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authorJustin Lecher <jlec@gentoo.org>2015-01-08 07:35:53 +0000
committerJustin Lecher <jlec@gentoo.org>2015-01-08 07:35:53 +0000
commit43658fc154b31a94f6dbb4139cf8908fd41ec578 (patch)
treefe5e1481b781c8e2f4b3b452c8d8fb8215340e01 /sci-biology
parentVersion bump. (diff)
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sci-biology/cufflinks: Add upper limit for boost dep as forced by upstream, #535716
(Portage version: 2.2.15/cvs/Linux x86_64, signed Manifest commit with key B9D4F231BD1558AB!)
Diffstat (limited to 'sci-biology')
-rw-r--r--sci-biology/cufflinks/ChangeLog8
-rw-r--r--sci-biology/cufflinks/cufflinks-1.3.0-r1.ebuild6
-rw-r--r--sci-biology/cufflinks/cufflinks-2.2.1-r1.ebuild6
-rw-r--r--sci-biology/cufflinks/cufflinks-2.2.1.ebuild5
4 files changed, 16 insertions, 9 deletions
diff --git a/sci-biology/cufflinks/ChangeLog b/sci-biology/cufflinks/ChangeLog
index 044b1c730a93..4fadb5eb84d4 100644
--- a/sci-biology/cufflinks/ChangeLog
+++ b/sci-biology/cufflinks/ChangeLog
@@ -1,6 +1,10 @@
# ChangeLog for sci-biology/cufflinks
-# Copyright 1999-2014 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/cufflinks/ChangeLog,v 1.9 2014/10/02 08:01:05 jlec Exp $
+# Copyright 1999-2015 Gentoo Foundation; Distributed under the GPL v2
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/cufflinks/ChangeLog,v 1.10 2015/01/08 07:35:53 jlec Exp $
+
+ 08 Jan 2015; Justin Lecher <jlec@gentoo.org> cufflinks-1.3.0-r1.ebuild,
+ cufflinks-2.2.1.ebuild, cufflinks-2.2.1-r1.ebuild:
+ Add upper limit for boost dep as forced by upstream, #535716
*cufflinks-2.2.1-r1 (02 Oct 2014)
diff --git a/sci-biology/cufflinks/cufflinks-1.3.0-r1.ebuild b/sci-biology/cufflinks/cufflinks-1.3.0-r1.ebuild
index 4421d989877a..01d9e6780489 100644
--- a/sci-biology/cufflinks/cufflinks-1.3.0-r1.ebuild
+++ b/sci-biology/cufflinks/cufflinks-1.3.0-r1.ebuild
@@ -1,6 +1,6 @@
-# Copyright 1999-2014 Gentoo Foundation
+# Copyright 1999-2015 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/cufflinks/cufflinks-1.3.0-r1.ebuild,v 1.2 2014/09/25 15:21:35 jlec Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/cufflinks/cufflinks-1.3.0-r1.ebuild,v 1.3 2015/01/08 07:35:53 jlec Exp $
EAPI=5
@@ -20,7 +20,7 @@ KEYWORDS="~amd64 ~x86"
DEPEND="
>=sci-biology/samtools-0.1.18
<sci-biology/samtools-1
- dev-libs/boost:="
+ <dev-libs/boost-1.56:="
RDEPEND="${DEPEND}"
PATCHES=(
diff --git a/sci-biology/cufflinks/cufflinks-2.2.1-r1.ebuild b/sci-biology/cufflinks/cufflinks-2.2.1-r1.ebuild
index e6e79a3c9df0..836a94933453 100644
--- a/sci-biology/cufflinks/cufflinks-2.2.1-r1.ebuild
+++ b/sci-biology/cufflinks/cufflinks-2.2.1-r1.ebuild
@@ -1,6 +1,6 @@
-# Copyright 1999-2014 Gentoo Foundation
+# Copyright 1999-2015 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/cufflinks/cufflinks-2.2.1-r1.ebuild,v 1.1 2014/10/02 08:01:05 jlec Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/cufflinks/cufflinks-2.2.1-r1.ebuild,v 1.2 2015/01/08 07:35:53 jlec Exp $
EAPI=5
@@ -26,6 +26,7 @@ DEPEND="
<sci-biology/samtools-1
)
>=dev-libs/boost-1.47.0:=
+ <dev-libs/boost-1.56.0:=
dev-cpp/eigen:3
"
RDEPEND="${DEPEND}"
@@ -33,6 +34,7 @@ RDEPEND="${DEPEND}"
PATCHES=(
"${FILESDIR}"/${P}-hts.patch
"${FILESDIR}"/${P}-flags.patch
+ "${FILESDIR}"/${P}-boost.patch
)
src_prepare() {
diff --git a/sci-biology/cufflinks/cufflinks-2.2.1.ebuild b/sci-biology/cufflinks/cufflinks-2.2.1.ebuild
index 2c59840e5e83..e880b83ec2e3 100644
--- a/sci-biology/cufflinks/cufflinks-2.2.1.ebuild
+++ b/sci-biology/cufflinks/cufflinks-2.2.1.ebuild
@@ -1,6 +1,6 @@
-# Copyright 1999-2014 Gentoo Foundation
+# Copyright 1999-2015 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/cufflinks/cufflinks-2.2.1.ebuild,v 1.1 2014/09/25 16:11:26 jlec Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/cufflinks/cufflinks-2.2.1.ebuild,v 1.2 2015/01/08 07:35:53 jlec Exp $
EAPI=5
@@ -19,6 +19,7 @@ DEPEND="
>=sci-biology/samtools-0.1.18
<sci-biology/samtools-1
>=dev-libs/boost-1.47.0:=
+ <dev-libs/boost-1.56.0:=
dev-cpp/eigen:3
"
RDEPEND="${DEPEND}"