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authorAndrey Kislyuk <weaver@gentoo.org>2011-07-16 20:37:51 +0000
committerAndrey Kislyuk <weaver@gentoo.org>2011-07-16 20:37:51 +0000
commitfb1db8117656bbd82a83feb305f8a11936530e48 (patch)
tree2a95a591ac7fa0657acb07b0064a8a775cd2c79f /sci-biology/prodigal
parentVersion bump. (diff)
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New package, ebuild written by me
(Portage version: 2.2_rc86/cvs/Linux x86_64)
Diffstat (limited to 'sci-biology/prodigal')
-rw-r--r--sci-biology/prodigal/ChangeLog10
-rw-r--r--sci-biology/prodigal/metadata.xml5
-rw-r--r--sci-biology/prodigal/prodigal-2.50.ebuild30
3 files changed, 45 insertions, 0 deletions
diff --git a/sci-biology/prodigal/ChangeLog b/sci-biology/prodigal/ChangeLog
new file mode 100644
index 000000000000..0a15651fa7d1
--- /dev/null
+++ b/sci-biology/prodigal/ChangeLog
@@ -0,0 +1,10 @@
+# ChangeLog for sci-biology/prodigal
+# Copyright 1999-2011 Gentoo Foundation; Distributed under the GPL v2
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/prodigal/ChangeLog,v 1.1 2011/07/16 20:37:51 weaver Exp $
+
+*prodigal-2.50 (16 Jul 2011)
+
+ 16 Jul 2011; Andrey Kislyuk <weaver@gentoo.org> +prodigal-2.50.ebuild,
+ +metadata.xml:
+ New package, ebuild written by me
+
diff --git a/sci-biology/prodigal/metadata.xml b/sci-biology/prodigal/metadata.xml
new file mode 100644
index 000000000000..d4648212cbad
--- /dev/null
+++ b/sci-biology/prodigal/metadata.xml
@@ -0,0 +1,5 @@
+<?xml version="1.0" encoding="UTF-8"?>
+<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
+<pkgmetadata>
+ <herd>sci-biology</herd>
+</pkgmetadata>
diff --git a/sci-biology/prodigal/prodigal-2.50.ebuild b/sci-biology/prodigal/prodigal-2.50.ebuild
new file mode 100644
index 000000000000..ffc36d65bb34
--- /dev/null
+++ b/sci-biology/prodigal/prodigal-2.50.ebuild
@@ -0,0 +1,30 @@
+# Copyright 1999-2011 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/prodigal/prodigal-2.50.ebuild,v 1.1 2011/07/16 20:37:51 weaver Exp $
+
+EAPI="2"
+
+MY_PV=${PV//./_}
+
+DESCRIPTION="Prokaryotic Dynamic Programming Genefinding Algorithm"
+HOMEPAGE="http://prodigal.ornl.gov/ http://code.google.com/p/prodigal/"
+SRC_URI="http://prodigal.googlecode.com/files/prodigal.v${MY_PV}.tar.gz"
+
+LICENSE="GPL-3"
+SLOT="0"
+KEYWORDS="~amd64"
+IUSE=""
+
+DEPEND=""
+RDEPEND=""
+
+S="${WORKDIR}/prodigal.v${MY_PV}"
+
+src_prepare() {
+ sed -i -e 's/CFLAGS=/CFLAGS+=/' -e 's/LDFLAGS=/LDFLAGS+=/' Makefile || die
+}
+
+src_install() {
+ dobin prodigal
+ dodoc README CHANGES
+}