.patch | 106 | ||||
-rw-r--r-- | sci-chemistry/bkchem/metadata.xml | 8 | ||||
-rw-r--r-- | sci-chemistry/pymol-plugins-bni-tools/Manifest | 1 | ||||
-rw-r--r-- | sci-chemistry/pymol-plugins-bni-tools/metadata.xml | 11 | ||||
-rw-r--r-- | sci-chemistry/pymol-plugins-bni-tools/pymol-plugins-bni-tools-0.27.ebuild | 37 | ||||
-rw-r--r-- | sci-chemistry/pymol-plugins-emovie/Manifest | 1 | ||||
-rw-r--r-- | sci-chemistry/pymol-plugins-emovie/files/1.0.4-indent.patch | 22 | ||||
-rw-r--r-- | sci-chemistry/pymol-plugins-emovie/metadata.xml | 8 | ||||
-rw-r--r-- | sci-chemistry/pymol-plugins-emovie/pymol-plugins-emovie-1.0.4.ebuild | 35 | ||||
-rw-r--r-- | sci-chemistry/viewmol/Manifest | 1 | ||||
-rw-r--r-- | sci-chemistry/viewmol/files/2.4.1-change-default-paths.patch | 68 | ||||
-rw-r--r-- | sci-chemistry/viewmol/files/2.4.1-remove-icc-check.patch | 22 | ||||
-rw-r--r-- | sci-chemistry/viewmol/metadata.xml | 11 | ||||
-rw-r--r-- | sci-chemistry/viewmol/viewmol-2.4.1-r3.ebuild | 89 |
16 files changed, 0 insertions, 461 deletions
diff --git a/sci-chemistry/bkchem/Manifest b/sci-chemistry/bkchem/Manifest deleted file mode 100644 index dd4ad7bdb9bd..000000000000 --- a/sci-chemistry/bkchem/Manifest +++ /dev/null @@ -1 +0,0 @@ -DIST bkchem-0.14.0-pre2.tar.gz 998916 BLAKE2B 07c01abb31325c3721cc478438c1b34f156bc589a186eeedd62b6ac058f8ec64b1ea86a3c25bb6ab8045e0aaa838f10c5d16b68516fdea5607795b64fb4c39bb SHA512 7fc3bbd7bfe27bc91cf69a98c347a3fb92f4ea25b45a13debd0646a6b02d7a40c5729ae1b2a9ac33c1049d6b90e38355c3cd80e06660a0a2fcc5dafb3514ef20 diff --git a/sci-chemistry/bkchem/bkchem-0.14.0_pre2-r2.ebuild b/sci-chemistry/bkchem/bkchem-0.14.0_pre2-r2.ebuild deleted file mode 100644 index d6162080214b..000000000000 --- a/sci-chemistry/bkchem/bkchem-0.14.0_pre2-r2.ebuild +++ /dev/null @@ -1,40 +0,0 @@ -# Copyright 1999-2018 Gentoo Foundation -# Distributed under the terms of the GNU General Public License v2 - -EAPI=5 - -PYTHON_COMPAT=( python2_7 ) - -PYTHON_REQ_USE="tk" - -inherit distutils-r1 eutils versionator - -MY_P="${PN}-$(replace_version_separator 3 -)" - -DESCRIPTION="Chemical drawing program" -HOMEPAGE="http://bkchem.zirael.org/" -SRC_URI="http://bkchem.zirael.org/download/${MY_P}.tar.gz" - -SLOT="0" -KEYWORDS="~amd64 ~x86" -LICENSE="GPL-2" -IUSE="cairo" - -DEPEND="cairo? ( dev-python/pycairo[${PYTHON_USEDEP}] )" -RDEPEND="${DEPEND}" - -S="${WORKDIR}"/${MY_P} - -PATCHES=( - "${FILESDIR}"/${P}-nolauncher.patch -) - -python_install() { - distutils-r1_python_install "--strip=${ED}/_${EPYTHON}" -} - -python_install_all() { - distutils-r1_python_install_all - python_foreach_impl python_newscript ${PN}/${PN}.py ${PN} - make_desktop_entry bkchem BKChem "${EPREFIX}"/usr/share/${PN}/images/${PN}.png Science -} diff --git a/sci-chemistry/bkchem/files/bkchem-0.14.0_pre2-nolauncher.patch