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| author |   Justin Lecher <jlec@gentoo.org> | 2011-04-14 07:46:28 +0000 |
|---|---|---|
| committer | Justin Lecher <jlec@gentoo.org> | 2011-04-14 07:46:28 +0000 |
| commit | 5cf665f7c3077c38582ffeb02904ee9c9433f4c2 (patch) | |
| tree | de74447615f793c1a51639f4a732a2a0105cc6f6 /sci-biology/maq/maq-0.7.1-r1.ebuild | |
| parent | Version bump. (diff) | |
| download | gentoo-2-5cf665f7c3077c38582ffeb02904ee9c9433f4c2.tar.gz gentoo-2-5cf665f7c3077c38582ffeb02904ee9c9433f4c2.tar.bz2 gentoo-2-5cf665f7c3077c38582ffeb02904ee9c9433f4c2.zip | |
Fix for _FORTIFY_SOURCE indicates presence of overflow, #363537; Don't mix FLAGS
(Portage version: 2.2.0_alpha30/cvs/Linux x86_64)
Diffstat (limited to 'sci-biology/maq/maq-0.7.1-r1.ebuild')
| -rw-r--r-- | sci-biology/maq/maq-0.7.1-r1.ebuild | 36 |
1 files changed, 36 insertions, 0 deletions
diff --git a/sci-biology/maq/maq-0.7.1-r1.ebuild b/sci-biology/maq/maq-0.7.1-r1.ebuild new file mode 100644 index 000000000000..dfcdfff7be40 --- /dev/null +++ b/sci-biology/maq/maq-0.7.1-r1.ebuild @@ -0,0 +1,36 @@ +# Copyright 1999-2011 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Header: /var/cvsroot/gentoo-x86/sci-biology/maq/maq-0.7.1-r1.ebuild,v 1.1 2011/04/14 07:46:27 jlec Exp $ + +EAPI="4" + +inherit autotools eutils + +DESCRIPTION="Mapping and Assembly with Qualities - mapping Solexa and SOLiD reads to reference sequences" +HOMEPAGE="http://maq.sourceforge.net/" +SRC_URI=" + mirror://sourceforge/${PN}/${P}.tar.bz2 + mirror://sourceforge/${PN}/calib-36.dat.gz" + +LICENSE="GPL-3" +SLOT="0" +IUSE="" +KEYWORDS="~amd64 ~x86" + +DEPEND="" +RDEPEND="" + +src_prepare() { + epatch \ + "${FILESDIR}"/${P}-flags.patch \ + "${FILESDIR}"/${P}-bfr-overfl.patch + eautoreconf +} + +src_install() { + default + insinto /usr/share/maq + doins "${WORKDIR}"/*.dat || die + doman maq.1 + dodoc ${PN}.pdf +} |