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# Copyright 1999-2012 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/aqua/aqua-3.2-r2.ebuild,v 1.5 2012/10/19 09:38:53 jlec Exp $
EAPI=4
inherit eutils fortran-2 toolchain-funcs
DESCRIPTION="Program suite in this distribution calculates restraint violations"
HOMEPAGE="http://www.biochem.ucl.ac.uk/~roman/procheck/procheck.html"
SRC_URI="
${PN}${PV}.tar.gz
doc? ( ${P}-nmr_manual.tar.gz )"
SLOT="0"
LICENSE="procheck"
KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux"
IUSE="doc examples"
RDEPEND="sci-chemistry/procheck"
DEPEND=""
RESTRICT="fetch"
S="${WORKDIR}"/${PN}${PV}
pkg_nofetch() {
elog "Please visit http://www.ebi.ac.uk/thornton-srv/software/PROCHECK/download.html"
elog "And follow the instruction for downloading ${PN}${PV}.tar.gz -> ${DISTDIR}/${PN}${PV}.tar.gz."
if use doc; then
elog "nmr_manual.tar.gz -> ${DISTDIR}/${P}-nmr_manual.tar.gz"
fi
}
src_prepare() {
sed \
-e 's:nawk:gawk:g' \
-e "s:/bin/gawk:${EPREFIX}/usr/bin/gawk:g" \
-e "s:/usr/local/bin/perl:${EPREFIX}/usr/bin/perl:g" \
-i $(find . -type f) || die
epatch "${FILESDIR}"/${PV}-flags.patch
}
src_compile() {
pushd src > /dev/null
emake \
MYROOT="${WORKDIR}" \
CC="$(tc-getCC)" \
FC="$(tc-getFC)" \
CFLAGS="${CFLAGS} -I../sub/lib" \
FFLAGS="${FFLAGS}" \
LDFLAGS="${LDFLAGS}" \
exth
emake \
MYROOT="${WORKDIR}" \
CC="$(tc-getCC)" \
FC="$(tc-getFC)" \
CFLAGS="${CFLAGS} -I../sub/lib" \
FFLAGS="${FFLAGS}" \
LDFLAGS="${LDFLAGS}"
popd
}
src_install() {
rm -f scripts/conv* || die
dobin bin/* scripts/*
dosym AquaWhat /usr/bin/qwhat
dosym AquaHow /usr/bin/qhow
dosym AquaPseudo /usr/bin/qpseudo
dosym AquaDist /usr/bin/qdist
dosym AquaCalc /usr/bin/qcalc
dosym AquaAssign /usr/bin/qassign
dosym AquaRedun /usr/bin/qredun
dosym AquaCompl /usr/bin/qcompl
dodoc HISTORY HOW_TO_USE NEW README doc/*
dohtml html/*
insinto /usr/share/${PN}
doins data/*
if use examples; then
doins -r exmpls
fi
if use doc; then
dohtml -r manual
fi
cat >> "${T}"/34aqua <<- EOF
AQUADATADIR="${EPREFIX}/usr/share/${PN}"
EOF
doenvd "${T}"/34aqua
}
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