b/sci-chemistry/bkchem/files/bkchem-0.14.0_pre2-nolauncher.patch deleted file mode 100644 index 202c47a9c74f..000000000000 --- a/sci-chemistry/bkchem/files/bkchem-0.14.0_pre2-nolauncher.patch +++ /dev/null @@ -1,106 +0,0 @@ - bkchem/bkchem.py | 24 +++++++++++++----------- - setup.py | 23 ----------------------- - 2 files changed, 13 insertions(+), 34 deletions(-) - -diff --git a/bkchem/bkchem.py b/bkchem/bkchem.py -index b336b9c..bcb68b0 100644 ---- a/bkchem/bkchem.py -+++ b/bkchem/bkchem.py -@@ -1,3 +1,4 @@ -+#!/usr/bin/env python2 - #-------------------------------------------------------------------------- - # This file is part of BKChem - a chemical drawing program - # Copyright (C) 2002-2009 Beda Kosata <beda@zirael.org> -@@ -18,18 +19,19 @@ - #-------------------------------------------------------------------------- - - --"""this is just a starter of the application""" -+#"""this is just a starter of the application""" - - ## support for loading from outside of bkchem dir - --import os_support, sys -+from bkchem import os_support -+import sys - sys.path.insert( 1, os_support.get_module_path()) - - - ### now starting for real - --from singleton_store import Store --import pref_manager -+from bkchem.singleton_store import Store -+from bkchem import pref_manager - - # at first preference manager - Store.pm = pref_manager.pref_manager( -@@ -78,13 +80,13 @@ else: - - - --import config -+from bkchem import config - - if not config.debug: - # checking of important modules availability - # import modules -- import import_checker -- import messages -+ from bkchem import import_checker -+ from bkchem import messages - - # we need sets from the 2.3 version - if not import_checker.python_version_ok: -@@ -103,16 +105,16 @@ if not config.debug: - - - #import Tkinter --from main import BKChem --from splash import Splash --from singleton_store import Store -+from bkchem.main import BKChem -+from bkchem.splash import Splash -+from bkchem.singleton_store import Store - - myapp = BKChem() - myapp.withdraw() - - if __name__ == '__main__': - -- import messages -+ from bkchem import messages - enc = sys.getfilesystemencoding() - if not enc: - enc = sys.getdefaultencoding() -diff --git a/setup.py b/setup.py -index d4b2a21..2319216 100755 ---- a/setup.py -+++ b/setup.py -@@ -91,26 +91,3 @@ if len( sys.argv) > 1 and sys.argv[1] == 'install' and '--help' not in sys.argv: - print "file %s created" % config_name - - -- # the executable -- if not os.path.isdir( bin_dir): -- try: -- os.mkdir( bin_dir) -- except: -- print "ERROR: could not create directory %s" % bin_dir -- sys.exit( 201) -- exec_name = os.path.join( bin_dir, 'bkchem') -- try: -- file = open( exec_name, 'w') -- except: -- print "ERROR: couldn't open the file %s for write" % exec_name -- sys.exit( 201) -- file.write( "#!