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| author |   Justin Lecher <jlec@gentoo.org> | 2010-05-18 11:43:46 +0000 |
|---|---|---|
| committer | Justin Lecher <jlec@gentoo.org> | 2010-05-18 11:43:46 +0000 |
| commit | 74975d8382bce4a08b01d7bdb8cba6e5143741c4 (patch) | |
| tree | 0959d86911a1dff0bb70d15e67c2115838eb96e0 /sci-chemistry/autodock_vina/files | |
| parent | With USE=test, depend on app-emacs/htmlize. Fixes bug 320361. (diff) | |
| download | gentoo-2-74975d8382bce4a08b01d7bdb8cba6e5143741c4.tar.gz gentoo-2-74975d8382bce4a08b01d7bdb8cba6e5143741c4.tar.bz2 gentoo-2-74975d8382bce4a08b01d7bdb8cba6e5143741c4.zip | |
Initial addition of sci-chemistry/autodock_vina
(Portage version: 2.2_rc67/cvs/Linux x86_64)
Diffstat (limited to 'sci-chemistry/autodock_vina/files')
| -rw-r--r-- | sci-chemistry/autodock_vina/files/1.1.1-gentoo.patch | 49 |
1 files changed, 49 insertions, 0 deletions
diff --git a/sci-chemistry/autodock_vina/files/1.1.1-gentoo.patch b/sci-chemistry/autodock_vina/files/1.1.1-gentoo.patch new file mode 100644 index 000000000000..5b24b4cbc488 --- /dev/null +++ b/sci-chemistry/autodock_vina/files/1.1.1-gentoo.patch @@ -0,0 +1,49 @@ +diff --git a/build/linux/debug/Makefile b/build/linux/debug/Makefile +index d2c2d3b..d1f02e5 100644 +--- a/build/linux/debug/Makefile ++++ b/build/linux/debug/Makefile +@@ -1,6 +1,6 @@ + BASE=/usr/local + BOOST_VERSION=1_41 +-C_PLATFORM=-static-libgcc -pthread ++C_PLATFORM=-pthread + GPP=/usr/bin/g++ + C_OPTIONS= -g + BOOST_LIB_VERSION= +diff --git a/build/linux/release/Makefile b/build/linux/release/Makefile +index bfbcc1e..c9fd630 100644 +--- a/build/linux/release/Makefile ++++ b/build/linux/release/Makefile +@@ -1,6 +1,6 @@ + BASE=/usr/local + BOOST_VERSION=1_41 +-C_PLATFORM=-static-libgcc -pthread ++C_PLATFORM=-pthread + GPP=/usr/bin/g++ + C_OPTIONS= -O3 -DNDEBUG + BOOST_LIB_VERSION= +diff --git a/build/makefile_common b/build/makefile_common +index 885935c..4d5eb0f 100644 +--- a/build/makefile_common ++++ b/build/makefile_common +@@ -1,16 +1,16 @@ +-BOOST_INCLUDE = $(BASE)/include/boost-${BOOST_VERSION} ++BOOST_INCLUDE = $(BASE)/include/boost + + LIBOBJ = cache.o coords.o current_weights.o everything.o grid.o szv_grid.o manifold.o model.o monte_carlo.o mutate.o my_pid.o naive_non_cache.o non_cache.o parallel_mc.o parse_pdbqt.o pdb.o quasi_newton.o quaternion.o random.o ssd.o terms.o weighted_terms.o + MAINOBJ = main.o + SPLITOBJ = split.o + +-INCFLAGS = -I $(BOOST_INCLUDE) ++INCFLAGS = -I$(BOOST_INCLUDE) + + CC = ${GPP} ${C_PLATFORM} -ansi -pedantic -Wno-long-long ${C_OPTIONS} $(INCFLAGS) + +-LDFLAGS = -L$(BASE)/lib -L. ++LDFLAGS += -L. + +-LIBS = -l boost_system${BOOST_LIB_VERSION} -l boost_thread${BOOST_LIB_VERSION} -l boost_serialization${BOOST_LIB_VERSION} -l boost_filesystem${BOOST_LIB_VERSION} -l boost_program_options${BOOST_LIB_VERSION}#-l pthread ++LIBS = -lboost_system -lboost_thread -lboost_serialization -lboost_filesystem -lboost_program_options -lpthread + + .SUFFIXES: .cpp .o + |