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authorJustin Lecher <jlec@gentoo.org>2014-10-26 19:12:07 +0000
committerJustin Lecher <jlec@gentoo.org>2014-10-26 19:12:07 +0000
commit08763bde0ac15f0532adf612bd68daf5bc5ffe39 (patch)
tree9ed71b2b21e0996bdb7be53829fd043f6677ac57 /sci-chemistry
parentAdded Prefix keywords, bug #503094 (diff)
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sci-chemistry/freeon: Fix blas/lapakc detection
(Portage version: 2.2.14/cvs/Linux x86_64, signed Manifest commit with key B9D4F231BD1558AB!)
Diffstat (limited to 'sci-chemistry')
-rw-r--r--sci-chemistry/freeon/ChangeLog6
-rw-r--r--sci-chemistry/freeon/files/freeon-1.0.8-blas.patch165
-rw-r--r--sci-chemistry/freeon/freeon-1.0.8-r1.ebuild4
3 files changed, 173 insertions, 2 deletions
diff --git a/sci-chemistry/freeon/ChangeLog b/sci-chemistry/freeon/ChangeLog
index 01f496ffb38b..c90b57da48bb 100644
--- a/sci-chemistry/freeon/ChangeLog
+++ b/sci-chemistry/freeon/ChangeLog
@@ -1,6 +1,10 @@
# ChangeLog for sci-chemistry/freeon
# Copyright 1999-2014 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/freeon/ChangeLog,v 1.2 2014/08/10 20:28:32 slyfox Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/freeon/ChangeLog,v 1.3 2014/10/26 19:12:07 jlec Exp $
+
+ 26 Oct 2014; Justin Lecher <jlec@gentoo.org> freeon-1.0.8-r1.ebuild,
+ +files/freeon-1.0.8-blas.patch:
+ Fix blas/lapakc detection
10 Aug 2014; Sergei Trofimovich <slyfox@gentoo.org> freeon-1.0.8-r1.ebuild:
QA: drop trailing '.' from DESCRIPTION
diff --git a/sci-chemistry/freeon/files/freeon-1.0.8-blas.patch b/sci-chemistry/freeon/files/freeon-1.0.8-blas.patch
new file mode 100644
index 000000000000..46fca7fa2a52
--- /dev/null
+++ b/sci-chemistry/freeon/files/freeon-1.0.8-blas.patch
@@ -0,0 +1,165 @@
+ FreeON/Makefile.am | 2 +-
+ HiCu/Makefile.am | 2 +-
+ ONX/Makefile.am | 1 +
+ OneE/Makefile.am | 2 +-
+ QCTC/Makefile.am | 2 +-
+ SCFeqs/Makefile.am | 2 +-
+ configure.ac | 12 ++++++++----
+ make.inc | 2 +-
+ tests/Makefile.am | 8 ++++----
+ tools/Makefile.am | 2 +-
+ 10 files changed, 20 insertions(+), 15 deletions(-)
+
+diff --git a/FreeON/Makefile.am b/FreeON/Makefile.am
+index 18e0283..12db056 100644
+--- a/FreeON/Makefile.am
++++ b/FreeON/Makefile.am
+@@ -50,7 +50,7 @@ FreeON_DEPENDENCIES = $(LIBRARY_DEPENDENCY_FILES)
+
+ SOURCES_DEPCHECK = $(FreeON_SOURCES)
+
+-FreeON_LDADD = $(LDADD_MODULES)
++FreeON_LDADD = $(LDADD_MODULES) $(LAPACK_LIBS)
+
+ AM_CPPFLAGS += \
+ -DFREEON_BASISSETS=\"$(datadir)/$(PACKAGE)/BasisSets\" \
+diff --git a/HiCu/Makefile.am b/HiCu/Makefile.am
+index 1847354..cc4ebef 100644
+--- a/HiCu/Makefile.am
++++ b/HiCu/Makefile.am
+@@ -27,7 +27,7 @@ EXTRA_DIST = \
+ MMA/CubeRules/RuleD.Inc \
+ MMA/CubeRules/RuleE.Inc
+
+-LDADD = $(LDADD_MODULES)
++LDADD = $(LDADD_MODULES) $(LAPACK_LIBS)
+
+ EXTRA_INCLUDES = -I$(top_srcdir)/Modules/MMA/Functionals
+ AM_CPPFLAGS += -DRULE7 -DEXPLICIT_SOURCE
+diff --git a/ONX/Makefile.am b/ONX/Makefile.am
+index 4d25029..b27b149 100644
+--- a/ONX/Makefile.am
++++ b/ONX/Makefile.am
+@@ -61,6 +61,7 @@ EXTRA_INCLUDES = \
+
+ LDADD = \
+ $(LDADD_MODULES) \
++ $(LAPACK_LIBS) \
+ $(builddir)/../TwoE/libfreeonTwoE.la
+
+ # In case we have ctags installed, make the necessary tags files.