/bin/sh\n") -- file.write( 'python %s "$@"\n' % strip_path( os.path.join( py_dir, "bkchem", "bkchem.py"))) -- file.close() -- print "file %s created" % exec_name -- try: -- os.chmod( os.path.join( bin_dir, 'bkchem'), 5+5*8+7*8*8) -- except: -- print "ERROR: failed to make %s executable" % exec_name -- sys.exit( 201) -- print "file %s made executable" % exec_name diff --git a/sci-chemistry/bkchem/metadata.xml b/sci-chemistry/bkchem/metadata.xml deleted file mode 100644 index 8937bad0b175..000000000000 --- a/sci-chemistry/bkchem/metadata.xml +++ /dev/null @@ -1,8 +0,0 @@ -<?xml version="1.0" encoding="UTF-8"?> -<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> -<pkgmetadata> - <maintainer type="project"> - <email>sci-chemistry@gentoo.org</email> - <name>Gentoo Chemistry Project</name> - </maintainer> -</pkgmetadata> diff --git a/sci-chemistry/pymol-plugins-bni-tools/Manifest b/sci-chemistry/pymol-plugins-bni-tools/Manifest deleted file mode 100644 index 808e9258c6b2..000000000000 --- a/sci-chemistry/pymol-plugins-bni-tools/Manifest +++ /dev/null @@ -1 +0,0 @@ -DIST bni-tools-027.zip 33753 BLAKE2B 3cf52b42709c0e08879b7f3174ab6e7fd6c052a2827a0ee6d102fa16f30a985d7ff766abc6dc27595973a1f6151f684e97b34da981196c411fdac178499f9a51 SHA512 9c0ef1ca5bbb3040192ab2668f354f947e93d42c91a0cfdde5d05be273e6ba9f29ec3c6ee86367f18d87316282b4e0141183b8d6259bd36d44010b7bbb7666e5 diff --git a/sci-chemistry/pymol-plugins-bni-tools/metadata.xml b/sci-chemistry/pymol-plugins-bni-tools/metadata.xml deleted file mode 100644 index 0f732a212193..000000000000 --- a/sci-chemistry/pymol-plugins-bni-tools/metadata.xml +++ /dev/null @@ -1,11 +0,0 @@ -<?xml version="1.0" encoding="UTF-8"?> -<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> -<pkgmetadata> - <maintainer type="project"> - <email>sci-chemistry@gentoo.org</email> - <name>Gentoo Chemistry Project</name> - </maintainer> - <upstream> - <remote-id type="sourceforge">bni-tools</remote-id> - </upstream> -</pkgmetadata> diff --git a/sci-chemistry/pymol-plugins-bni-tools/pymol-plugins-bni-tools-0.27.ebuild b/sci-chemistry/pymol-plugins-bni-tools/pymol-plugins-bni-tools-0.27.ebuild deleted file mode 100644 index 1de68c64d64f..000000000000 --- a/sci-chemistry/pymol-plugins-bni-tools/pymol-plugins-bni-tools-0.27.ebuild +++ /dev/null @@ -1,37 +0,0 @@ -# Copyright 1999-2017 Gentoo Foundation -# Distributed under the terms of the GNU General Public License v2 - -EAPI=5 - -PYTHON_COMPAT=( python2_7 ) - -inherit python-r1 versionator - -MY_PN="${PN#pymol-plugins-}" -MY_P="${MY_PN}-$(delete_version_separator 1)" -MY_P_DOT="${MY_PN}-${PV}" - -DESCRIPTION="Gives Pymol additional functionalities and presets to the PyMOL