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| author |   Donnie Berkholz <dberkholz@gentoo.org> | 2010-04-23 19:02:42 -0500 |
|---|---|---|
| committer | Donnie Berkholz <dberkholz@gentoo.org> | 2010-04-23 19:02:42 -0500 |
| commit | 768a9e3d9a7bb4cbacd25f70949f3d17dc3a0e0b (patch) | |
| tree | c28e8dea4d2ba214f0ecf48f81f115cc41821b46 /dev-python | |
| parent | namd: rename 2.7 in tree to 2.7_beta1, bump to 2.7_beta2. (diff) | |
| download | dberkholz-768a9e3d9a7bb4cbacd25f70949f3d17dc3a0e0b.tar.gz dberkholz-768a9e3d9a7bb4cbacd25f70949f3d17dc3a0e0b.tar.bz2 dberkholz-768a9e3d9a7bb4cbacd25f70949f3d17dc3a0e0b.zip | |
Add pycogent: a genome biology package.
PyCogent is a software library for genomic biology, including sequence
alignments, phylogeny, clustering, etc.
Diffstat (limited to 'dev-python')
| -rw-r--r-- | dev-python/pycogent/Manifest | 2 | ||||
| -rw-r--r-- | dev-python/pycogent/pycogent-1.4.1.ebuild | 32 |
2 files changed, 34 insertions, 0 deletions
diff --git a/dev-python/pycogent/Manifest b/dev-python/pycogent/Manifest new file mode 100644 index 0000000..8173a34 --- /dev/null +++ b/dev-python/pycogent/Manifest @@ -0,0 +1,2 @@ +DIST PyCogent-1.4.1.tgz 2596901 RMD160 4f53d6ab94bab37c0000e5152b08a43c057cd6b2 SHA1 33a56900b44468b50b5489f33a1bf65baedc70ea SHA256 4f0275c7b97e22b8a8286e8c5831599871f66bcf6bbb8f2dd70d3e300df3a217 +EBUILD pycogent-1.4.1.ebuild 864 RMD160 fe0865e092d92f3d176e63e72d888244b9830621 SHA1 0e8f7e8c9936564f7998bb232af6d6256c9d11cc SHA256 23b9bcb819218612158b4a216ba3e5f42fc57f4e28e4a29de35dd8e40af88a72 diff --git a/dev-python/pycogent/pycogent-1.4.1.ebuild b/dev-python/pycogent/pycogent-1.4.1.ebuild new file mode 100644 index 0000000..b66cec7 --- /dev/null +++ b/dev-python/pycogent/pycogent-1.4.1.ebuild @@ -0,0 +1,32 @@ +# Copyright 1999-2010 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Header: $ + +inherit distutils + +MY_PN="PyCogent" +MY_P=${MY_PN}-${PV} + +DESCRIPTION="A software library for genomic biology, including sequence alignments, phylogeny, clustering, etc." +HOMEPAGE="http://pycogent.sourceforge.net/" +#SRC_URI="mirror://sourceforge/${MY_PN}/${PV}/${MY_P}.tgz" +SRC_URI="mirror://sourceforge/${PN}/${PV}/${MY_P}.tgz" +LICENSE="GPL-2" +SLOT="0" +KEYWORDS="~amd64" +IUSE="" +RDEPEND=" + >=dev-python/numpy-1.3 + dev-python/matplotlib + >=dev-python/mpi4py-1.0 + >=dev-python/sqlalchemy-0.5 + >=dev-python/mysql-python-1.2.2 +" +DEPEND="${RDEPEND}" +S=${WORKDIR}/${MY_P} + +src_test() { + # For me, I get FAILED (failures=2, errors=18). + elog "If you get 2 failures and 18 errors, you're doing as good as me. Disable the test." + sh run_tests || die +} |