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| author |   Andrey Kislyuk <weaver@gentoo.org> | 2011-10-02 20:04:57 +0000 |
|---|---|---|
| committer | Andrey Kislyuk <weaver@gentoo.org> | 2011-10-02 20:04:57 +0000 |
| commit | f7ee256644d5cf45c744d3e6e9aa95b8382ade8d (patch) | |
| tree | e50058d5132968efddd72fc5c528b497a981e477 /sci-biology/vcftools | |
| parent | [net-wireless/madwimax] It works on ~arm (tm) (diff) | |
| download | gentoo-2-f7ee256644d5cf45c744d3e6e9aa95b8382ade8d.tar.gz gentoo-2-f7ee256644d5cf45c744d3e6e9aa95b8382ade8d.tar.bz2 gentoo-2-f7ee256644d5cf45c744d3e6e9aa95b8382ade8d.zip | |
New package, ebuild written by me
(Portage version: 2.2.0_alpha45/cvs/Linux x86_64)
Diffstat (limited to 'sci-biology/vcftools')
| -rw-r--r-- | sci-biology/vcftools/ChangeLog | 10 | ||||
| -rw-r--r-- | sci-biology/vcftools/metadata.xml | 9 | ||||
| -rw-r--r-- | sci-biology/vcftools/vcftools-0.1.6.ebuild | 32 |
3 files changed, 51 insertions, 0 deletions
diff --git a/sci-biology/vcftools/ChangeLog b/sci-biology/vcftools/ChangeLog new file mode 100644 index 000000000000..6f16022dd050 --- /dev/null +++ b/sci-biology/vcftools/ChangeLog @@ -0,0 +1,10 @@ +# ChangeLog for sci-biology/vcftools +# Copyright 1999-2011 Gentoo Foundation; Distributed under the GPL v2 +# $Header: /var/cvsroot/gentoo-x86/sci-biology/vcftools/ChangeLog,v 1.1 2011/10/02 20:04:57 weaver Exp $ + +*vcftools-0.1.6 (02 Oct 2011) + + 02 Oct 2011; Andrey Kislyuk <weaver@gentoo.org> +vcftools-0.1.6.ebuild, + +metadata.xml: + New package, ebuild written by me + diff --git a/sci-biology/vcftools/metadata.xml b/sci-biology/vcftools/metadata.xml new file mode 100644 index 000000000000..3302123e5718 --- /dev/null +++ b/sci-biology/vcftools/metadata.xml @@ -0,0 +1,9 @@ +<?xml version="1.0" encoding="UTF-8"?> +<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> +<pkgmetadata> + <maintainer> + <email>weaver@gentoo.org</email> + <name>Andrey Kislyuk</name> + </maintainer> + <herd>sci-biology</herd> +</pkgmetadata> diff --git a/sci-biology/vcftools/vcftools-0.1.6.ebuild b/sci-biology/vcftools/vcftools-0.1.6.ebuild new file mode 100644 index 000000000000..e8caa0fb35fc --- /dev/null +++ b/sci-biology/vcftools/vcftools-0.1.6.ebuild @@ -0,0 +1,32 @@ +# Copyright 1999-2011 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Header: /var/cvsroot/gentoo-x86/sci-biology/vcftools/vcftools-0.1.6.ebuild,v 1.1 2011/10/02 20:04:57 weaver Exp $ + +EAPI=4 + +MY_P="${PN}_${PV}" + +DESCRIPTION="Tools for working with VCF (Variant Call Format) files" +HOMEPAGE="http://vcftools.sourceforge.net/" +SRC_URI="mirror://sourceforge/${PN}/${MY_P}.tar.gz" + +LICENSE="GPL-3" +SLOT="0" +KEYWORDS="~x86 ~amd64" +IUSE="" + +S="${WORKDIR}/${MY_P}" + +src_prepare() { + sed -i -e "s/CPPFLAGS =/CPPFLAGS = $CXXFLAGS /" \ + -e "s/LIB =/LIB = $LDFLAGS /" cpp/Makefile || die +} + +src_install(){ + dobin bin/* + insinto /usr/share/${PN}/perl + doins perl/*.pm + exeinto /usr/share/${PN}/perl + doexe perl/{fill,vcf}-* + dodoc README.txt +} |