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authorOlivier Fisette <ribosome@gentoo.org>2004-11-07 20:36:06 +0000
committerOlivier Fisette <ribosome@gentoo.org>2004-11-07 20:36:06 +0000
commitb1963d72a6d6c23f5d66c3e09822a526eee496d2 (patch)
tree9326513e26de5fa05ac35e8a503ee3f70f2bb734 /app-sci
parent"rescan_scsi_bus" >> "rescan_scsi_bus.sh". (Manifest recommit) (diff)
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Removed buggy version. Added 0.1.4 to x86. Set myself as maintainer.
Diffstat (limited to 'app-sci')
-rw-r--r--app-sci/elph/ChangeLog7
-rw-r--r--app-sci/elph/Manifest2
-rw-r--r--app-sci/elph/elph-0.1.2.ebuild29
-rw-r--r--app-sci/elph/elph-0.1.4.ebuild4
-rw-r--r--app-sci/elph/files/digest-elph-0.1.21
-rw-r--r--app-sci/elph/metadata.xml13
6 files changed, 21 insertions, 35 deletions
diff --git a/app-sci/elph/ChangeLog b/app-sci/elph/ChangeLog
index 7b4639772663..e38981a9952b 100644
--- a/app-sci/elph/ChangeLog
+++ b/app-sci/elph/ChangeLog
@@ -1,6 +1,11 @@
# ChangeLog for app-sci/elph
# Copyright 2000-2004 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/app-sci/elph/ChangeLog,v 1.3 2004/10/30 15:45:52 ribosome Exp $
+# $Header: /var/cvsroot/gentoo-x86/app-sci/elph/ChangeLog,v 1.4 2004/11/07 20:36:06 ribosome Exp $
+
+ 07 Nov 2004; Olivier Fisette <ribosome@gentoo.org> metadata.xml,
+ -elph-0.1.2.ebuild, elph-0.1.4.ebuild:
+ Removed buggy version (0.1.2). Added 0.1.4 to x86. Set myself as
+ maintainer. Added long description.
30 Oct 2004; Olivier Fisette <ribosome@gentoo.org> +elph-0.1.4.ebuild
+files/elph-0.1.4-usage.patch :
diff --git a/app-sci/elph/Manifest b/app-sci/elph/Manifest
index 21b4a47d2e57..2bce41026e8b 100644
--- a/app-sci/elph/Manifest
+++ b/app-sci/elph/Manifest
@@ -1,7 +1,7 @@
MD5 d96d76f1560e7cdb6630b0a0f3cda349 elph-0.1.2.ebuild 682
MD5 bb5ad787f0b92cdd93b8ff802aa703f7 elph-0.1.4.ebuild 937
MD5 bf38d96495f083237d947217748f6681 ChangeLog 484
-MD5 8c623e53daafa025137077c6b65815bd metadata.xml 156
+MD5 13040a191bb49af836a11a1727f7841c metadata.xml 610
MD5 75fe098a9b1df66ed55f16b4cfde3922 files/elph-0.1.4-usage.patch 3909
MD5 4a7fdc7d26ff2d8fc72881383ff93fc4 files/digest-elph-0.1.2 61
MD5 170bc1e9213d1c70d75ae92411a3567c files/digest-elph-0.1.4 61
diff --git a/app-sci/elph/elph-0.1.2.ebuild b/app-sci/elph/elph-0.1.2.ebuild
deleted file mode 100644
index f22ee11c236e..000000000000
--- a/app-sci/elph/elph-0.1.2.ebuild
+++ /dev/null
@@ -1,29 +0,0 @@
-# Copyright 1999-2004 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/app-sci/elph/elph-0.1.2.ebuild,v 1.5 2004/06/24 21:57:24 agriffis Exp $
-
-DESCRIPTION="ELPH -- general-purpose Gibbs sampler for finding motifs in a set of DNA or protein sequences"
-HOMEPAGE="http://www.tigr.org/software/ELPH/index.shtml"
-SRC_URI="ftp://ftp.tigr.org/pub/software/ELPH/ELPH-${PV}.tar.gz"
-LICENSE="Artistic"
-
-SLOT="0"
-KEYWORDS="x86"
-IUSE=""
-
-DEPEND=""
-
-S=${WORKDIR}/ELPH/sources
-
-
-src_compile() {
- emake || die
-}
-
-src_install() {
- dodir /usr/bin
- dobin elph
-
- cd ${WORKDIR}/ELPH/
- dodoc COPYRIGHT LICENSE README Readme.ELPH
-}
diff --git a/app-sci/elph/elph-0.1.4.ebuild b/app-sci/elph/elph-0.1.4.ebuild
index 18705c3ce857..721d228383af 100644
--- a/app-sci/elph/elph-0.1.4.ebuild
+++ b/app-sci/elph/elph-0.1.4.ebuild
@@ -1,6 +1,6 @@
# Copyright 1999-2004 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/app-sci/elph/elph-0.1.4.ebuild,v 1.1 2004/10/30 15:45:52 ribosome Exp $
+# $Header: /var/cvsroot/gentoo-x86/app-sci/elph/elph-0.1.4.ebuild,v 1.2 2004/11/07 20:36:06 ribosome Exp $
inherit eutils toolchain-funcs
@@ -10,7 +10,7 @@ SRC_URI="ftp://ftp.tigr.org/pub/software/ELPH/ELPH-${PV}.tar.gz"
LICENSE="Artistic"
SLOT="0"
-KEYWORDS="~x86"
+KEYWORDS="x86"
IUSE=""
S="${WORKDIR}/ELPH/sources"
diff --git a/app-sci/elph/files/digest-elph-0.1.2 b/app-sci/elph/files/digest-elph-0.1.2
deleted file mode 100644
index 4432d5c7f77e..000000000000
--- a/app-sci/elph/files/digest-elph-0.1.2
+++ /dev/null
@@ -1 +0,0 @@
-MD5 52160cdb2e2df6491bc5ece7f05c1502 ELPH-0.1.2.tar.gz 39554
diff --git a/app-sci/elph/metadata.xml b/app-sci/elph/metadata.xml
index b229aec85b8f..ffbf25e2aaae 100644
--- a/app-sci/elph/metadata.xml
+++ b/app-sci/elph/metadata.xml
@@ -1,5 +1,16 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
-<herd>sci</herd>
+ <maintainer>
+ <email>ribosome@gentoo.org</email>
+ <name>Olivier Fisette</name>
+ </maintainer>
+ <herd>sci</herd>
+ <longdescription>
+ ELPH is a general-purpose Gibbs sampler for finding motifs in a set of
+ DNA or protein sequences. The program takes as input a set containing
+ anywhere from a few dozen to thousands of sequences, and searches
+ through them for the most common motif, assuming that each sequence
+ contains one copy of the motif.
+ </longdescription>
</pkgmetadata>