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Fix build with --as-needed, respect CXX, CXXFLAGS
http://www.mothur.org/forum/viewtopic.php?f=4&t=590
http://bugs.gentoo.org/show_bug.cgi?id=339753
--- makefile
+++ makefile
@@ -11,7 +11,7 @@
# Optimize to level 3:
-CXXFLAGS += -O3
+#CXXFLAGS += -O3
MOTHUR_FILES = "\"Enter_your_default_path_here\""
@@ -49,7 +49,7 @@
ifeq ($(strip $(USEREADLINE)),yes)
CXXFLAGS += -DUSE_READLINE
- LDFLAGS += \
+ LIBS = \
-lreadline\
-lncurses
endif
@@ -57,7 +57,7 @@
USEMPI ?= no
ifeq ($(strip $(USEMPI)),yes)
- CXX = mpic++
+# CXX = mpic++
CXXFLAGS += -DUSE_MPI
endif
@@ -74,7 +74,7 @@
OBJECTS=$(patsubst %.cpp,%.o,$(wildcard *.cpp))
mothur : $(OBJECTS)
- $(CXX) $(LDFLAGS) $(TARGET_ARCH) -o $@ $(OBJECTS)
+ $(CXX) $(LDFLAGS) $(TARGET_ARCH) -o $@ $(OBJECTS) $(LIBS)
install : mothur
cp mothur ../Release/mothur
|
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