Cleanup

(Portage version: 2.2.0_alpha100/cvs/Linux x86_64)

4 files changed, 5 insertions, 100 deletions

diff --git a/dev-perl/Bio-SamTools/Bio-SamTools-1.290.0.ebuild b/dev-perl/Bio-SamTools/Bio-SamTools-1.290.0.ebuild
deleted file mode 100644
index 9a9971717aeb..000000000000
--- a/dev-perl/Bio-SamTools/Bio-SamTools-1.290.0.ebuild
+++ /dev/null
@@ -1,33 +0,0 @@
-# Copyright 1999-2011 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/dev-perl/Bio-SamTools/Bio-SamTools-1.290.0.ebuild,v 1.2 2011/09/25 11:52:27 tove Exp $
-
-EAPI=4
-
-MODULE_AUTHOR=LDS
-MODULE_VERSION=1.29
-inherit perl-module
-
-DESCRIPTION="Read SAM/BAM database files"
-
-SLOT="0"
-KEYWORDS="~amd64 ~x86"
-IUSE=""
-
-RDEPEND="sci-biology/bioperl
-	sci-biology/samtools"
-DEPEND="${RDEPEND}
-	virtual/perl-ExtUtils-CBuilder
-	virtual/perl-Module-Build
-"
-
-SRC_TEST=do
-
-src_prepare() {
-	sed -i -e 's|my $HeaderFile = "bam.h";|my $HeaderFile = "bam/bam.h";|' \
-		-e 's|my $LibFile    = "libbam.a";|my $LibFile    = "libbam.so";|' Build.PL || die
-	sed -i -e 's|#include "bam.h"|#include "bam/bam.h"|' \
-		-e 's|#include "khash.h"|#include "bam/khash.h"|' \
-		-e 's|#include "faidx.h"|#include "bam/faidx.h"|' lib/Bio/DB/Sam.xs || die
-	perl-module_src_prepare
-}
diff --git a/dev-perl/Bio-SamTools/Bio-SamTools-1.300.0.ebuild b/dev-perl/Bio-SamTools/Bio-SamTools-1.300.0.ebuild
deleted file mode 100644
index 208e36db3c0b..000000000000
--- a/dev-perl/Bio-SamTools/Bio-SamTools-1.300.0.ebuild
+++ /dev/null
@@ -1,33 +0,0 @@
-# Copyright 1999-2011 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/dev-perl/Bio-SamTools/Bio-SamTools-1.300.0.ebuild,v 1.2 2011/09/25 11:52:27 tove Exp $
-
-EAPI=4
-
-MODULE_AUTHOR=LDS
-MODULE_VERSION=1.30
-inherit perl-module
-
-DESCRIPTION="Read SAM/BAM database files"
-
-SLOT="0"
-KEYWORDS="~amd64 ~x86"
-IUSE=""
-
-RDEPEND="sci-biology/bioperl
-	sci-biology/samtools"
-DEPEND="${RDEPEND}
-	virtual/perl-ExtUtils-CBuilder
-	virtual/perl-Module-Build
-"
-
-SRC_TEST=do
-
-src_prepare() {
-	sed -i -e 's|my $HeaderFile = "bam.h";|my $HeaderFile = "bam/bam.h";|' \
-		-e 's|my $LibFile    = "libbam.a";|my $LibFile    = "libbam.so";|' Build.PL || die
-	sed -i -e 's|#include "bam.h"|#include "bam/bam.h"|' \
-		-e 's|#include "khash.h"|#include "bam/khash.h"|' \
-		-e 's|#include "faidx.h"|#include "bam/faidx.h"|' lib/Bio/DB/Sam.xs || die
-	perl-module_src_prepare
-}
diff --git a/dev-perl/Bio-SamTools/Bio-SamTools-1.310.0.ebuild b/dev-perl/Bio-SamTools/Bio-SamTools-1.310.0.ebuild
deleted file mode 100644
index 4c38aafc4fab..000000000000
--- a/dev-perl/Bio-SamTools/Bio-SamTools-1.310.0.ebuild
+++ /dev/null
@@ -1,33 +0,0 @@
-# Copyright 1999-2011 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/dev-perl/Bio-SamTools/Bio-SamTools-1.310.0.ebuild,v 1.1 2011/09/25 11:52:27 tove Exp $
-
-EAPI=4
-
-MODULE_AUTHOR=LDS
-MODULE_VERSION=1.31
-inherit perl-module
-
-DESCRIPTION="Read SAM/BAM database files"
-
-SLOT="0"
-KEYWORDS="~amd64 ~x86"
-IUSE=""
-
-RDEPEND="sci-biology/bioperl
-	>=sci-biology/samtools-0.1.16"
-DEPEND="${RDEPEND}
-	virtual/perl-ExtUtils-CBuilder
-	virtual/perl-Module-Build
-"
-
-SRC_TEST=do
-
-src_prepare() {
-	sed -i -e 's|my $HeaderFile = "bam.h";|my $HeaderFile = "bam/bam.h";|' \
-		-e 's|my $LibFile    = "libbam.a";|my $LibFile    = "libbam.so";|' Build.PL || die
-	sed -i -e 's|#include "bam.h"|#include "bam/bam.h"|' \
-		-e 's|#include "khash.h"|#include "bam/khash.h"|' \
-		-e 's|#include "faidx.h"|#include "bam/faidx.h"|' lib/Bio/DB/Sam.xs || die
-	perl-module_src_prepare
-}
diff --git a/dev-perl/Bio-SamTools/ChangeLog b/dev-perl/Bio-SamTools/ChangeLog
index 6366b74535fc..cbf2b77072f8 100644
--- a/dev-perl/Bio-SamTools/ChangeLog
+++ b/dev-perl/Bio-SamTools/ChangeLog
@@ -1,6 +1,10 @@
 # ChangeLog for dev-perl/Bio-SamTools
 # Copyright 1999-2012 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/dev-perl/Bio-SamTools/ChangeLog,v 1.6 2012/02/29 08:57:25 robbat2 Exp $
+# $Header: /var/cvsroot/gentoo-x86/dev-perl/Bio-SamTools/ChangeLog,v 1.7 2012/04/21 19:53:33 tove Exp $
+
+  21 Apr 2012; Torsten Veller <tove@gentoo.org> -Bio-SamTools-1.290.0.ebuild,
+  -Bio-SamTools-1.300.0.ebuild, -Bio-SamTools-1.310.0.ebuild:
+  Cleanup
 
 *Bio-SamTools-1.330.0 (29 Feb 2012)