summaryrefslogtreecommitdiff
diff options
context:
space:
mode:
authorArfrever Frehtes Taifersar Arahesis <arfrever@gentoo.org>2010-12-13 21:28:24 +0000
committerArfrever Frehtes Taifersar Arahesis <arfrever@gentoo.org>2010-12-13 21:28:24 +0000
commit304e24900bd23be137825120031bc70dce605667 (patch)
treeed85a429252fd7d8ce7aeb2d7cf463f6a6772e3b /sci-biology/biopython
parentVersion bump. (diff)
downloadgentoo-2-304e24900bd23be137825120031bc70dce605667.tar.gz
gentoo-2-304e24900bd23be137825120031bc70dce605667.tar.bz2
gentoo-2-304e24900bd23be137825120031bc70dce605667.zip
Delete older ebuilds.
Diffstat (limited to 'sci-biology/biopython')
-rw-r--r--sci-biology/biopython/biopython-1.53.ebuild58
-rw-r--r--sci-biology/biopython/biopython-1.54.ebuild56
2 files changed, 0 insertions, 114 deletions
diff --git a/sci-biology/biopython/biopython-1.53.ebuild b/sci-biology/biopython/biopython-1.53.ebuild
deleted file mode 100644
index e7ac69c1a2ed..000000000000
--- a/sci-biology/biopython/biopython-1.53.ebuild
+++ /dev/null
@@ -1,58 +0,0 @@
-# Copyright 1999-2010 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/biopython/biopython-1.53.ebuild,v 1.5 2010/02/13 19:10:21 armin76 Exp $
-
-EAPI="2"
-SUPPORT_PYTHON_ABIS="1"
-
-inherit base distutils eutils
-
-DESCRIPTION="Biopython - Python modules for computational molecular biology"
-HOMEPAGE="http://www.biopython.org http://pypi.python.org/pypi/biopython"
-SRC_URI="http://www.biopython.org/DIST/${P}.tar.gz"
-
-LICENSE="as-is"
-SLOT="0"
-KEYWORDS="alpha amd64 ppc sparc x86"
-IUSE="mysql postgres"
-
-RDEPEND="dev-python/numpy
- >=dev-python/reportlab-2.0
- mysql? ( dev-python/mysql-python )
- postgres? ( dev-python/psycopg )"
-DEPEND="${RDEPEND}
- sys-devel/flex"
-RESTRICT_PYTHON_ABIS="3.*"
-
-PATCHES=(
- "${FILESDIR}/${PN}-1.51-flex.patch"
-)
-
-DISTUTILS_USE_SEPARATE_SOURCE_DIRECTORIES="1"
-DOCS="CONTRIB DEPRECATED NEWS README"
-PYTHON_MODNAME="Bio BioSQL"
-
-src_compile() {
- distutils_src_compile
-}
-
-src_test() {
- testing() {
- cd Tests
- PYTHONPATH="$(ls -d ../build/lib.*)" "$(PYTHON)" run_tests.py
- }
- python_execute_function -s testing
-}
-
-src_install() {
- distutils_src_install
-
- dodir "/usr/share/doc/${PF}"
- cp -r Doc/* "${D}/usr/share/doc/${PF}/" || \
- die "Failed to install documentation."
- dodir "/usr/share/${PN}"
- rm -f Tests/*.pyc || \
- die "Failed to remove precompiled test files."
- cp -r --preserve=mode Scripts Tests "${D}/usr/share/${PN}/" || \
- die "Failed to install shared files."
-}
diff --git a/sci-biology/biopython/biopython-1.54.ebuild b/sci-biology/biopython/biopython-1.54.ebuild
deleted file mode 100644
index cc058c8b341b..000000000000
--- a/sci-biology/biopython/biopython-1.54.ebuild
+++ /dev/null
@@ -1,56 +0,0 @@
-# Copyright 1999-2010 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/biopython/biopython-1.54.ebuild,v 1.6 2010/10/15 18:50:24 ranger Exp $
-
-EAPI="3"
-PYTHON_DEPEND="2"
-SUPPORT_PYTHON_ABIS="1"
-RESTRICT_PYTHON_ABIS="3.*"
-
-inherit distutils eutils
-
-DESCRIPTION="Biopython - Python modules for computational molecular biology"
-HOMEPAGE="http://www.biopython.org http://pypi.python.org/pypi/biopython"
-SRC_URI="http://www.biopython.org/DIST/${P}.tar.gz"
-
-LICENSE="as-is"
-SLOT="0"
-KEYWORDS="alpha amd64 ppc sparc x86"
-IUSE="mysql postgres"
-
-RDEPEND="dev-python/numpy
- >=dev-python/reportlab-2.0
- mysql? ( dev-python/mysql-python )
- postgres? ( dev-python/psycopg )"
-DEPEND="${RDEPEND}
- sys-devel/flex"
-
-DISTUTILS_USE_SEPARATE_SOURCE_DIRECTORIES="1"
-DOCS="CONTRIB DEPRECATED NEWS README"
-PYTHON_MODNAME="Bio BioSQL"
-
-src_prepare() {
- distutils_src_prepare
- epatch "${FILESDIR}/${PN}-1.51-flex.patch"
-}
-
-src_test() {
- testing() {
- cd Tests
- PYTHONPATH="$(ls -d ../build/lib.*)" "$(PYTHON)" run_tests.py
- }
- python_execute_function --nonfatal -s testing
-}
-
-src_install() {
- distutils_src_install
-
- dodir "/usr/share/doc/${PF}"
- cp -r Doc/* "${D}/usr/share/doc/${PF}/" || \
- die "Failed to install documentation."
- dodir "/usr/share/${PN}"
- rm -f Tests/*.pyc || \
- die "Failed to remove precompiled test files."
- cp -r --preserve=mode Scripts Tests "${D}/usr/share/${PN}/" || \
- die "Failed to install shared files."
-}