+diff --git a/OneE/Makefile.am b/OneE/Makefile.am
+index 784bede..ea86ae7 100644
+--- a/OneE/Makefile.am
++++ b/OneE/Makefile.am
+@@ -46,7 +46,7 @@ EXTRA_DIST = \
+ MMA/QQuad32.Inc \
+ MMA/QQuad64.Inc
+
+-LDADD = $(LDADD_MODULES)
++LDADD = $(LDADD_MODULES) $(LAPACK_LIBS)
+
+ EXTRA_INCLUDES = -I$(srcdir)/MMA
+
+diff --git a/QCTC/Makefile.am b/QCTC/Makefile.am
+index 3ec39f0..53c358c 100644
+--- a/QCTC/Makefile.am
++++ b/QCTC/Makefile.am
+@@ -105,7 +105,7 @@ EXTRA_DIST = \
+ PBCTensor/Majik_Kubic_WS2.Inc
+
+ EXTRA_INCLUDES = -I$(top_builddir)/OneE -I$(top_srcdir)/Modules/MMA/LookUpTables_800_6x
+-LDADD = $(LDADD_MODULES) libktrax.la
++LDADD = $(LDADD_MODULES) libktrax.la $(LAPACK_LIBS)
+
+ # In case we have ctags installed, make the necessary tags files.
+ .PHONY : tags
+diff --git a/SCFeqs/Makefile.am b/SCFeqs/Makefile.am
+index 2ee640f..709f220 100644
+--- a/SCFeqs/Makefile.am
++++ b/SCFeqs/Makefile.am
+@@ -57,7 +57,7 @@ SOURCES_DEPCHECK = \
+ $(P2Use_SOURCES) \
+ $(DIIS_SOURCES)
+
+-LDADD = $(LDADD_MODULES)
++LDADD = $(LDADD_MODULES) $(LAPACK_LIBS)
+
+ # In case we have ctags installed, make the necessary tags files.
+ .PHONY : tags
+diff --git a/configure.ac b/configure.ac
+index e0c6a77..726c880 100644
+--- a/configure.ac
++++ b/configure.ac
+@@ -784,12 +784,16 @@ END PROGRAM test_compiler
+ you use a version >= 4.2.0])])
+
+ # Check for BLAS.
+-AC_SEARCH_LIBS([dgemm], [blas], [],
+- [AC_MSG_FAILURE([specify the location of dgemm()])])
++PKG_CHECK_MODULES([BLAS],[blas],[],
++ AC_SEARCH_LIBS([dgemm], [blas], [],
++ [AC_MSG_FAILURE([specify the location of dgemm()])])
++ )
+
+ # Check for LAPACK.