GUI" -HOMEPAGE="http://bni-tools.sourceforge.net/" -SRC_URI="mirror://sourceforge/${MY_PN}/${MY_PN}/${MY_P_DOT}/${MY_P}.zip" - -LICENSE="CNRI" -SLOT="0" -KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux" -IUSE="" -REQUIRED_USE="${PYTHON_REQUIRED_USE}" - -RDEPEND="${PYTHON_DEPS} - sci-chemistry/pymol[${PYTHON_USEDEP}]" -DEPEND="${PYTHON_DEPS} - app-arch/unzip" - -S="${WORKDIR}" - -src_install() { - python_moduleinto pmg_tk/startup - python_foreach_impl python_domodule bni-tools.py - python_foreach_impl python_optimize - dodoc readme.txt - dohtml ShortCommandDescription.html -} diff --git a/sci-chemistry/pymol-plugins-emovie/Manifest b/sci-chemistry/pymol-plugins-emovie/Manifest deleted file mode 100644 index d6a95f63f57c..000000000000 --- a/sci-chemistry/pymol-plugins-emovie/Manifest +++ /dev/null @@ -1 +0,0 @@ -DIST eMovie_package.zip 22840 BLAKE2B 593548d5f940432cbf71580410fba01bcf54f884d6ac1a726a0ce65a7efa4d90c283985f81b5348eadaf54f497a32e1d478ca803cb0fbdacd7bfde30b939d864 SHA512 5d4af5f8bd6e7e0f24f33d769925bd0444389b1c0fbdd14776f4073fd3e1e818c4623791bcb0cff5496729dc55e0429c48c3c16cb5fdbb91c51f9c5445c7afe4 diff --git a/sci-chemistry/pymol-plugins-emovie/files/1.0.4-indent.patch b/sci-chemistry/pymol-plugins-emovie/files/1.0.4-indent.patch deleted file mode 100644 index a9a77e5055dd..000000000000 --- a/sci-chemistry/pymol-plugins-emovie/files/1.0.4-indent.patch +++ /dev/null @@ -1,22 +0,0 @@ -diff --git a/eMovie.py b/eMovie.py -index a865732..8b5b068 100644 ---- a/eMovie.py -+++ b/eMovie.py -@@ -931,7 +931,7 @@ class Story(tkSimpleDialog.Dialog): - - if self.parent is not None: - self.geometry("+%d+%d" % (parent.winfo_rootx()+50,parent.winfo_rooty()+50)) -- self.initial_focus.focus_set() -+ self.initial_focus.focus_set() - - self.wait_window(self) - -@@ -2041,7 +2041,7 @@ class AddMorph(tkSimpleDialog.Dialog): - - if self.parent is not None: - self.geometry("+%d+%d" % (parent.winfo_rootx()+50,parent.winfo_rooty()+50)) -- self.initial_focus.focus_set() -+ self.initial_focus.focus_set() - - self.wait_window(self) - diff --git a/sci-chemistry/pymol-plugins-emovie/metadata.xml b/sci-chemistry/pymol-plugins-emovie/metadata.xml deleted file mode 100644 index da36ecbfcd6a..000000000000 --- a/sci-chemistry/pymol-plugins-emovie/metadata.xml +++ /dev/null @@ -1,8 +0,0 @@ -<?xml version="1.0" encoding="UTF-8"?> -<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> -<pkgmetadata> - <maintainer type="project"> - <email>sci-chemistry@gentoo.org</email> - <name>Gentoo Chemistry Project</name> - </maintainer> -</pkgmetadata> diff --git a/sci-chemistry/pymol-plugins-emovie/pymol-plugins-emovie-1.0.4.ebuild b/sci-chemistry/pymol-plugins-emovie/pymol-plugins-emovie-1.0.4.ebuild deleted file mode 100644 index e7b2eb7d4771..000000000000 --- a/sci-chemistry/pymol-plugins-emovie/pymol-plugins-emovie-1.0.4.ebuild +++ /dev/null @@ -1,35 +0,0 @@ -# Copyright 1999-2020 Gentoo Authors -# Distributed under the terms of the GNU General Public License v2 - -EAPI=5 - -PYTHON_COMPAT=( python2_7 ) - -inherit eutils python-r1 - -DESCRIPTION="PyMOL plugin for convinient movie creation" -SRC_URI="http://www.weizmann.ac.il/ISPC/eMovie_package.zip" -HOMEPAGE="http://www.weizmann.ac.il/ISPC/eMovie.html" - -SLOT="0" -LICENSE="GPL-2" -KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux" -IUSE="" - -REQUIRED_USE="${PYTHON_REQUIRED_USE}" - -RDEPEND="${PYTHON_DEPS} - >sci-chemistry/pymol-0.99[${PYTHON_USEDEP}]" -DEPEND="app-arch/unzip" - -S="${WORKDIR}" - -src_prepare() { - epatch "${FILESDIR}"/${PV}-indent.patch -} - -src_install() { - python_moduleinto pmg_tk/startup - python_foreach_impl python_domodule eMovie.py - python_foreach_impl python_optimize -} diff --git a/sci-chemistry/viewmol/Manifest b/sci-chemistry/viewmol/Manifest deleted file mode 100644 index 64ae88baf763..000000000000 --- a/sci-chemistry/viewmol/Manifest +++ /dev/null @@ -1 +0,0 @@ -DIST viewmol-2.4.1.src.tgz 2229379 BLAKE2B c7d3d9f0a0a728f13be718e2b85a645d1824d2c9efd920a05a0693dfb5904e18da20fcef8080e99f497280effdb71cb21c58d9aeadf49d2477e1c931caa49389 SHA512 42701d570d97e77b84597950a9068dfdf48faf4e551957383c8eea38f082c1ad136c17b7cbd3903673478506116d6fc08d1288842e74d6a9776526c685083584 diff --git a/sci-chemistry/viewmol/files/2.4.1-change-default-paths.patch b/sci-chemistry/viewmol/files/2.4.1-change-default-paths.patch deleted file mode 100644 index 4b1edef7ef8b..000000000000 --- a/sci-chemistry/viewmol/files/2.4.1-change-default-paths.patch +++ /dev/null @@ -1,68 +0,0 @@ -diff --git a/source/getrc.c b/source/getrc.c -index a39b436..c130096 100644 ---- a/getrc.c -+++ b/getrc.c -@@ -87,7 +87,7 @@ extern XtAppContext app; - - static char viewmolpath[MAXLENLINE]; - --#define DEFAULTPATH "/usr/local/lib/viewmol" -+#define DEFAULTPATH "@GENTOO_PORTAGE_EPREFIX@/usr/GENTOOLIBDIR/viewmol" - - int getrc(void) - { -diff --git a/source/install b/source/install -index 580865b..f136af3 100755 ---- a/install -+++ b/install -@@ -54,24 +54,27 @@ fi - cp $dirorig/viewmol $ROOT/bin - chmod 711 $ROOT/bin/viewmol - --# install other files needed in $ROOT/lib/viewmol --if [ ! -d $ROOT/lib/viewmol/$dir ] -+# install other files needed in $ROOT/GENTOOLIBDIR/viewmol -+if [ ! -d $ROOT/GENTOOLIBDIR/viewmol/$dir ] - then -- mkdir -p $ROOT/lib/viewmol/$dir -- chmod 755 $ROOT/lib/viewmol/$dir -+ mkdir -p $ROOT/GENTOOLIBDIR/viewmol/$dir -+ chmod 755 $ROOT/GENTOOLIBDIR/viewmol/$dir - fi - cd $dirorig --cp tm bio readgamess readgauss readmopac readpdb $ROOT/lib/viewmol/$dir --chmod 711 $ROOT/lib/viewmol/$dir/* -+cp tm bio readgamess readgauss readmopac readpdb $ROOT/GENTOOLIBDIR/viewmol/$dir -+chmod 711 $ROOT/GENTOOLIBDIR/viewmol/$dir/* - cd ../.. --cp readdmol readdmol.awk readgulp readpqs writecar writegauss.py writemol writetm $ROOT/lib/viewmol --chmod 755 $ROOT/lib/viewmol/* --cp -r doc examples locale scripts tests $ROOT/lib/viewmol --find $ROOT/lib/viewmol -type f -exec chmod a+r {} \; --find $ROOT/lib/viewmol -type d -exec chmod a+rx {} \; --sed 's/\/source//g' viewmolrc > $ROOT/lib/viewmol/viewmolrc --chmod -R 644 $ROOT/lib/viewmol/viewmolrc --if [ -d /usr/X11R6/lib/X11/app-defaults ] -+cp readdmol readdmol.awk readgulp readpqs writecar writegauss.py writemol writetm $ROOT/GENTOOLIBDIR/viewmol -+chmod 755 $ROOT/GENTOOLIBDIR/viewmol/* -+mkdir -p $ROOT/usr/share/viewmol $ROOT/usr/share/doc/GENTOODOCDIR/ $ROOT/GENTOOLIBDIR/viewmol/ -+cp -r examples scripts tests $ROOT/usr/share/viewmol -+cp -r locale $ROOT/GENTOOLIBDIR/viewmol/ -+cp -r doc/* examples scripts tests $ROOT/usr/share/doc/GENTOODOCDIR/ -+find $ROOT/GENTOOLIBDIR/viewmol -type f -exec chmod a+r {} \; -+find $ROOT/GENTOOLIBDIR/viewmol -type d -exec chmod a+rx {} \; -+sed 's/\/source//g' viewmolrc > $ROOT/GENTOOLIBDIR/viewmol/viewmolrc -+chmod -R 644 $ROOT/GENTOOLIBDIR/viewmol/viewmolrc -+if [ -d $ROOT/X11R6/GENTOOLIBDIR/X11/app-defaults ] - then - locale=`echo $LANG | cut -c1-2` - if [ "$locale" = "en" ] -@@ -82,6 +85,6 @@ then - # The C locale is defined by default for rpm builds, overwrite it - locale="en_US" - fi -- cp locale/${locale}/Viewmol /usr/X11R6/lib/X11/app-defaults -- chmod a+r /usr/X11R6/lib/X11/app-defaults/Viewmol -+ cp locale/${locale}/Viewmol ${ROOT}/X11R6/GENTOOLIBDIR/X11/app-defaults -+ chmod a+r ${ROOT}/X11R6/GENTOOLIBDIR/X11/app-defaults/Viewmol - fi diff --git a/sci-chemistry/viewmol/files/2.4.1-remove-icc-check.patch b/sci-chemistry/viewmol/files/2.4.1-remove-icc-check.patch deleted file mode 100644 index fd91e0a5a434..000000000000 --- a/sci-chemistry/viewmol/files/2.4.1-remove-icc-check.patch +++ /dev/null @@ -1,22 +0,0 @@ ---- a/getmachine -+++ b/getmachine -@@ -269,19 +269,11 @@ - makedir - cat ../.config.$os > makefile - use_icc=`type icc 2> /dev/null` -- if [ "$use_icc" = "" ] -- then - findProcessor - echo 'COMPILER=gcc' >> makefile - echo "OPT=-O6 -mcpu=$processor -fomit-frame-pointer -ffast-math -malign-double" >> makefile - echo 'CFLAGS=-Wall -I/usr/X11R6/include -DLINUX -Wno-strict-aliasing' >> makefile - echo "LDFLAGS=$LINKFORSHARED" >> makefile -- else -- echo 'COMPILER=icc' >> makefile -- echo 'OPT=-O2 -ipo' >> makefile -- echo 'CFLAGS=-I/opt/intel/compiler50/ia32/include -I/usr/X11R6/include -DLINUX' >> makefile -- echo "LDFLAGS=$LINKFORSHARED -ipo" >> makefile -- fi - echo 'SCANDIR=' >> makefile - echo 'INCLUDE=$(TIFFINCLUDE) -I$(PNGINCLUDE) -I$(PYTHONINCLUDE)' >> makefile - echo 'LIBRARY=$(LIBTIFF) $(LIBPNG) -L$(LIBPYTHON)' >> makefile diff --git a/sci-chemistry/viewmol/metadata.xml b/sci-chemistry/viewmol/metadata.xml deleted file mode 100644 index 335c7edd503b..000000000000 --- a/sci-chemistry/viewmol/metadata.xml +++ /dev/null @@ -1,11 +0,0 @@ -<?xml version="1.0" encoding="UTF-8"?