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| author |   Jeffrey Gardner <je_fro@gentoo.org> | 2007-05-04 15:39:00 +0000 |
|---|---|---|
| committer | Jeffrey Gardner <je_fro@gentoo.org> | 2007-05-04 15:39:00 +0000 |
| commit | 4ab344b98ed505dbb3ef5999b73571be92ec89a6 (patch) | |
| tree | b8cac306f7a51afc5b0185ba0ed4836851e0756d /sci-chemistry | |
| parent | Stable for HPPA. (diff) | |
| download | gentoo-2-4ab344b98ed505dbb3ef5999b73571be92ec89a6.tar.gz gentoo-2-4ab344b98ed505dbb3ef5999b73571be92ec89a6.tar.bz2 gentoo-2-4ab344b98ed505dbb3ef5999b73571be92ec89a6.zip | |
Adding the forgotten pymol-0.99_rc8-data-path.patch.
(Portage version: 2.1.2.2)
Diffstat (limited to 'sci-chemistry')
| -rw-r--r-- | sci-chemistry/pymol/ChangeLog | 6 | ||||
| -rw-r--r-- | sci-chemistry/pymol/files/pymol-0.99_rc8-data-path.patch | 64 |
2 files changed, 69 insertions, 1 deletions
diff --git a/sci-chemistry/pymol/ChangeLog b/sci-chemistry/pymol/ChangeLog index 4c354a6d8c07..871ad816efa6 100644 --- a/sci-chemistry/pymol/ChangeLog +++ b/sci-chemistry/pymol/ChangeLog @@ -1,6 +1,10 @@ # ChangeLog for sci-chemistry/pymol # Copyright 2002-2007 Gentoo Foundation; Distributed under the GPL v2 -# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/pymol/ChangeLog,v 1.21 2007/05/02 16:52:04 je_fro Exp $ +# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/pymol/ChangeLog,v 1.22 2007/05/04 15:39:00 je_fro Exp $ + + 04 May 2007; Jeff Gardner <je_fro@gentoo.org> + +files/pymol-0.99_rc8-data-path.patch: + Adding the forgotten pymol-0.99_rc8-data-path.patch. *pymol-0.99_rc8 (02 May 2007) diff --git a/sci-chemistry/pymol/files/pymol-0.99_rc8-data-path.patch b/sci-chemistry/pymol/files/pymol-0.99_rc8-data-path.patch new file mode 100644 index 000000000000..286489ff8d58 --- /dev/null +++ b/sci-chemistry/pymol/files/pymol-0.99_rc8-data-path.patch @@ -0,0 +1,64 @@ +--- pymol-0.99rc8/modules/pymol/commanding.py 2007-04-18 02:11:48.000000000 -0400 ++++ commanding.py 2007-04-24 02:17:53.000000000 -0400 +@@ -129,11 +129,11 @@ + unlock(0) + r = DEFAULT_SUCCESS + if show_splash==1: # generic / open-source +- png_path = cmd.exp_path("$PYMOL_PATH/data/pymol/splash.png") ++ png_path = cmd.exp_path("$PYMOL_DATA/pymol/splash.png") + elif show_splash==2: # evaluation builds +- png_path = cmd.exp_path("$PYMOL_PATH/data/pymol/epymol.png") ++ png_path = cmd.exp_path("$PYMOL_DATA/pymol/epymol.png") + else: # incentive builds +- png_path = cmd.exp_path("$PYMOL_PATH/data/pymol/ipymol.png") ++ png_path = cmd.exp_path("$PYMOL_DATA/pymol/ipymol.png") + if os.path.exists(png_path): + cmd.do("_ cmd.load_png('%s',0,quiet=1)"%png_path) + else: +--- pymol-0.99rc8/modules/pymol/fitting.py 2007-04-18 02:11:48.000000000 -0400 ++++ fitting.py 2007-04-24 02:18:07.000000000 -0400 +@@ -61,7 +61,7 @@ + r = DEFAULT_ERROR + source = selector.process(source) + target = selector.process(target) +- mfile = cmd.exp_path("$PYMOL_PATH/data/pymol/matrices/"+matrix) ++ mfile = cmd.exp_path("$PYMOL_DATA/pymol/matrices/"+matrix) + if object==None: object='' + try: + lock() +--- pymol-0.99rc8/modules/pymol/importing.py 2007-04-18 02:11:47.000000000 -0400 ++++ importing.py 2007-04-24 02:18:46.000000000 -0400 +@@ -177,7 +177,7 @@ + r = DEFAULT_ERROR + + +- tables = { 'cmyk' : "$PYMOL_PATH/data/pymol/cmyk.png", ++ tables = { 'cmyk' : "$PYMOL_DATA/pymol/cmyk.png", + 'pymol' : 'pymol', + 'rgb' : 'rgb' } + +--- pymol-0.99rc8/modules/pymol/wizard/mutagenesis.py 2007-04-18 02:11:50.000000000 -0400 ++++ mutagenesis.py 2007-04-24 04:08:44.000000000 -0400 +@@ -35,8 +35,8 @@ + + self.dep = default_dep + +- self.ind_library = io.pkl.fromFile(os.environ['PYMOL_PATH']+ +- "/data/chempy/sidechains/sc_bb_ind.pkl") ++ self.ind_library = io.pkl.fromFile(os.environ['PYMOL_DATA']+ ++ "/chempy/sidechains/sc_bb_ind.pkl") + self.load_library() + self.status = 0 # 0 no selection, 1 mutagenizing + self.bump_check = 1 +@@ -108,8 +108,8 @@ + def load_library(self): + if self.dep == 'dep': + if not hasattr(self,'dep_library'): +- self.dep_library = io.pkl.fromFile(os.environ['PYMOL_PATH']+ +- "/data/chempy/sidechains/sc_bb_dep.pkl") ++ self.dep_library = io.pkl.fromFile(os.environ['PYMOL_DATA']+ ++ "/chempy/sidechains/sc_bb_dep.pkl") + + def set_mode(self,mode): + if mode in self.modes: + |