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| author |   Andrey Kislyuk <weaver@gentoo.org> | 2009-05-02 23:48:39 +0000 |
|---|---|---|
| committer | Andrey Kislyuk <weaver@gentoo.org> | 2009-05-02 23:48:39 +0000 |
| commit | b1b0a0a909b02abfc89ed00c58030096b9da9b26 (patch) | |
| tree | b3545a9a4ce28457363d8be8c501e883f62b3e85 /sci-biology | |
| parent | Version bump, applied patch from bug 266383. (diff) | |
| download | gentoo-2-b1b0a0a909b02abfc89ed00c58030096b9da9b26.tar.gz gentoo-2-b1b0a0a909b02abfc89ed00c58030096b9da9b26.tar.bz2 gentoo-2-b1b0a0a909b02abfc89ed00c58030096b9da9b26.zip | |
Version bump
(Portage version: 2.2_rc30/cvs/Linux x86_64)
Diffstat (limited to 'sci-biology')
| -rw-r--r-- | sci-biology/bowtie/ChangeLog | 7 | ||||
| -rw-r--r-- | sci-biology/bowtie/bowtie-0.9.9.2.ebuild | 29 |
2 files changed, 35 insertions, 1 deletions
diff --git a/sci-biology/bowtie/ChangeLog b/sci-biology/bowtie/ChangeLog index 0d6f6a085e65..1d56efc50429 100644 --- a/sci-biology/bowtie/ChangeLog +++ b/sci-biology/bowtie/ChangeLog @@ -1,6 +1,11 @@ # ChangeLog for sci-biology/bowtie # Copyright 1999-2009 Gentoo Foundation; Distributed under the GPL v2 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/bowtie/ChangeLog,v 1.2 2009/04/23 19:15:58 maekke Exp $ +# $Header: /var/cvsroot/gentoo-x86/sci-biology/bowtie/ChangeLog,v 1.3 2009/05/02 23:48:39 weaver Exp $ + +*bowtie-0.9.9.2 (02 May 2009) + + 02 May 2009; Andrey Kislyuk <weaver@gentoo.org> +bowtie-0.9.9.2.ebuild: + Version bump 23 Apr 2009; Markus Meier <maekke@gentoo.org> bowtie-0.9.9.1: amd64/x86 stable, bug #266869 diff --git a/sci-biology/bowtie/bowtie-0.9.9.2.ebuild b/sci-biology/bowtie/bowtie-0.9.9.2.ebuild new file mode 100644 index 000000000000..cf7feed786d4 --- /dev/null +++ b/sci-biology/bowtie/bowtie-0.9.9.2.ebuild @@ -0,0 +1,29 @@ +# Copyright 1999-2009 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Header: /var/cvsroot/gentoo-x86/sci-biology/bowtie/bowtie-0.9.9.2.ebuild,v 1.1 2009/05/02 23:48:39 weaver Exp $ + +EAPI="2" + +DESCRIPTION="An ultrafast memory-efficient short read aligner" +HOMEPAGE="http://bowtie-bio.sourceforge.net/" +SRC_URI="mirror://sourceforge/bowtie-bio/${P}-src.zip" + +LICENSE="Artistic" +SLOT="0" +IUSE="" +KEYWORDS="~amd64 ~x86" + +DEPEND="app-arch/unzip" +RDEPEND="" + +# NB: Bundles code from Maq (http://maq.sf.net) and the SeqAn library (http://www.seqan.de) + +src_prepare() { + sed -i 's/$(CXX) $(RELEASE_FLAGS)/$(CXX) $(CXXFLAGS) $(RELEASE_FLAGS)/' "${S}/Makefile" || die +} + +src_install() { + dobin bowtie bowtie-* || die + newman MANUAL bowtie.1 + dodoc AUTHORS NEWS TUTORIAL +} |