diff options
Diffstat (limited to 'sci-biology/t-coffee/t-coffee-6.82.ebuild')
-rw-r--r-- | sci-biology/t-coffee/t-coffee-6.82.ebuild | 57 |
1 files changed, 0 insertions, 57 deletions
diff --git a/sci-biology/t-coffee/t-coffee-6.82.ebuild b/sci-biology/t-coffee/t-coffee-6.82.ebuild deleted file mode 100644 index c91b5280abe7..000000000000 --- a/sci-biology/t-coffee/t-coffee-6.82.ebuild +++ /dev/null @@ -1,57 +0,0 @@ -# Copyright 1999-2008 Gentoo Foundation -# Distributed under the terms of the GNU General Public License v2 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/t-coffee/t-coffee-6.82.ebuild,v 1.1 2008/09/06 11:29:59 markusle Exp $ - -inherit toolchain-funcs flag-o-matic - -DESCRIPTION="A multiple sequence alignment package" -LICENSE="GPL-2" -HOMEPAGE="http://www.tcoffee.org/Projects_home_page/t_coffee_home_page.html" -SRC_URI="http://www.tcoffee.org/Packages/T-COFFEE_distribution_Version_${PV}.tar.gz" - -SLOT="0" -IUSE="" -KEYWORDS="~amd64 ~ppc ~x86" - -DEPEND="sci-biology/clustalw" - -TCDIR="${WORKDIR}/T-COFFEE_distribution_Version_${PV}" -S="${TCDIR}/t_coffee_source" - -die_compile() { - echo - eerror "If you experience an internal compiler error (consult the above" - eerror "messages), try compiling t-coffee using very modest compiler flags." - eerror "See bug #114745 on the Gentoo Bugzilla for more details." - die "Compilation failed" -} - -src_compile() { - [[ $(gcc-version) == "3.4" ]] && append-flags -fno-unit-at-a-time - [[ $(gcc-version) == "4.1" ]] && append-flags -fno-unit-at-a-time - CC="$(tc-getCC)" CFLAGS="${CFLAGS}" emake || die_compile -} - -src_install() { - dobin t_coffee || die "Failed to install program." - - insinto /usr/share/${PN}/lib/html - doins "${TCDIR}"/html/* \ - || die "Failed to install Web interface files." - - cd "${TCDIR}"/doc - dodoc aln_compare.doc.txt seq_reformat.doc.txt \ - t_coffee_technical.txt t_coffee_tutorial.txt \ - || die "Failed to install text documentation." - - dohtml t_coffee_technical.htm t_coffee_tutorial.htm \ - || die "Failed to install HTML documentation." - - insinto /usr/share/doc/${PF} - doins t_coffee_technical.doc t_coffee_tutorial.doc \ - || die "Failed to install DOC documentation." - - insinto /usr/share/${PN}/example - doins "${TCDIR}"/example/* \ - || die "Failed to install example files." -} |