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* sci-biology/VarScan: fix misplaced weak blockerAndrew Ammerlaan2023-02-101-2/+4
| | | | Signed-off-by: Andrew Ammerlaan <andrewammerlaan@gentoo.org>
* sci-biology/VarScan: EAPI bump, vers bump, fix fetchAndrew Ammerlaan2021-03-053-42/+4
| | | | | Package-Manager: Portage-3.0.16, Repoman-3.0.2 Signed-off-by: Andrew Ammerlaan <andrewammerlaan@riseup.net>
* Update Manifests to new hashesJustin Lecher2017-12-101-1/+1
| | | | Signed-off-by: Justin Lecher <jlec@gentoo.org>
* Consistently ident with tabsJustin Lecher2017-11-181-9/+9
| | | | Signed-off-by: Justin Lecher <jlec@gentoo.org>
* Cleanup remote IDsJustin Lecher2017-04-301-1/+1
| | | | Signed-off-by: Justin Lecher <jlec@gentoo.org>
* Update remote idsJustin Lecher2017-04-291-1/+2
| | | | Signed-off-by: Justin Lecher <jlec@gentoo.org>
* sci-biology/VarScan: add RDEPEND on bam-readcountMartin Mokrejš2017-04-142-3/+5
| | | | Package-Manager: Portage-2.3.5, Repoman-2.3.2
* Drop leftover from CVS in HEADERJustin Lecher2017-02-252-2/+0
| | | | Signed-off-by: Justin Lecher <jlec@gentoo.org>
* sci-biology/VarScan: version bumpMartin Mokrejš2017-02-202-0/+36
| | | | Package-Manager: Portage-2.3.3, Repoman-2.3.1
* sci-biology/VarScan: install upstream jar with *.java and *.class filesMartin Mokrejš2016-11-152-5/+11
| | | | Package-Manager: portage-2.3.2
* Revert "sci-biology/VarScan: remove a package skeleton, no sources available"Martin Mokrejš2016-11-153-0/+42
| | | | This reverts commit 6911112e32296b390cdd2bda69aba1ae426a2031.
* sci-biology/VarScan: remove a package skeleton, no sources availableMartin Mokrejš2016-11-153-42/+0
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* metadata.xml: Set typeJustin Lecher2016-01-251-1/+1
| | | | Signed-off-by: Justin Lecher <jlec@gentoo.org>
* metadata.xml: convert hard -> projJustin Lecher2016-01-251-1/+4
| | | | Signed-off-by: Justin Lecher <jlec@gentoo.org>
* matadata.xml: Pre CleanupJustin Lecher2016-01-251-1/+1
| | | | Signed-off-by: Justin Lecher <jlec@gentoo.org>
* Drop ChangeLogs in favour of commit messagesJustin Lecher2016-01-071-16/+0
| | | | Signed-off-by: Justin Lecher <jlec@gentoo.org>
* Add missing remote-ids to metadataJustin Lecher2015-09-301-1/+4
| | | | Signed-off-by: Justin Lecher <jlec@gentoo.org>
* Convert all $Header$ to $Id$ tags as it has be done in gentoo.gitJustin Lecher2015-08-172-2/+2
| | | | Signed-off-by: Justin Lecher <jlec@gentoo.org>
* Revert "Gentoo does https by default now"Justin Lecher2015-06-211-1/+1
| | | | This reverts commit 98718494343af4990facdefb0033471686e975a6.
* Gentoo does https by default nowJustin Lecher2015-06-211-1/+1
| | | | Signed-off-by: Justin Lecher <jlec@gentoo.org>
* fix SRC_URI to fetch real source code, ebuild improvements but not workingMartin Mokrejš2015-03-133-4/+19
| | | | Package-Manager: portage-2.2.15
* sci-biology/VarScan: fix SLOT operatorsJustin Lecher2015-02-183-7/+10
| | | | Package-Manager: portage-2.2.17
* fixed DESCRIPTIONChristoph Junghans2014-09-162-1/+7
| | | | Package-Manager: portage-2.2.8-r1
* sci-biology/VarScan: add Non-profit-OSL-3.0 license and metadata.xmlJauhien Piatlicki2014-09-051-0/+5
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* sci-biology/VarScan: a new package with some classes and no INSTALL docs, ↵Martin Mokrejš2014-03-232-0/+23
needs help from java team for sure