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authorAndrey Kislyuk <weaver@gentoo.org>2009-08-18 19:08:02 +0000
committerAndrey Kislyuk <weaver@gentoo.org>2009-08-18 19:08:02 +0000
commitca449868a65170f2f99003fa1a9bbef1c25e8bc5 (patch)
tree00848a37890852d4e309990726b29da1a58fe7de /sci-biology
parentVersion bump. (diff)
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Remove static linking and fix fPIC issues, re-keyword amd64
(Portage version: 2.2_rc30/cvs/Linux x86_64)
Diffstat (limited to 'sci-biology')
-rw-r--r--sci-biology/ncbi-tools++/ChangeLog8
-rw-r--r--sci-biology/ncbi-tools++/ncbi-tools++-2009.05.15-r1.ebuild (renamed from sci-biology/ncbi-tools++/ncbi-tools++-2009.05.15.ebuild)15
2 files changed, 18 insertions, 5 deletions
diff --git a/sci-biology/ncbi-tools++/ChangeLog b/sci-biology/ncbi-tools++/ChangeLog
index 2d130bddd4fb..ad411aea41c7 100644
--- a/sci-biology/ncbi-tools++/ChangeLog
+++ b/sci-biology/ncbi-tools++/ChangeLog
@@ -1,6 +1,12 @@
# ChangeLog for sci-biology/ncbi-tools++
# Copyright 1999-2009 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/ncbi-tools++/ChangeLog,v 1.4 2009/08/10 14:02:36 ssuominen Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/ncbi-tools++/ChangeLog,v 1.5 2009/08/18 19:08:02 weaver Exp $
+
+*ncbi-tools++-2009.05.15-r1 (18 Aug 2009)
+
+ 18 Aug 2009; Andrey Kislyuk <weaver@gentoo.org>
+ -ncbi-tools++-2009.05.15.ebuild, +ncbi-tools++-2009.05.15-r1.ebuild:
+ Remove static linking and fix fPIC issues, re-keyword amd64
10 Aug 2009; Samuli Suominen <ssuominen@gentoo.org>
ncbi-tools++-2009.05.15.ebuild,
diff --git a/sci-biology/ncbi-tools++/ncbi-tools++-2009.05.15.ebuild b/sci-biology/ncbi-tools++/ncbi-tools++-2009.05.15-r1.ebuild
index 618394b380dd..08facfbd1468 100644
--- a/sci-biology/ncbi-tools++/ncbi-tools++-2009.05.15.ebuild
+++ b/sci-biology/ncbi-tools++/ncbi-tools++-2009.05.15-r1.ebuild
@@ -1,6 +1,6 @@
# Copyright 1999-2009 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/ncbi-tools++/ncbi-tools++-2009.05.15.ebuild,v 1.4 2009/08/10 14:02:36 ssuominen Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/ncbi-tools++/ncbi-tools++-2009.05.15-r1.ebuild,v 1.1 2009/08/18 19:08:02 weaver Exp $
EAPI="2"
@@ -18,8 +18,7 @@ LICENSE="public-domain"
SLOT="0"
#IUSE="X unicode opengl gnutls test"
IUSE="sqlite"
-# relocation R_X86_64_32S errors on AMD64
-KEYWORDS="-amd64 ~x86"
+KEYWORDS="~amd64 ~x86"
# wxGTK: must run eselect wxwindows after installing wxgtk or build will fail. Check and abort here.
# dev-libs/xalan-c - problems detecting, api mismatch?
@@ -49,11 +48,19 @@ S="${WORKDIR}/${MY_P}"
src_prepare() {
epatch "${FILESDIR}"/${P}-gcc44.patch
+ sed -i -e 's/-print-file-name=libstdc++.a//' src/build-system/configure
}
src_configure() {
# econf fails
- "${S}"/configure --without-debug --with-bin-release --prefix="${D}"/usr \
+ # --with-bin-release and --without-ftds are workarounds for build system bugs
+ # NB: build system supports ICC
+ "${S}"/configure --without-debug \
+ --with-bin-release \
+ --without-static \
+ --with-dll \
+ --without-ftds \
+ --prefix="${D}"/usr \
--libdir="${D}"/usr/$(get_libdir) \
--with-z="/usr" \
--with-bz2="/usr" \