+-AC_SEARCH_LIBS([dsyev], [lapack], [],
+- [AC_MSG_FAILURE([specify the library that contains dsyev()])])
++PKG_CHECK_MODULES([LAPACK],[lapack],[],
++ AC_SEARCH_LIBS([dsyev], [lapack], [],
++ [AC_MSG_FAILURE([specify the library that contains dsyev()])])
++ )
+
+ AC_ARG_VAR([H5CC], [h5cc compiler wrapper command])
+
+diff --git a/make.inc b/make.inc
+index cf35e40..5766ff9 100644
+--- a/make.inc
++++ b/make.inc
+@@ -9,7 +9,7 @@ AM_CPPFLAGS = @AM_CPPFLAGS@
+ # Fix for bug in autoconf-2.59
+ builddir = .
+
+-LDADD_MODULES = $(top_builddir)/Modules/libfreeonmodules.la
++LDADD_MODULES = $(top_builddir)/Modules/libfreeonmodules.la $(LAPACK_MODULES)
+
+ # On filesystems which are case-insensitive (which really means HFS+ on OS X)
+ # we can not preprocess into a filename that differs by the case only, i.e. .C
+diff --git a/tests/Makefile.am b/tests/Makefile.am
+index 6bd89f2..ae9da60 100644
+--- a/tests/Makefile.am
++++ b/tests/Makefile.am
+@@ -7,16 +7,16 @@ noinst_PROGRAMS = \
+ sendReceive_HGRho
+
+ sleeper_SOURCES = sleeper.F90
+-sleeper_LDADD = $(LDADD_MODULES)
++sleeper_LDADD = $(LDADD_MODULES) $(LAPACK_LIBS)
+
+ lock_SOURCES = lock.F90
+-lock_LDADD = $(LDADD_MODULES)
++lock_LDADD = $(LDADD_MODULES) $(LAPACK_LIBS)
+
+ sendReceive_DBL_RNK2_SOURCES = sendReceive_DBL_RNK2.F90
+-sendReceive_DBL_RNK2_LDADD = $(LDADD_MODULES)
++sendReceive_DBL_RNK2_LDADD = $(LDADD_MODULES) $(LAPACK_LIBS)
+
+ sendReceive_HGRho_SOURCES = sendReceive_HGRho.F90
+-sendReceive_HGRho_LDADD = $(LDADD_MODULES)
++sendReceive_HGRho_LDADD = $(LDADD_MODULES) $(LAPACK_LIBS)
+
+ if HAVE_MPIRUN
+ MPI_TESTS = locktest
+diff --git a/tools/Makefile.am b/tools/Makefile.am
+index e0baaff..a6b18b2 100644
+--- a/tools/Makefile.am
++++ b/tools/Makefile.am
+@@ -19,7 +19,7 @@ python_PYTHON = \
+ bin_PROGRAMS = printBCSR convertBCSR
+
+ printBCSR_SOURCES = printBCSR.F90
+-printBCSR_LDADD = $(top_builddir)/Modules/libfreeonmodules.la
++printBCSR_LDADD = $(top_builddir)/Modules/libfreeonmodules.la $(LAPACK_LIBS)
+
+ convertBCSR_SOURCES = \
+ convertBCSR.cc \
diff --git a/sci-chemistry/freeon/freeon-1.0.8-r1.ebuild b/sci-chemistry/freeon/freeon-1.0.8-r1.ebuild
index f63e1b1a0f29..e8f20fb85450 100644
--- a/sci-chemistry/freeon/freeon-1.0.8-r1.ebuild
+++ b/sci-chemistry/freeon/freeon-1.0.8-r1.ebuild
@@ -1,6 +1,6 @@
# Copyright 1999-2014 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/freeon/freeon-1.0.8-r1.ebuild,v 1.2 2014/08/10 20:28:32 slyfox Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/freeon/freeon-1.0.8-r1.ebuild,v 1.3 2014/10/26 19:12:07 jlec Exp $
EAPI=5
@@ -25,3 +25,5 @@ RDEPEND="
virtual/lapack"
DEPEND="${RDEPEND}
${PYTHON_DEPS}"
+
+PATCHES=( "${FILESDIR}"/${P}-blas.patch )