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authorJustin Lecher <jlec@gentoo.org>2011-06-26 08:32:55 +0000
committerJustin Lecher <jlec@gentoo.org>2011-06-26 08:32:55 +0000
commit0f5f1aeed47434f560b0a9bc3df7f127a7e18c27 (patch)
treec8e12cea69f33e68b8a9cc1fe8b89d9948087dd4 /sci-chemistry
parentStraight out QA issues prior to stabilization (diff)
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migrate from 'git' to 'git-2'
(Portage version: 2.2.0_alpha41/cvs/Linux x86_64)
Diffstat (limited to 'sci-chemistry')
-rw-r--r--sci-chemistry/gromacs/ChangeLog6
-rw-r--r--sci-chemistry/gromacs/gromacs-4.5.4-r1.ebuild25
-rw-r--r--sci-chemistry/gromacs/gromacs-4.5.4-r2.ebuild17
-rw-r--r--sci-chemistry/gromacs/metadata.xml14
4 files changed, 31 insertions, 31 deletions
diff --git a/sci-chemistry/gromacs/ChangeLog b/sci-chemistry/gromacs/ChangeLog
index 6c2edaf8d683..cb2d4394115d 100644
--- a/sci-chemistry/gromacs/ChangeLog
+++ b/sci-chemistry/gromacs/ChangeLog
@@ -1,6 +1,10 @@
# ChangeLog for sci-chemistry/gromacs
# Copyright 1999-2011 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/gromacs/ChangeLog,v 1.90 2011/06/23 10:08:45 ottxor Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/gromacs/ChangeLog,v 1.91 2011/06/26 08:32:55 jlec Exp $
+
+ 26 Jun 2011; Justin Lecher <jlec@gentoo.org> gromacs-4.5.4-r1.ebuild,
+ gromacs-4.5.4-r2.ebuild, metadata.xml:
+ migrate from 'git' to 'git-2'
23 Jun 2011; Christoph Junghans <ottxor@gentoo.org> gromacs-4.5.4-r1.ebuild,
gromacs-4.5.4-r2.ebuild:
diff --git a/sci-chemistry/gromacs/gromacs-4.5.4-r1.ebuild b/sci-chemistry/gromacs/gromacs-4.5.4-r1.ebuild
index ae83d8fc11ab..3578376a52cb 100644
--- a/sci-chemistry/gromacs/gromacs-4.5.4-r1.ebuild
+++ b/sci-chemistry/gromacs/gromacs-4.5.4-r1.ebuild
@@ -1,6 +1,6 @@
# Copyright 1999-2011 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/gromacs/gromacs-4.5.4-r1.ebuild,v 1.9 2011/06/23 10:08:45 ottxor Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/gromacs/gromacs-4.5.4-r1.ebuild,v 1.10 2011/06/26 08:32:55 jlec Exp $
EAPI="4"
@@ -10,24 +10,21 @@ MANUAL_PV="4.5.4"
inherit autotools-utils bash-completion flag-o-matic fortran-2 multilib toolchain-funcs
-SRC_URI="test? ( ftp://ftp.gromacs.org/pub/tests/gmxtest-${TEST_PV}.tgz )
- doc? ( ftp://ftp.gromacs.org/pub/manual/manual-${MANUAL_PV}.pdf -> gromacs-manual-${MANUAL_PV}.pdf )"
-
if [ "${PV%9999}" != "${PV}" ]; then
EGIT_REPO_URI="git://git.gromacs.org/gromacs"
EGIT_BRANCH="release-4-5-patches"
- inherit git
+ inherit git-2
else
SRC_URI="${SRC_URI} ftp://ftp.gromacs.org/pub/${PN}/${P}.tar.gz"
fi
-SRC_URI="${SRC_URI}
- http://dev.gentoo.org/~alexxy/gromacs/0001-Make-stack-non-executable-for-GAS-assembly.patch.gz
- http://dev.gentoo.org/~alexxy/gromacs/0002-Make-stack-non-executable-for-ATT-assembly.patch.gz
- "
-
DESCRIPTION="The ultimate molecular dynamics simulation package"
HOMEPAGE="http://www.gromacs.org/"
+SRC_URI="${SRC_URI}
+ http://dev.gentoo.org/~alexxy/gromacs/0001-Make-stack-non-executable-for-GAS-assembly.patch.gz
+ http://dev.gentoo.org/~alexxy/gromacs/0002-Make-stack-non-executable-for-ATT-assembly.patch.gz
+ doc? ( ftp://ftp.gromacs.org/pub/manual/manual-${MANUAL_PV}.pdf -> gromacs-manual-${MANUAL_PV}.pdf )
+ test? ( ftp://ftp.gromacs.org/pub/tests/gmxtest-${TEST_PV}.tgz )"
LICENSE="GPL-2"
SLOT="0"
@@ -37,13 +34,15 @@ mpi +single-precision sse2 static-libs test +threads +xml zsh-completion"