> -<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> -<pkgmetadata> - <maintainer type="project"> - <email>sci-chemistry@gentoo.org</email> - <name>Gentoo Chemistry Project</name> - </maintainer> - <upstream> - <remote-id type="sourceforge">viewmol</remote-id> - </upstream> -</pkgmetadata> diff --git a/sci-chemistry/viewmol/viewmol-2.4.1-r3.ebuild b/sci-chemistry/viewmol/viewmol-2.4.1-r3.ebuild deleted file mode 100644 index a82367bac3b7..000000000000 --- a/sci-chemistry/viewmol/viewmol-2.4.1-r3.ebuild +++ /dev/null @@ -1,89 +0,0 @@ -# Copyright 1999-2018 Gentoo Foundation -# Distributed under the terms of the GNU General Public License v2 - -EAPI=6 - -PYTHON_COMPAT=( python2_7 ) -PYTHON_REQ_USE="tk(-)" - -inherit prefix python-single-r1 toolchain-funcs - -DESCRIPTION="Open-source graphical front end for computational chemistry programs" -HOMEPAGE="http://viewmol.sourceforge.net/" -SRC_URI="mirror://sourceforge/viewmol/${P}.src.tgz" - -LICENSE="GPL-2" -SLOT="0" -KEYWORDS="~amd64 ~x86" -IUSE="" -REQUIRED_USE="${PYTHON_REQUIRED_USE}" - -RDEPEND=" - media-libs/libpng:0= - media-libs/tiff:0 - virtual/glu - virtual/opengl - x11-libs/libX11 - x11-libs/libXi - x11-libs/libXmu - x11-libs/libXt - x11-libs/motif:0 - ${PYTHON_DEPS}" -DEPEND="${RDEPEND} - x11-base/xorg-proto" - -S="${WORKDIR}/${P}/source" - -PATCHES=( - "${FILESDIR}"/${PV}-remove-icc-check.patch - "${FILESDIR}"/${PV}-change-default-paths.patch -) - -src_prepare() { - default - - eprefixify getrc.c - sed "s:GENTOOLIBDIR:$(get_libdir):g" -i install getrc.c || die - sed "s:GENTOODOCDIR:${PF}:g" -i install || die - - mkdir "$(uname -s)" || die - cd "$(uname -s)" || die - - cat >> ".config.$(uname -s)" <<- EOF || die - LIBTIFF = -L"${EPREFIX}/usr/$(get_libdir)" - TIFFINCLUDE = "${EPREFIX}/usr/include" - - LIBPNG = -L"${EPREFIX}/usr/$(get_libdir)" - PNGINCLUDE = "${EPREFIX}/usr/include" - - PYTHONVERSION = ${EPYTHON} - PYTHONINCLUDE = $(python_get_CFLAGS) - PYTHONLIB = $(python_get_LIBS) - - COMPILER = $(tc-getCC) - CFLAGS = ${CFLAGS} -DLINUX - LDFLAGS = ${LDFLAGS} - SCANDIR= - INCLUDE=\$(TIFFINCLUDE) -I\$(PNGINCLUDE) \$(PYTHONINCLUDE) - LIBRARY=\$(LIBTIFF) \$(LIBPNG) \$(PYTHONLIB) - LIBS=-L"${EPREFIX}/usr/$(get_libdir)" -ltiff -lpng -lz -lGLU -lGL -L"${EPREFIX}/usr/X11R6/lib" -lXm -lXmu -lXp -lXi -lXext -lXt -lX11 -lpthread -lutil -ldl -lm - EOF - - cp .config.$(uname -s) makefile || die - cat ../Makefile >> makefile || die -} - -src_compile() { - emake -C "$(uname -s)" viewmol_ tm_ bio_ readgamess_ readgauss_ readmopac_ readpdb_ - "${EPREFIX}"/bin/bash makeTranslations || die -} - -src_install() { - ./install "${ED%/}"/usr || die - - # fix broken layout - mv "${ED%/}"/usr/{usr/share,} || die - rm -rf "${ED%/}"/usr/usr || die - mv "${ED%/}"/usr/{$(get_libdir)/${PN}/locale,share} || die - mv "${ED%/}"/usr/{$(get_libdir),libexec} || die -} |