diff options
Diffstat (limited to 'sci-biology')
| -rw-r--r-- | sci-biology/aaindex/ChangeLog | 7 | ||||
| -rw-r--r-- | sci-biology/aaindex/aaindex-9.1.ebuild | 39 | ||||
| -rw-r--r-- | sci-biology/aaindex/files/digest-aaindex-9.1 | 3 |
3 files changed, 48 insertions, 1 deletions
diff --git a/sci-biology/aaindex/ChangeLog b/sci-biology/aaindex/ChangeLog index 921bb9e5c6c2..2c78e171f0bb 100644 --- a/sci-biology/aaindex/ChangeLog +++ b/sci-biology/aaindex/ChangeLog @@ -1,6 +1,11 @@ # ChangeLog for sci-biology/aaindex # Copyright 2000-2006 Gentoo Foundation; Distributed under the GPL v2 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/aaindex/ChangeLog,v 1.17 2006/08/18 02:46:19 weeve Exp $ +# $Header: /var/cvsroot/gentoo-x86/sci-biology/aaindex/ChangeLog,v 1.18 2006/09/13 14:07:34 ribosome Exp $ + +*aaindex-9.1 (13 Sep 2006) + + 13 Sep 2006; Olivier Fisette <ribosome@gentoo.org> +aaindex-9.1.ebuild: + New upstream version. 18 Aug 2006; Jason Wever <weeve@gentoo.org> aaindex-7.0.ebuild: Added ~sparc keyword wrt bug #144241. diff --git a/sci-biology/aaindex/aaindex-9.1.ebuild b/sci-biology/aaindex/aaindex-9.1.ebuild new file mode 100644 index 000000000000..0e5cc7bf5b65 --- /dev/null +++ b/sci-biology/aaindex/aaindex-9.1.ebuild @@ -0,0 +1,39 @@ +# Copyright 1999-2006 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Header: /var/cvsroot/gentoo-x86/sci-biology/aaindex/aaindex-9.1.ebuild,v 1.1 2006/09/13 14:07:34 ribosome Exp $ + +DESCRIPTION="Amino acid indices and similarity matrices" +LICENSE="public-domain" +HOMEPAGE="http://www.genome.ad.jp/aaindex" +SRC_URI="mirror://gentoo/${P}.tar.bz2" + +SLOT="0" +# Minimal build keeps only the indexed files (if applicable) and the +# documentation. The non-indexed database is not installed. +IUSE="emboss minimal" +KEYWORDS="~amd64 ~ppc ~ppc-macos ~ppc64 ~sparc ~x86" + +DEPEND="emboss? ( sci-biology/emboss )" + +src_compile() { + if use emboss; then + mkdir AAINDEX + echo + einfo "Indexing AAindex for usage with EMBOSS." + EMBOSS_DATA="." aaindexextract -auto -infile ${PN}1 || die \ + "Indexing AAindex failed." + echo + fi +} + +src_install() { + if ! use minimal; then + insinto /usr/share/${PN} + doins ${PN}{1,2,3} || die "Failed to install raw database." + fi + dodoc ${PN}.doc || die "Failed to install documentation." + if use emboss; then + insinto /usr/share/EMBOSS/data/AAINDEX + doins AAINDEX/* || die "Failed to install EMBOSS data files." + fi +} diff --git a/sci-biology/aaindex/files/digest-aaindex-9.1 b/sci-biology/aaindex/files/digest-aaindex-9.1 new file mode 100644 index 000000000000..0577048a761a --- /dev/null +++ b/sci-biology/aaindex/files/digest-aaindex-9.1 @@ -0,0 +1,3 @@ +MD5 efed99751665ce4f60bcbe890c06520c aaindex-9.1.tar.bz2 133780 +RMD160 6f5bd699de3c84bd366f9747f57712ba8aecf513 aaindex-9.1.tar.bz2 133780 +SHA256 ae2e5aec2fc47835f26c8d8b5776966464bc08a5fca422c130d8312880382caa aaindex-9.1.tar.bz2 133780 |