REQUIRED_USE="fkernels? ( !threads )"
CDEPEND="
- fkernels? ( virtual/fortran )
- X? ( x11-libs/libX11
+ X? (
+ x11-libs/libX11
x11-libs/libSM
- x11-libs/libICE )
+ x11-libs/libICE
+ )
dmalloc? ( dev-libs/dmalloc )
blas? ( virtual/blas )
fftw? ( sci-libs/fftw:3.0 )
+ fkernels? ( virtual/fortran )
gsl? ( sci-libs/gsl )
lapack? ( virtual/lapack )
mpi? ( virtual/mpi )
diff --git a/sci-chemistry/gromacs/gromacs-4.5.4-r2.ebuild b/sci-chemistry/gromacs/gromacs-4.5.4-r2.ebuild
index 5003c502faa6..87f19771f799 100644
--- a/sci-chemistry/gromacs/gromacs-4.5.4-r2.ebuild
+++ b/sci-chemistry/gromacs/gromacs-4.5.4-r2.ebuild
@@ -1,6 +1,6 @@
# Copyright 1999-2011 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/gromacs/gromacs-4.5.4-r2.ebuild,v 1.4 2011/06/23 10:08:45 ottxor Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/gromacs/gromacs-4.5.4-r2.ebuild,v 1.5 2011/06/26 08:32:55 jlec Exp $
EAPI="4"
@@ -9,24 +9,21 @@ MANUAL_PV="4.5.4"
inherit bash-completion cmake-utils eutils fortran-2 multilib toolchain-funcs
-SRC_URI="test? ( ftp://ftp.gromacs.org/pub/tests/gmxtest-${TEST_PV}.tgz )
- doc? ( ftp://ftp.gromacs.org/pub/manual/manual-${MANUAL_PV}.pdf -> gromacs-manual-${MANUAL_PV}.pdf )"
-
if [ "${PV%9999}" != "${PV}" ]; then
EGIT_REPO_URI="git://git.gromacs.org/gromacs"
EGIT_BRANCH="release-4-5-patches"
- inherit git
+ inherit git-2
else
SRC_URI="${SRC_URI} ftp://ftp.gromacs.org/pub/${PN}/${P}.tar.gz"
fi
+DESCRIPTION="The ultimate molecular dynamics simulation package"
+HOMEPAGE="http://www.gromacs.org/"
SRC_URI="${SRC_URI}
http://dev.gentoo.org/~alexxy/gromacs/0001-Make-stack-non-executable-for-GAS-assembly.patch.gz
http://dev.gentoo.org/~alexxy/gromacs/0002-Make-stack-non-executable-for-ATT-assembly.patch.gz
- "
-
-DESCRIPTION="The ultimate molecular dynamics simulation package"
-HOMEPAGE="http://www.gromacs.org/"
+ doc? ( ftp://ftp.gromacs.org/pub/manual/manual-${MANUAL_PV}.pdf -> gromacs-manual-${MANUAL_PV}.pdf )
+ test? ( ftp://ftp.gromacs.org/pub/tests/gmxtest-${TEST_PV}.tgz )"
LICENSE="GPL-2"
SLOT="0"
@@ -36,7 +33,6 @@ mpi +single-precision sse2 test +threads xml zsh-completion"
REQUIRED_USE="fkernels? ( !threads )"
CDEPEND="
- fkernels? ( virtual/fortran )
X? (
x11-libs/libX11
x11-libs/libSM
@@ -44,6 +40,7 @@ CDEPEND="
)
blas? ( virtual/blas )
fftw? ( sci-libs/fftw:3.0 )
+ fkernels? ( virtual/fortran )
gsl? ( sci-libs/gsl )
lapack? ( virtual/lapack )
mpi? ( virtual/mpi )
diff --git a/sci-chemistry/gromacs/metadata.xml b/sci-chemistry/gromacs/metadata.xml
index 1bad52865ce5..ac6daa0746fa 100644
--- a/sci-chemistry/gromacs/metadata.xml
+++ b/sci-chemistry/gromacs/metadata.xml
@@ -1,12 +1,12 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
-<herd>sci-chemistry</herd>
-<use>
- <flag name='dmalloc'>Enable use of Debug Malloc</flag>
- <flag name='double-precision'>More precise calculations at the expense of speed</flag>
- <flag name='fkernels'>Enable building of Fortran Kernels for platforms
+ <herd>sci-chemistry</herd>
+ <use>
+ <flag name="dmalloc">Enable use of Debug Malloc</flag>
+ <flag name="double-precision">More precise calculations at the expense of speed</flag>
+ <flag name="fkernels">Enable building of Fortran Kernels for platforms
that dont have assembly loops</flag>
- <flag name='single-precision'>Single precision version of gromacs</flag>
-</use>
+ <flag name="single-precision">Single precision version of gromacs</flag>
+ </use>
</pkgmetadata>